FFCP PHASE1:Mm9::chr2:29643002..29643031,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=227683|HGNC=|MCL_coexpression_id=789|UniProt=D6RJJ8|association_with_transcript=0bp_to_ENSMUST00000143616_5end|description=CAGE_peak_5_at_Coq4_5end|id=chr2:29643002..29643031,+|ontology_enrichment_celltype=CL:0000239!9.86e-07!6;CL:0000677!9.86e-07!6;CL:0000212!9.86e-07!6;CL:0000584!9.86e-07!6|ontology_enrichment_celltype_v019_2=CL:0000682,6.97e-09,3;CL:0000239,1.11e-08,6;CL:0000677,1.11e-08,6;CL:0000584,1.11e-08,6;CL:0000075,1.96e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.00e-08!15;UBERON:0000160!4.17e-07!43;UBERON:0001242!4.98e-07!13;UBERON:0000060!4.98e-07!13;UBERON:0001262!4.98e-07!13;UBERON:0004786!4.98e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.23e-29,31;UBERON:0000344,4.03e-18,15;UBERON:0005409,1.34e-17,47;UBERON:0001242,1.43e-13,13;UBERON:0001262,1.43e-13,13;UBERON:0004786,1.43e-13,13;UBERON:0002108,7.19e-11,4;UBERON:0004923,1.35e-10,24;UBERON:0000331,1.57e-08,3;UBERON:0002116,1.57e-08,3;UBERON:0001204,1.57e-08,3;UBERON:0001168,1.57e-08,3;UBERON:0001962,8.07e-07,2;UBERON:0001961,8.07e-07,2;UBERON:0001744,8.07e-07,2|phase1_expression=0,8.02643437570531,5.0049916332849,10.5862473957391,6.51164448930251,0.33575854382378,0.700837921786577,0.258246646883153,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.340173160604279,0,0,4.31979541542198,2.06468352960453,2.29692785646008,2.58457197695445,1.29282739611533,1.52018735565099,1.76421090831952,1.55211357458713,0,0,0,0,0,0,1.67412652294763,0,2.09409497589519,20.5881020810855,5.46436387966757,4.85510353031154,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226714680320357,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0,2.04365644166873,0,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0,0,0.505445516867349,4.20883711772948,0.130120442962704,0,0.180062129805349,0,0,0,0,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4684772428983,4.49565963328025,0,0,0,0.403367049246685,1.33426826306922,1.90225626112559,1.42358718463353,1.31759163779209,1.50801125280162,0.994782360205754,1.36474860983384,0,2.37751854862164,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.642202359951168,0.35163505977661,0.327869890753351,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0.304464949114599,0,0,0,0.32977250588296,0.322928853391811,0.361877549568935,0.477489376012546,0.328281799490123,1.7488850197791,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,3.38215763210514,0,0,0,0,0,0,0.2604087696879,0.314578033277133,0.483168241652012,2.01621004380506,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0.280924522409647,0,0.229741875822453,0,0.231768651889711,0,0,0.441596760403192,0.342869252385415,0.177475806159338,0,0.290692833264657,0.188218760830661,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0.118635018124174,0.197008964751127,0,0,0.385813221962283,0,0,0.429742108096597,0,0,0|short_description=p5@Coq4}} | ||
|EntrezGene=227683 | |||
|HGNC= | |||
|MCL_coexpression_id=789 | |||
|UniProt=D6RJJ8 | |||
|association_with_transcript=0bp_to_ENSMUST00000143616_5end | |||
|description=CAGE_peak_5_at_Coq4_5end | |||
|id=chr2:29643002..29643031,+ | |||
