FFCP PHASE1:Mm9::chr5:130698172..130698186,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=71667|HGNC=|UniProt=Q3TBN1|association_with_transcript=-18bp_to_NM_027854,uc008zui.2_5end|description=CAGE_peak_2_at_0610007L01Rik_5end|id=chr5:130698172..130698186,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!1.42e-07!24;UBERON:0000991!4.08e-07!18;UBERON:0005564!4.08e-07!18;UBERON:0005156!8.00e-07!26;UBERON:0000990!8.00e-07!26;UBERON:0004176!8.91e-07!17;UBERON:0009196!8.91e-07!17;UBERON:0009117!8.91e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0003133,1.38e-07,24;UBERON:0000991,3.98e-07,18;UBERON:0005564,3.98e-07,18;UBERON:0005156,7.81e-07,26;UBERON:0000990,7.81e-07,26;UBERON:0004176,8.70e-07,17;UBERON:0009196,8.70e-07,17;UBERON:0009117,8.70e-07,17|phase1_expression=5.12476310735341,0.697950815278722,0.909998478779072,0.60492842261366,0.500895729946347,1.00727563147134,2.10251376535973,0.903863264091034,0.422366166455,1.40438715793196,1.02730780935303,1.43589886191606,0.513602189793617,0.437102012094987,0.666219523631325,1.61980213911861,0.699561878128147,0.630924330716475,0.548457734422955,0.42438965179803,2.97651515528744,1.78723712161594,1.56719873483361,0.639969691173627,0.91763712426868,2.29692785646008,2.15380998079537,0.215471232685889,0.950117097281869,0.504060259519861,0.221730510655305,2.54012269383853,1.23012957516914,0,1.73310971850765,0.498703936075477,1.02084678131185,1.25559489221072,1.5626706890476,2.61761871986899,0,0.683045484958446,1.45653105909346,3.27331726736501,3.24406179902447,3.67093504323363,3.9119567217402,3.48840250208714,2.19686182734472,2.3331587888914,3.21968769738334,4.31257693094915,0.671130424230945,0,1.00828139742739,2.31533492432352,1.71920063963254,3.09403255366465,3.03474691289397,3.70293685490423,2.53532561402472,3.04960078862219,2.66788438833342,1.3498495759221,1.97773272513395,1.4209602298922,2.99600110518405,1.15265491596466,1.8664130215526,1.75507719831198,1.68259969081106,3.71346279724945,2.42955395046775,1.22490799214954,1.72521847832825,0,4.40463523997555,2.93680877595932,3.84016333140609,1.84640802822271,2.10421580285542,1.56274011167028,3.07101298901519,2.25105044012672,2.13917546887534,2.35702868378934,1.70846016958924,2.79599168737951,2.42323818666189,1.96486056277642,1.15945795480671,1.72084775396277,0.679971333707751,3.2382191498269,1.29955283489534,1.79210754838934,2.38755514223978,1.87473354835864,1.03914401841148,1.7666978725517,3.66192891419369,1.28326477414318,2.54805239706646,14.2213340630666,1.73192832808971,0.253359865475099,1.51657333504435,3.19714863213368,1.03575153458869,2.9688427812965,3.81667718885499,2.13125834818499,1.61430848079241,2.11011696773672,5.17390311397101,0.879666139307728,5.19109432242185,1.87979163995885,0,3.88240439873782,1.98757366614354,0,0,1.46390398505774,2.09446706813455,1.02182822083437,3.59445373517761,4.79922184794726,4.3203877204842,3.14560342750128,1.37250180845588,2.51308704225729,3.82413504423008,3.06858548796397,3.74018480207208,0.648965052271031,6.82323737797119,2.61254638281195,4.80173241023982,1.05220927943237,3.12289063110489,3.21862946206862,3.24111833649629,2.10986744970001,3.81004395247436,2.69038812598185,3.84177070694888,1.29351685369508,3.23351989399263,2.83659120251729,3.51902248327898,3.5071317188412,4.17070873838397,2.78601733217733,1.85203922767149,3.58261680273288,1.40442637462647,6.17634977075316,2.84163499395593,1.86413195281952,3.28336483973535,1.2604344302271,3.07768156260773,1.77087808572663,2.31400669331067,3.72054311600653,1.87791380979733,3.97002164048376,4.11399624783701,2.29834449710733,2.10778904819225,1.31579988682799,2.41505126820156,1.74468344388483,2.52347938276953,2.98423375899925,0,1.05780226665418,2.13288250535234,3.0190767341857,2.70621668776396,1.21010114774006,1.77902435075896,1.52180