FFCP PHASE1:Mm9::chr1:95628476..95628506,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1881|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:95628476..95628506,-|id=chr1:95628476..95628506,-|ontology_enrichment_celltype=CL:0002563!3.87e-07!9;CL:0002251!3.87e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,5.87e-09,9;CL:0002251,5.87e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.14e-16!43;UBERON:0005409!4.47e-15!59;UBERON:0000344!9.68e-11!15;UBERON:0001242!1.61e-09!13;UBERON:0000060!1.61e-09!13;UBERON:0001262!1.61e-09!13;UBERON:0004786!1.61e-09!13;UBERON:0000485!2.44e-07!11;UBERON:0003350!3.87e-07!9;UBERON:0004808!3.87e-07!9;UBERON:0001277!3.87e-07!9;UBERON:0003103!3.99e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.17e-20,31;UBERON:0005409,7.85e-19,47;UBERON:0000344,1.01e-13,15;UBERON:0001242,4.19e-12,13;UBERON:0001262,4.19e-12,13;UBERON:0004786,4.19e-12,13;UBERON:0000485,3.20e-09,11;UBERON:0003350,5.87e-09,9;UBERON:0004808,5.87e-09,9;UBERON:0001277,5.87e-09,9;UBERON:0007100,6.20e-07,18;UBERON:0000948,6.20e-07,18;UBERON:0005498,6.20e-07,18;UBERON:0004140,6.20e-07,18;UBERON:0009881,6.20e-07,18;UBERON:0004141,6.20e-07,18;UBERON:0003084,6.20e-07,18;UBERON:0007005,6.20e-07,18;UBERON:0004139,6.20e-07,18;UBERON:0004291,6.20e-07,18;UBERON:0003103,8.13e-07,43|phase1_expression=1.44133962394315,9.42233600626275,15.9249733786338,7.25914107136392,9.01612313903425,12.5909453933917,8.87728034262997,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01755411891312,0,0,11.5194544411253,11.9292826154928,27.563134277521,25.4149577733854,16.8067561494993,18.2422482678119,18.146169342715,19.7340154483221,0,0,0,35.2398976096555,30.2547054552456,34.0962824958156,0,0,0,0,0,0,0,0,0,0,0.65407546914134,1.5378032791413,0.388859798148567,0.419959264876088,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.441737081903227,0,0,0,2.20231761998777,1.40456071893706,1.84327839907492,0.131886287730194,0.182975287204819,0.52091337055676,1.3959149950069,1.12552522006336,1.68078072554491,0.589257170947335,0.142371680799103,0.931997229126503,0,0,0.579728977403356,0,0,0,0,0,3.7919993435573,0,0,0,2.25349471642689,0,0,0,0.216491041011214,0,0,8.5637909789295,0,0,0,0.304465478312141,0.230615497256059,0,0,0.376999773989026,0,0,0,0.485300549842228,0.883366073841574,1.45462575940567,3.72783522436244,0.878342391034642,1.46612694769419,8.68553987709211,0,0,0,1.19832511523858,0.915001205637253,0.502617408451458,0.173824320192276,0.767146371990992,0.83115217823824,0.486723789203273,0.101839363850316,0.622034853050465,0,1.68353484709179,0.390361328888111,0.229902104433473,0.540186389416048,0.452114453507145,0.136072998302656,0.512454881139399,0.281105173679186,1.03481348295606,0,0,0.175951124163949,0.657587197282725,0,0,0,0,0,0,0,1.44988040774851,3.75241695969754,3.06105504483725,2.13070262026689,5.1158700254325,4.47374627373397,5.58081467400979,4.56064782379353,3.61972561338225,3.45575684818309,7.05920095540109,7.05298643048945,8.33339928324394,8.12335426576887,8.05238512562231,0.841159794256509,0.102904612379284,3.96502539580558,12.9580777665137,0,0.232236671860439,1.80414445850931,9.27744213267376,6.22658522765637,9.3210556795154,12.3377556001573,6.75265714368445,4.27269854960458,4.77495532898762,5.06906626509712,9.88701349519644,14.4812493416045,11.3510525754989,2.27601481143698,2.28497025219458,3.38123207019241,3.66572390121566,6.59438456369928,4.55882829287071,12.4575978134787,26.2746063403692,32.0277404796405,34.6746030620259,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0.482443521363367,0.923765950833023,0.189491411770485,0,0.339490171550376,0,0,0.476087281772027,0.585400943573396,0,0.44292937929755,0,0.327726629431476,0.172684981865896,0.433947175744535,0,0,2.45882136509518,3.31124095565679,0.321101179975584,2.46144541843627,0,5.80683132570058,0,0,0,0,0,0,0,0,0,1.28528526568723,0.283880170416537,0.534196811001766,0.162886959353576,0.494910368917606,0,0.728341908464944,3.32555912661226,4.71512699389745,0.590603785761546,0.922305443831782,0.775284879504663,0,2.13898427030833,3.47640433729398,5.27093042874994,4.12542172992747,0.340439