FFCP PHASE1:Mm9::chr8:72520121..72520135,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=234366|HGNC=|UniProt=E9QMN5,Q8CHY6|association_with_transcript=142bp_to_ENSMUST00000065169,NM_001113345,NM_145596,uc009lyg.2,uc009lyh.2,uc009lyi.2_5end|description=CAGE_peak_12_at_Gatad2a_5end|id=chr8:72520121..72520135,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,9.68e-07,32;CL:0002032,9.68e-07,32;CL:0000037,9.68e-07,32;CL:0000837,9.68e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=1.60148847104794,2.44282785347553,5.45999087267443,2.11724947914781,3.00537437967808,1.34303417529512,0.467225281191051,2.58246646883153,2.25261955442667,2.80877431586392,1.02730780935303,0.638177271962691,0.684802919724823,1.66098764596095,0.666219523631325,2.22722794128809,1.39912375625629,2.5236973228659,1.91960207048034,0.42438965179803,2.12608225377674,2.28369187762036,1.30599894569468,1.27993938234725,1.83527424853736,1.72269589234506,0.86152399231815,0.646413698057667,0.570070258369122,1.26015064879965,1.33038306393183,0.635030673459631,1.23012957516914,0,0,0.831173226792462,0.816677425049476,5.4409111995798,5.4693474116666,5.23523743973798,4.70585190424811,4.09827290975067,5.82612423637384,0.503587271902309,0.304130793658544,0.917733760808408,1.56478268869608,1.30815093828268,0.878744730937887,0.58328969722285,1.1198913730029,0,2.85230430298152,1.45072428402269,1.68046899571232,0.771778308107841,1.14613375975503,0.515672092277442,0.404632921719196,0.528990979272033,0,0.338844532069132,2.66788438833342,3.1496490104849,1.97773272513395,1.4209602298922,2.09720077362883,5.37905627450176,0.518448061542388,0.810035629990144,1.05162480675691,0,0.220868540951614,0.244981598429908,0.479227355091182,0.919218786610021,1.10115880999389,0.638436690425939,0.307213066512487,0.263772575460388,0.0914876436024097,1.56274011167028,0.279182999001381,0.56276261003168,0.45839474333043,0.294628585473668,0.569486723196412,0.186399445825301,0.605809546665472,0.982430281388212,3.47837386442013,0,0,0.539703191637817,0,0.448026887097336,0.561777680527007,0.681721290312231,0.779358013808606,0,0.563373679106722,0,0,0,0.865964164044856,1.77351905832569,3.53867111510348,1.25602267690966,2.84831672011889,1.33597925158342,1.04091196059682,1.21786191324856,1.38369298353635,1.3565037649736,1.52865319276416,2.01066546127481,0.247194967734374,0.289198713839823,1.76922110389975,1.29413479957927,2.87093973998512,1.93950101254089,0,0,1.46612694769419,1.02182822083437,4.91242010474273,2.99951365496704,3.04968544975355,0.449371918214468,0,0.376963056338593,0,0,0.41557608911912,0.324482526135515,0.305518091550949,1.49288364732112,1.0108910337347,0.631325567659422,1.17108398666433,0.229902104433473,0.180062129805349,0.150704817835715,0.95251098811859,1.0249097622788,1.21812241927647,0.517406741478031,1.5089759505299,1.13463648100692,1.23165786914764,1.09597866213787,0.556094498451196,1.39300866608867,1.02891068203972,0.796137067273973,2.1066395619397,1.80143534980301,2.27330799516474,1.03562886267751,0.938104239924385,1.08037236876609,0.946978942340841,0.393528463494808,0.925602677324269,0.232533944750408,0.536546802799238,0.700592054203017,0.493679549740441,0.492502392237286,0.648550476366846,0.292399974850665,0.439100230582101,1.34206418760372,0.630869845692382,0.102904612379284,1.32167513193519,1.05780226665418,1.2797295032114,0.928946687441754,0.77320476793256,0.403367049246685,0.444756087689741,0.951128130562796,0.949058123089023,1.64698954724011,1.75934646160189,0.795825888164603,1.55971269695296,0.898819408654221,1.29682829924817,1.7922714592893,1.13800740571849,0.571242563048644,2.25415471346161,0.814605311381257,1.74557238450863,2.10407459670956,1.26473074248515,1.32849133181642,0.941992367