500890047,0.949058123089023,3.29397909448022,2.5133520880027,4.77495532898762,2.33956904542944,2.69645822596266,0.648414149624083,0.995706366271836,3.98302592001472,2.51346727741403,0,1.62921062276251,2.71533482034676,2.59502533594179,2.78240763346732,2.50937251565324,1.72698600625512,1.97435462274881,1.77871576252289,1.66845105716094,1.17935397067922,2.24862112384854,2.23146133527353,1.92941727801933,1.2731292589071,2.30156909960649,3.89124544260085,3.84385978463314,2.87536413054709,4.09355042435354,2.18426371180192,3.03094653536534,3.94674309748207,1.4473305640901,1.10851914099963,3.03186258832776,3.91115943460862,2.71592137240301,2.11221223459652,2.1775813467436,2.14239276797412,2.14647012643579,2.99506773801763,5.09368786192182,3.18909537314974,1.47476983244164,1.89953480052485,1.73578870297814,1.50791283939272,2.17562273527484,0.983528546038072,2.48343071674259,2.56880943980467,2.81308047821288,3.60656879828686,2.01976741763498,1.89304931649754,1.56175497718655,2.15423397732799,2.15071918157297,1.78238939265915,1.41538265394416,0.809621403349789,2.04579100537918,2.76701444562566,2.24924921495265,2.83880170416537,3.20518086601059,7.81857404897165,2.3095817216155,2.65490276679926,2.42780636154981,0.302323556964751,2.45186603682668,2.95301892880773,1.53717573971964,2.06742634534577,0.727067458955011,4.27796854061666,1.8962205476149,3.16255825724996,2.06271086496374,7.14923172082955,3.96134406868882,3.62204314591713,3.64372959553707,3.90148514013002,3.0322698992352,3.62007845324666,4.87143918583359,3.52007562095566,6.14313005505079,1.32317038832977,1.81374878235628,2.9063596805263,2.41251699712623,2.74556391207214,1.64140899745061,1.1659233465194,4.26478194624172,1.19609616558497,1.857481811669,2.96311243791539,1.88368457004691,1.77702496037333,0.457556346413045,6.28920190977265,5.318155188299,4.83699908315483,0,2.21435195506795,2.84647253977588,2.16010681643603,1.04544148007234,1.31017538247707,2.29269388854195,2.47960367176008,1.57053565190418,0.388844919875379,3.10669656543463,3.38215763210514,3.73791365109947,3.14371131868485,4.66682852025714,4.52059382172059,4.39285926276023,5.63314745499619,2.3436789271911,3.98465508817701,1.93267296660805,3.45636007509439,1.26404448251271,2.02725215290164,2.15693010046137,2.33857481360031,2.14832034800978,1.39076948346885,1.68273629327956,1.18151621739662,1.51449674922221,1.905170166375,1.10908803650525,1.07203668813728,0.769694733122636,1.5193997283604,1.36038230169127,3.10780334723691,2.51198798506532,2.51826924546118,1.73870634628971,3.37828455812128,1.83151624267265,1.07184189539533,4.51414893631827,1.6942555278512,2.76195141904306,1.71868654031819,2.06223818812425,3.42541259885321,3.0215755895588,1.35004500046361,1.80128481289688,3.17199686288943,2.07104124700728,1.55681021376265,5.58634822761443,2.90247129782028,2.91728060481953,2.09613162627982,1.2869045591501,2.22246727801615,1.44224540067226,1.92551525755089,3.28506375292937,0.760437899670719,1.88626341386076,1.21733959710847,1.60062881012173,1.7230640686684,0.952587382566147,2.20180219295225,1.15745532278223,0.824171801606613,1.61918812147837,1.71434626192708,1.59728225543404,2.38436189947321,1.74415699958794,2.91739079287525,1.94613598150856,2.19513567447327,1.31534855718921,1.62964936615034,1.12228454331548,1.89816028998679,1.67457620038458,4.50154147486658,2.16911577660352,1.92906610981141,2.99772693525535,3.04111090979031,5.37177635120746,3.25190164517034,4.19123696327079,3.47801753430632|short_description=p2@0610007L01Rik}} | ||
|EntrezGene=71667 | |||
|HGNC= | |||
|UniProt=Q3TBN1 | |||
|association_with_transcript=-18bp_to_NM_027854,uc008zui.2_5end | |||
|description=CAGE_peak_2_at_0610007L01Rik_5end | |||