605753788,2.52085531643834,2.8458910432206,4.07240366560025,3.01478397191865,1.78368817602071,3.1264313914403,0.913394847343798,0,0,0,0.16488625294148,0,0.241251699712623,0.119372344003136,0.164140899745061,6.70405924248657,0.927126510052548,0,0,0.185194527369712,0,0,0,0.169978429993855,0.139951452323658,0,10.5013767981662,0.158167996790568,0.203319467126849,2.59212817972323,2.50905955217362,5.45906409365444,3.50647300600534,3.63675205191478,15.4436005770577,23.4603101658145,1.86401793926078,0,0,0.165458490457098,0,0.258319646955462,0.337912250981556,0,0.13020438484395,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,4.0811469050738,0,0,0,0.386379188064381,0.563047426353546,1.09890974560359,0,0.501572104035363,0,0,0,0,0,0.755393897389701,0,0.900642406448441,0,0,0,0,0,0,0.209613162627982,0.735374033800057,1.11123363900808,1.85431551515005,0.962757628775446,1.01078884705519,1.01391719956096,0.188626341386076,1.87283014939765,1.85672941974121,2.23998328926892,0.952587382566147,0.927074607558844,1.92909220463705,1.23625770240992,0.294397840268795,1.71434626192708,2.48466128623072,0.953744759789284,1.16277133305863,1.59985946706062,1.09998990259179,1.46342378298218,2.10455769150274,2.03706170768793,0,1.18635018124174,1.37906275325789,0.818462086339379,2.01417893541756,1.73615949883027,0.499621155875892,0.467863216890817,1.50409737833809,0.765153328275374,1.10295709559758,0.463735671240843|short_description=p@chr1:95628476..95628506,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1881 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:95628476..95628506,- | |||
|id=chr1:95628476..95628506,- | |||
|ontology_enrichment_celltype=CL:0002563!3.87e-07!9;CL:0002251!3.87e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.87e-09,9;CL:0002251,5.87e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.14e-16!43;UBERON:0005409!4.47e-15!59;UBERON:0000344!9.68e-11!15;UBERON:0001242!1.61e-09!13;UBERON:0000060!1.61e-09!13;UBERON:0001262!1.61e-09!13;UBERON:0004786!1.61e-09!13;UBERON:0000485!2.44e-07!11;UBERON:0003350!3.87e-07!9;UBERON:0004808!3.87e-07!9;UBERON:0001277!3.87e-07!9;UBERON:0003103!3.99e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.17e-20,31;UBERON:0005409,7.85e-19,47;UBERON:0000344,1.01e-13,15;UBERON:0001242,4.19e-12,13;UBERON:0001262,4.19e-12,13;UBERON:0004786,4.19e-12,13;UBERON:0000485,3.20e-09,11;UBERON:0003350,5.87e-09,9;UBERON:0004808,5.87e-09,9;UBERON:0001277,5.87e-09,9;UBERON:0007100,6.20e-07,18;UBERON:0000948,6.20e-07,18;UBERON:0005498,6.20e-07,18;UBERON:0004140,6.20e-07,18;UBERON:0009881,6.20e-07,18;UBERON:0004141,6.20e-07,18;UBERON:0003084,6.20e-07,18;UBERON:0007005,6.20e-07,18;UBERON:0004139,6.20e-07,18;UBERON:0004291,6.20e-07,18;UBERON:0003103,8.13e-07,43 | |||
|phase1_expression=1.44133962394315,9.42233600626275,15.9249733786338,7.25914107136392,9.01612313903425,12.5909453933917,8.87728034262997,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01755411891312,0,0,11.5194544411253,11.9292826154928,27.563134277521,25.4149577733854,16.8067561494993,18.2422482678119,18.146169342715,19.7340154483221,0,0,0,35.2398976096555,30.2547054552456,34.0962824958156,0,0,0,0,0,0,0,0,0,0,0.65407546914134,1.5378032791413,0.388859798148567,0.419959264876088,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.441737081903227,0,0,0,2.20231761998777,1.40456071893706,1.84327839907492,0.131886287730194,0.182975287204819,0.52091337055676,1.3959149950069,1.12552522006336,1.68078072554491,0.589257170947335,0.142371680799103,0.931997229126503,0,0,0.579728977403356,0,0,0,0,0,3.7919993435573,0,0,0,2.25349471642689,0,0,0,0.216491041011214,0,0,8.5637909789295,0,0,0,0.304465478312141,0.230615497256059,0,0,0.376999773989026,0,0,0,0.485300549842228,0.883366073841574,1.45462575940567,3.72783522436244,0.878342391034642,1.46612694769419,8.68553987709211,0,0,0,1.19832511523858,0.915001205637253,0.502617408451458,0.173824320192276,0.767146371990992,0.83115217823824,0.486723789203273,0.101839363850316,0.622034853050465,0,1.68353484709179,0.390361328888111,0.229902104433473,0.540186389416048,0.452114453507145,0.136072998302656,0.512454881139