048249,1.97435462274881,0.592905254174298,1.16791574001266,1.57247196090562,0.674586337154561,1.62288097110802,0.964708639009667,0.763877555344259,0.287696137450811,0.972811360650212,1.09824565275233,1.43768206527355,0.744281895337007,0.936113019343682,0.757736633841335,0,1.92977408545347,0.923765950833023,0.568474235311454,1.30371981153621,0.678980343100753,0.704070744865506,1.17254380209271,1.6663054862021,2.34160377429359,1.26108115284953,0.664394068946325,2.23236676120482,1.3109065177259,0.863424909329478,1.01254341007058,1.50791283939272,4.89515115436839,0.491764273019036,0.275936746304732,0.321101179975584,0.117211686592203,0.655739781506702,0.757412781613119,2.2085575359138,0.780877488593277,0.861693590931196,2.86762557543062,1.11399337041197,3.67999490025482,3.23848561339915,2.04579100537918,2.37172666767914,0.963963949265421,1.13552068166615,1.06839362200353,0.977321756121456,1.48473110675282,0,2.18502572539483,1.81394134178851,0.943025398779491,0.885905678642318,1.53717573971964,1.80899805217755,0,0.712994756769443,0,1.05418608574999,1.03135543248187,1.02131881726136,1.26042765821917,0.905510786479282,0.857348140126369,1.41872186913819,1.78368817602071,0.658196082408484,1.8267896946876,1.64270195644597,0.8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| ||
|EntrezGene=234366 | |||
|HGNC= | |||
|UniProt=E9QMN5,Q8CHY6 | |||
|association_with_transcript=142bp_to_ENSMUST00000065169,NM_001113345,NM_145596,uc009lyg.2,uc009lyh.2,uc009lyi.2_5end | |||
|description=CAGE_peak_12_at_Gatad2a_5end | |||
|id=chr8:72520121..72520135,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.68e-07,32;CL:0002032,9.68e-07,32;CL:0000037,9.68e-07,32;CL:0000837,9.68e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=1.60148847104794,2.44282785347553,5.45999087267443,2.11724947914781,3.00537437967808,1.34303417529512,0.467225281191051,2.58246646883153,2.25261955442667,2.80877431586392,1.02730780935303,0.638177271962691,0.684802919724823,1.66098764596095,0.666219523631325,2.22722794128809,1.39912375625629,2.5236973228659,1.91960207048034,0.42438965179803,2.12608225377674,2.28369187762036,1.30599894569468,1.27993938234725,1.83527424853736,1.72269589234506,0.86152399231815,0.646413698057667,0.570070258369122,1.26015064879965,1.33038306393183,0.635030673459631,1.23012957516914,0,0,0.831173226792462,0.816677425049476,5.4409111995798,5.4693474116666,5.23523743973798,4.70585190424811,4.09827290975067,5.82612423637384,0.503587271902309,0.304130793658544,0.917733760808408,1.56478268869608,1.30815093828268,0.878744730937887,0.58328969722285,1.1198913730029,0,2.85230430298152,1.45072428402269,1.68046899571232,0.771778308107841,1.14613375975503,0.515672092277442,0.404632921719196,0.528990979272033,0,0.338844532069132,2.66788438833342,3.1496490104849,1.97773272513395,1.4209602298922,2.09720077362883,5.37905627450176,0.518448061542388,0.810035629990144,1.05162480675691,0,0.220868540951614,0.244981598429908,0.479227355091182,0.919218786610021,1.10115880999389,0.638436690425939,0.307213066512487,0.263772575460388,0.0914876436024097,1.56274011167028,0.279182999001381,0.56276261003168,0.45839474333043,0.294628585473668,0.569486723196412,0.186399445825301,0.605809546665472,0.982430281388212,3.47837386442013,0,0,0.539703191637817,0,0.448026887097336,0.561777680527007,0.681721290312231,0.779358013808606,0,0.563373679106722,0,0,0,0.865964164044856,1.77351905832569,3.53867111510348,1.25602267690966,2.84831672011889,1.33597925158342,1.04091196059682,1.21786191324856,1.38369298353635,1.3565037649736,1.52865319276416,2.01066546127481,0.247194967734374,0.289198713839823,1.76922110389975,1.29413479957927,2.87093973998512,1.93950101254089,0,0,1.46612694769419,1.02182822083437,4.91242