|ontology_enrichment_celltype=CL:0000239!9.86e-07!6;CL:0000677!9.86e-07!6;CL:0000212!9.86e-07!6;CL:0000584!9.86e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,6.97e-09,3;CL:0000239,1.11e-08,6;CL:0000677,1.11e-08,6;CL:0000584,1.11e-08,6;CL:0000075,1.96e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.00e-08!15;UBERON:0000160!4.17e-07!43;UBERON:0001242!4.98e-07!13;UBERON:0000060!4.98e-07!13;UBERON:0001262!4.98e-07!13;UBERON:0004786!4.98e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.23e-29,31;UBERON:0000344,4.03e-18,15;UBERON:0005409,1.34e-17,47;UBERON:0001242,1.43e-13,13;UBERON:0001262,1.43e-13,13;UBERON:0004786,1.43e-13,13;UBERON:0002108,7.19e-11,4;UBERON:0004923,1.35e-10,24;UBERON:0000331,1.57e-08,3;UBERON:0002116,1.57e-08,3;UBERON:0001204,1.57e-08,3;UBERON:0001168,1.57e-08,3;UBERON:0001962,8.07e-07,2;UBERON:0001961,8.07e-07,2;UBERON:0001744,8.07e-07,2 | |||
|phase1_expression=0,8.02643437570531,5.0049916332849,10.5862473957391,6.51164448930251,0.33575854382378,0.700837921786577,0.258246646883153,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.340173160604279,0,0,4.31979541542198,2.06468352960453,2.29692785646008,2.58457197695445,1.29282739611533,1.52018735565099,1.76421090831952,1.55211357458713,0,0,0,0,0,0,1.67412652294763,0,2.09409497589519,20.5881020810855,5.46436387966757,4.85510353031154,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226714680320357,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0,2.04365644166873,0,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0,0,0.505445516867349,4.20883711772948,0.130120442962704,0,0.180062129805349,0,0,0,0,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4684772428983,4.49565963328025,0,0,0,0.403367049246685,1.33426826306922,1.90225626112559,1.42358718463353,1.31759163779209,1.50801125280162,0.994782360205754,1.36474860983384,0,2.37751854862164,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.642202359951168,0.35163505977661,0.327869890753351,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0.304464949114599,0,0,0,0.32977250588296,0.322928853391811,0.361877549568935,0.477489376012546,0.328281799490123,1.7488850197791,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,3.38215763210514,0,0,0,0,0,0,0.2604087696879,0.314578033277133,0.483168241652012,2.01621004380506,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0.280924522409647,0,0.229741875822453,0,0.231768651889711,0,0,0.441596760403192,0.342869252385415,0.177475806159338,0,0.290692833264657,0.188218760830661,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0.118635018124174,0.197008964751127,0,0,0.385813221962283,0,0,0.429742108096597,0,0,0 | |||
|short_description=p5@Coq4 | |||
}} |
Revision as of 23:39, 13 September 2013
Short description: | p5@Coq4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Coq4_5end |
Coexpression cluster: | MCL_coexpression_mm9:789 |
Association with transcript: | 0bp_to_ENSMUST00000143616_5end |
EntrezGene: | Coq4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 6.97e-09 | 3 |
brush border epithelial cell | 1.11e-08 | 6 |
gut absorptive cell | 1.11e-08 | 6 |
enterocyte | 1.11e-08 | 6 |
columnar/cuboidal epithelial cell | 1.96e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.23e-29 | 31 |
mucosa | 4.03e-18 | 15 |
gastrointestinal system | 1.34e-17 | 47 |
intestinal mucosa | 1.43e-13 | 13 |
wall of intestine | 1.43e-13 | 13 |
gastrointestinal system mucosa | 1.43e-13 | 13 |
small intestine | 7.19e-11 | 4 |
organ component layer | 1.35e-10 | 24 |
ileal mucosa | 1.57e-08 | 3 |
ileum | 1.57e-08 | 3 |
mucosa of small intestine | 1.57e-08 | 3 |
wall of small intestine | 1.57e-08 | 3 |
gut-associated lymphoid tissue | 8.07e-07 | 2 |
mucosa-associated lymphoid tissue | 8.07e-07 | 2 |
lymphoid tissue | 8.07e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.