399,0.281105173679186,1.03481348295606,0,0,0.175951124163949,0.657587197282725,0,0,0,0,0,0,0,1.44988040774851,3.75241695969754,3.06105504483725,2.13070262026689,5.1158700254325,4.47374627373397,5.58081467400979,4.56064782379353,3.61972561338225,3.45575684818309,7.05920095540109,7.05298643048945,8.33339928324394,8.12335426576887,8.05238512562231,0.841159794256509,0.102904612379284,3.96502539580558,12.9580777665137,0,0.232236671860439,1.80414445850931,9.27744213267376,6.22658522765637,9.3210556795154,12.3377556001573,6.75265714368445,4.27269854960458,4.77495532898762,5.06906626509712,9.88701349519644,14.4812493416045,11.3510525754989,2.27601481143698,2.28497025219458,3.38123207019241,3.66572390121566,6.59438456369928,4.55882829287071,12.4575978134787,26.2746063403692,32.0277404796405,34.6746030620259,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0.482443521363367,0.923765950833023,0.189491411770485,0,0.339490171550376,0,0,0.476087281772027,0.585400943573396,0,0.44292937929755,0,0.327726629431476,0.172684981865896,0.433947175744535,0,0,2.45882136509518,3.31124095565679,0.321101179975584,2.46144541843627,0,5.80683132570058,0,0,0,0,0,0,0,0,0,1.28528526568723,0.283880170416537,0.534196811001766,0.162886959353576,0.494910368917606,0,0.728341908464944,3.32555912661226,4.71512699389745,0.590603785761546,0.922305443831782,0.775284879504663,0,2.13898427030833,3.47640433729398,5.27093042874994,4.12542172992747,0.340439605753788,2.52085531643834,2.8458910432206,4.07240366560025,3.01478397191865,1.78368817602071,3.1264313914403,0.913394847343798,0,0,0,0.16488625294148,0,0.241251699712623,0.119372344003136,0.164140899745061,6.70405924248657,0.927126510052548,0,0,0.185194527369712,0,0,0,0.169978429993855,0.139951452323658,0,10.5013767981662,0.158167996790568,0.203319467126849,2.59212817972323,2.50905955217362,5.45906409365444,3.50647300600534,3.63675205191478,15.4436005770577,23.4603101658145,1.86401793926078,0,0,0.165458490457098,0,0.258319646955462,0.337912250981556,0,0.13020438484395,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,4.0811469050738,0,0,0,0.386379188064381,0.563047426353546,1.09890974560359,0,0.501572104035363,0,0,0,0,0,0.755393897389701,0,0.900642406448441,0,0,0,0,0,0,0.209613162627982,0.735374033800057,1.11123363900808,1.85431551515005,0.962757628775446,1.01078884705519,1.01391719956096,0.188626341386076,1.87283014939765,1.85672941974121,2.23998328926892,0.952587382566147,0.927074607558844,1.92909220463705,1.23625770240992,0.294397840268795,1.71434626192708,2.48466128623072,0.953744759789284,1.16277133305863,1.59985946706062,1.09998990259179,1.46342378298218,2.10455769150274,2.03706170768793,0,1.18635018124174,1.37906275325789,0.818462086339379,2.01417893541756,1.73615949883027,0.499621155875892,0.467863216890817,1.50409737833809,0.765153328275374,1.10295709559758,0.463735671240843 | |||
|short_description=p@chr1:95628476..95628506,- | |||
}} |
Revision as of 21:21, 13 September 2013
Short description: | p@chr1:95628476..95628506, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:95628476..95628506, - |
Coexpression cluster: | MCL_coexpression_mm9:1881 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.87e-09 | 9 |
epithelial cell of alimentary canal | 5.87e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.17e-20 | 31 |
gastrointestinal system | 7.85e-19 | 47 |
mucosa | 1.01e-13 | 15 |
intestinal mucosa | 4.19e-12 | 13 |
wall of intestine | 4.19e-12 | 13 |
gastrointestinal system mucosa | 4.19e-12 | 13 |
simple columnar epithelium | 3.20e-09 | 11 |
epithelium of mucosa | 5.87e-09 | 9 |
gastrointestinal system epithelium | 5.87e-09 | 9 |
intestinal epithelium | 5.87e-09 | 9 |
primary circulatory organ | 6.20e-07 | 18 |
heart | 6.20e-07 | 18 |
primitive heart tube | 6.20e-07 | 18 |
primary heart field | 6.20e-07 | 18 |
anterior lateral plate mesoderm | 6.20e-07 | 18 |
heart tube | 6.20e-07 | 18 |
heart primordium | 6.20e-07 | 18 |
cardiac mesoderm | 6.20e-07 | 18 |
cardiogenic plate | 6.20e-07 | 18 |
heart rudiment | 6.20e-07 | 18 |
compound organ | 8.13e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.