010474273,2.99951365496704,3.04968544975355,0.449371918214468,0,0.376963056338593,0,0,0.41557608911912,0.324482526135515,0.305518091550949,1.49288364732112,1.0108910337347,0.631325567659422,1.17108398666433,0.229902104433473,0.180062129805349,0.150704817835715,0.95251098811859,1.0249097622788,1.21812241927647,0.517406741478031,1.5089759505299,1.13463648100692,1.23165786914764,1.09597866213787,0.556094498451196,1.39300866608867,1.02891068203972,0.796137067273973,2.1066395619397,1.80143534980301,2.27330799516474,1.03562886267751,0.938104239924385,1.08037236876609,0.946978942340841,0.393528463494808,0.925602677324269,0.232533944750408,0.536546802799238,0.700592054203017,0.493679549740441,0.492502392237286,0.648550476366846,0.292399974850665,0.439100230582101,1.34206418760372,0.630869845692382,0.102904612379284,1.32167513193519,1.05780226665418,1.2797295032114,0.928946687441754,0.77320476793256,0.403367049246685,0.444756087689741,0.951128130562796,0.949058123089023,1.64698954724011,1.75934646160189,0.795825888164603,1.55971269695296,0.898819408654221,1.29682829924817,1.7922714592893,1.13800740571849,0.571242563048644,2.25415471346161,0.814605311381257,1.74557238450863,2.10407459670956,1.26473074248515,1.32849133181642,0.941992367048249,1.97435462274881,0.592905254174298,1.16791574001266,1.57247196090562,0.674586337154561,1.62288097110802,0.964708639009667,0.763877555344259,0.287696137450811,0.972811360650212,1.09824565275233,1.43768206527355,0.744281895337007,0.936113019343682,0.757736633841335,0,1.92977408545347,0.923765950833023,0.568474235311454,1.30371981153621,0.678980343100753,0.704070744865506,1.17254380209271,1.6663054862021,2.34160377429359,1.26108115284953,0.664394068946325,2.23236676120482,1.3109065177259,0.863424909329478,1.01254341007058,1.50791283939272,4.89515115436839,0.491764273019036,0.275936746304732,0.321101179975584,0.117211686592203,0.655739781506702,0.757412781613119,2.2085575359138,0.780877488593277,0.861693590931196,2.86762557543062,1.11399337041197,3.67999490025482,3.23848561339915,2.04579100537918,2.37172666767914,0.963963949265421,1.13552068166615,1.06839362200353,0.977321756121456,1.48473110675282,0,2.18502572539483,1.81394134178851,0.943025398779491,0.885905678642318,1.53717573971964,1.80899805217755,0,0.712994756769443,0,1.05418608574999,1.03135543248187,1.02131881726136,1.26042765821917,0.905510786479282,0.857348140126369,1.41872186913819,1.78368817602071,0.658196082408484,1.8267896946876,1.64270195644597,0.847328283455281,0.661585194164886,0.98931751764888,1.61464426695906,2.0506394475573,2.74556391207214,2.29797259643086,1.1659233465194,0.556275906031529,1.36696704638282,0.619160603889667,1.29636169158798,2.63715839806567,0.820165366326151,1.37266903923914,4.07948231985253,3.07893195112048,3.59319931891502,0,0.790839983952838,1.21991680276109,0.324016022465404,0.836353184057875,0.655087691238533,1.21377911746339,0.826534557253359,2.09404753587224,0.777689839750757,0,2.25477175473676,1.79419855252775,2.15096037594227,1.555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| |||
|short_description=p12@Gatad2a | |||
}} | |||
Revision as of 15:55, 14 September 2013
| Short description: | p12@Gatad2a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_12_at_Gatad2a_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 142bp_to_ENSMUST00000065169, NM_001113345, NM_145596, uc009lyg.2, uc009lyh.2, uc009lyi.2_5end |
| EntrezGene: | Gatad2a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic cell | 9.68e-07 | 32 |
| hematopoietic oligopotent progenitor cell | 9.68e-07 | 32 |
| hematopoietic stem cell | 9.68e-07 | 32 |
| hematopoietic multipotent progenitor cell | 9.68e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
