FFCP PHASE1:Mm9::chr4:111645637..111645677,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=328505|HGNC=|MCL_coexpression_id=91|UniProt=E9Q3C9,A7XV04|association_with_transcript=105bp_to_ENSMUST00000055014,ENSMUST00000163281,NM_001142775,NM_177818,uc008udo.1,uc012dio.1_5end|description=CAGE_peak_3_at_Skint7_5end|id=chr4:111645637..111645677,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!4.09e-12!5;UBERON:0001003!4.09e-12!5;UBERON:0002097!4.09e-12!5;UBERON:0002199!4.09e-12!5;UBERON:0007029!4.09e-12!5;UBERON:0007376!4.09e-12!5;UBERON:0002416!4.09e-12!5;UBERON:0007383!4.09e-12!5|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.43e-49,5;UBERON:0001003,2.43e-49,5;UBERON:0002097,2.43e-49,5;UBERON:0002199,2.43e-49,5;UBERON:0007029,2.43e-49,5;UBERON:0007376,2.43e-49,5;UBERON:0002416,2.43e-49,5;UBERON:0007383,2.43e-49,5;UBERON:0003102,9.97e-22,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,1.39300866608867,3.70407845534298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9726015706213,3.71368181400583,3.1362720962641,2.38744688006273,6.56563598980245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0.389762468933385,0,0,0,0.147689527174577,0.302899349844443,0.381034033274999,0.302478555410522,0.194915761479505,0.962118416403295,0.467507608726276,0,0,0,0,0.772758376128762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.37456602987953,0.192075457214608,0.114870937911227,0,0,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0.581385666529314,0.0941093804153306,0.423073039458382,0.548783918618318,0.526139422875686,0.135804113845862,0,0.118635018124174,0.394017929502254,0,0.464810523557898,0.964533054905707,0,1.40358965067245,1.28922632428979,0.382576664137687,0.220591419119515,0|short_description=p3@Skint7}} | ||
|EntrezGene=328505 | |||
|HGNC= | |||
|MCL_coexpression_id=91 | |||
|UniProt=E9Q3C9,A7XV04 | |||
|association_with_transcript=105bp_to_ENSMUST00000055014,ENSMUST00000163281,NM_001142775,NM_177818,uc008udo.1,uc012dio.1_5end | |||
|description=CAGE_peak_3_at_Skint7_5end | |||
|id=chr4:111645637..111645677,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!4.09e-12!5;UBERON:0001003!4.09e-12!5;UBERON:0002097!4.09e-12!5;UBERON:0002199!4.09e-12!5;UBERON:0007029!4.09e-12!5;UBERON:0007376!4.09e-12!5;UBERON:0002416!4.09e-12!5;UBERON:0007383!4.09e-12!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.43e-49,5;UBERON:0001003,2.43e-49,5;UBERON:0002097,2.43e-49,5;UBERON:0002199,2.43e-49,5;UBERON:0007029,2.43e-49,5;UBERON:0007376,2.43e-49,5;UBERON:0002416,2.43e-49,5;UBERON:0007383,2.43e-49,5;UBERON:0003102,9.97e-22,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0.278047249225598,1.39300866608867,3.70407845534298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9726015706213,3.71368181400583,3.1362720962641,2.38744688006273,6.56563598980245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0.389762468933385,0,0,0,0.147689527174577,0.302899349844443,0.381034033274999,0.302478555410522,0.194915761479505,0.962118416403295,0.467507608726276,0,0,0,0,0.772758376128762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.37456602987953,0.192075457214608,0.114870937911227,0,0,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0.581385666529314,0.0941093804153306,0.423073039458382,0.548783918618318,0.526139422875686,0.135804113845862,0,0.118635018124174,0.394017929502254,0,0.464810523557898,0.964533054905707,0,1.40358965067245,1.28922632428979,0.382576664137687,0.220591419119515,0 | |||
|short_description=p3@Skint7 | |||
}} |
Revision as of 03:27, 14 September 2013
Short description: | p3@Skint7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Skint7_5end |
Coexpression cluster: | MCL_coexpression_mm9:91 |
Association with transcript: | 105bp_to_ENSMUST00000055014, ENSMUST00000163281, NM_001142775, NM_177818, uc008udo.1, uc012dio.1_5end |
EntrezGene: | Skint7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 2.43e-49 | 5 |
skin epidermis | 2.43e-49 | 5 |
skin of body | 2.43e-49 | 5 |
integument | 2.43e-49 | 5 |
surface | 2.43e-49 | 5 |
outer epithelium | 2.43e-49 | 5 |
integumental system | 2.43e-49 | 5 |
enveloping layer of ectoderm | 2.43e-49 | 5 |
surface structure | 9.97e-22 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.