|id=chr5:130698172..130698186,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!1.42e-07!24;UBERON:0000991!4.08e-07!18;UBERON:0005564!4.08e-07!18;UBERON:0005156!8.00e-07!26;UBERON:0000990!8.00e-07!26;UBERON:0004176!8.91e-07!17;UBERON:0009196!8.91e-07!17;UBERON:0009117!8.91e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,1.38e-07,24;UBERON:0000991,3.98e-07,18;UBERON:0005564,3.98e-07,18;UBERON:0005156,7.81e-07,26;UBERON:0000990,7.81e-07,26;UBERON:0004176,8.70e-07,17;UBERON:0009196,8.70e-07,17;UBERON:0009117,8.70e-07,17 | |||
|phase1_expression=5.12476310735341,0.697950815278722,0.909998478779072,0.60492842261366,0.500895729946347,1.00727563147134,2.10251376535973,0.903863264091034,0.422366166455,1.40438715793196,1.02730780935303,1.43589886191606,0.513602189793617,0.437102012094987,0.666219523631325,1.61980213911861,0.699561878128147,0.630924330716475,0.548457734422955,0.42438965179803,2.97651515528744,1.78723712161594,1.56719873483361,0.639969691173627,0.91763712426868,2.29692785646008,2.15380998079537,0.215471232685889,0.950117097281869,0.504060259519861,0.221730510655305,2.54012269383853,1.23012957516914,0,1.73310971850765,0.498703936075477,1.02084678131185,1.25559489221072,1.5626706890476,2.61761871986899,0,0.683045484958446,1.45653105909346,3.27331726736501,3.24406179902447,3.67093504323363,3.9119567217402,3.48840250208714,2.19686182734472,2.3331587888914,3.21968769738334,4.31257693094915,0.671130424230945,0,1.00828139742739,2.31533492432352,1.71920063963254,3.09403255366465,3.03474691289397,3.70293685490423,2.53532561402472,3.04960078862219,2.66788438833342,1.3498495759221,1.97773272513395,1.4209602298922,2.99600110518405,1.15265491596466,1.8664130215526,1.75507719831198,1.68259969081106,3.71346279724945,2.42955395046775,1.22490799214954,1.72521847832825,0,4.40463523997555,2.93680877595932,3.84016333140609,1.84640802822271,2.10421580285542,1.56274011167028,3.07101298901519,2.25105044012672,2.13917546887534,2.35702868378934,1.70846016958924,2.79599168737951,2.42323818666189,1.96486056277642,1.15945795480671,1.72084775396277,0.679971333707751,3.2382191498269,1.29955283489534,1.79210754838934,2.38755514223978,1.87473354835864,1.03914401841148,1.7666978725517,3.66192891419369,1.28326477414318,2.54805239706646,14.2213340630666,1.73192832808971,0.253359865475099,1.51657333504435,3.19714863213368,1.03575153458869,2.9688427812965,3.81667718885499,2.13125834818499,1.61430848079241,2.11011696773672,5.17390311397101,0.879666139307728,5.19109432242185,1.87979163995885,0,3.88240439873782,1.98757366614354,0,0,1.46390398505774,2.09446706813455,1.02182822083437,3.59445373517761,4.79922184794726,4.3203877204842,3.14560342750128,1.37250180845588,2.51308704225729,3.82413504423008,3.06858548796397,3.74018480207208,0.648965052271031,6.82323737797119,2.61254638281195,4.80173241023982,1.05220927943237,3.12289063110489,3.21862946206862,3.24111833649629,2.10986744970001,3.81004395247436,2.69038812598185,3.84177070694888,1.29351685369508,3.23351989399263,2.83659120251729,3.51902248327898,3.5071317188412,4.17070873838397,2.78601733217733,1.85203922767149,3.58261680273288,1.40442637462647,6.17634977075316,2.84163499395593,1.86413195281952,3.28336483973535,1.2604344302271,3.07768156260773,1.77087808572663,2.31400669331067,3.72054311600653,1.87791380979733,3.97002164048376,4.11399624783701,2.29834449710733,2.10778904819225,1.31579988682799,2.41505126820156,1.74468344388483,2.52347938276953,2.98423375899925,0,1.05780226665418,2.13288250535234,3.0190767341857,2.70621668776396,1.21010114774006,1.77902435075896,1.52180500890047,0.949058123089023,3.29397909448022,2.5133520880027,4.77495532898762,2.33956904542944,2.69645822596266,0.648414149624083,0.995706366271836,3.98302592001472,2.51346727741403,0,1.62921062276251,2.71533482034676,2.59502533594179,2.78240763346732,2.50937251565324,1.72698600625512,1.97435462274881,1.77871576252289,1.66845105716094,1.17935397067922,2.24862112384854,2.23146133527353,1.92941727801933,1.2731292589071,2.30156909960649,3.89124544260085,3.84385978463314,2.87536413054709,4.09355042435354,2.18426371180192,3.03094653536534,3.94674309748207,1.4473305640901,1.10851914099963,3.03186258832776,3.91115943460862,2.71592137240301,2.11221223459652,2.1775813467436,2.14239276797412,2.14647012643579,2.99506773801763,5.09368786192182,3.18909537314974,1.47476983244164,1.89953480052485,1.73578870297814,1.50791283939272,2.17562273527484,0.983528546038072,2.48343071674259,2.56880943980467,2.81308047821288,3.60656879828686,2.01976741763498,1.89304931649754,1.56175497718655,2.15423397732799,2.15071918157297,1.78238939265915,1.41538265394416,0.809621403349789,2.04579100537918,2.76701444562566,2.24924921495265,2.83880170416537,3.20518086601059,7.81857404897165,2.3095817216155,2.65490276679926,2.42780636154981,0.302323556964751,2.45186603682668,2.95301892880773,1.53717573971964,2.06742634534577,0.727067458955011,4.27796854061666,1.8962205476149,3.16255825724996,2.06271086496374,7.14923172082955,3.96134406868882,3.62204314591713,3.64372959553707,3.90148514013002,3.0322698992352,3.62007845324666,4.87143918583359,3.52007562095566,6.14313005505079,1.32317038832977,1.81374878235628,2.9063596805263,2.41251699712623,2.74556391207214,1.64140899745061,1.1659233465194,4.26478194624172,1.19609616558497,1.857481811669,2.96311243791539,1.88368457004691,1.77702496037333,0.457556346413045,6.28920190977265,5.318155188299,4.83699908315483,0,2.21435195506795,2.84647253977588,2.16010681643603,1.04544148007234,1.31017538247707,2.29269388854195,2.47960367176008,1.57053565190418,0.388844919875379,3.10669656543463,3.38215763210514,3.73791365109947,3.14371131868485,4.66682852025714,4.52059382172059,4.39285926276023,5.63314745499619,2.3436789271911,3.98465508817701,1.93267296660805,3.45636007509439,1.26404448251271,2.02725215290164,2.15693010046137,2.33857481360031,2.14832034800978,1.39076948346885,1.68273629327956,1.18151621739662,1.51449674922221,1.905170166375,1.10908803650525,1.07203668813728,0.769694733122636,1.5193997283604,1.36038230169127,3.10780334723691,2.51198798506532,2.51826924546118,1.73870634628971,3.37828455812128,1.83151624267265,1.07184189539533,4.51414893631827,1.6942555278512,2.76195141904306,1.71868654031819,2.06223818812425,3.42541259885321,3.0215755895588,1.35004500046361,1.80128481289688,3.17199686288943,2.07104124700728,1.55681021376265,5.58634822761443,2.90247129782028,2.91728060481953,2.09613162627982,1.2869045591501,2.22246727801615,1.44224540067226,1.92551525755089,3.28506375292937,0.760437899670719,1.88626341386076,1.21733959710847,1.60062881012173,1.7230640686684,0.952587382566147,2.20180219295225,1.15745532278223,0.824171801606613,1.61918812147837,1.71434626192708,1.59728225543404,2.38436189947321,1.74415699958794,2.91739079287525,1.94613598150856,2.19513567447327,1.31534855718921,1.62964936615034,1.12228454331548,1.89816028998679,1.67457620038458,4.50154147486658,2.16911577660352,1.92906610981141,2.99772693525535,3.04111090979031,5.37177635120746,3.25190164517034,4.19123696327079,3.47801753430632 | |||
|short_description=p2@0610007L01Rik | |||
}} |
Revision as of 06:33, 14 September 2013
Short description: | p2@0610007L01Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_0610007L01Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_NM_027854, uc008zui.2_5end |
EntrezGene: | 0610007L01Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive organ | 1.38e-07 | 24 |
gonad | 3.98e-07 | 18 |
gonad primordium | 3.98e-07 | 18 |
reproductive structure | 7.81e-07 | 26 |
reproductive system | 7.81e-07 | 26 |
external genitalia | 8.70e-07 | 17 |
indifferent external genitalia | 8.70e-07 | 17 |
indifferent gonad | 8.70e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.