FFCP PHASE1:Mm9::chr1:71787899..71787904,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=31|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:71787899..71787904,-|id=chr1:71787899..71787904,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.33e-65!3;UBERON:0000478!1.33e-65!3;UBERON:0000158!1.33e-65!3;UBERON:0005795!2.33e-49!4;UBERON:0000995!2.33e-49!4;UBERON:0001987!1.66e-44!2;UBERON:0003124!1.66e-44!2;UBERON:0004340!1.66e-44!2;UBERON:0003975!9.85e-40!5;UBERON:0003134!2.89e-25!8;UBERON:0000305!8.39e-23!1;UBERON:0006834!1.39e-22!1;UBERON:0004175!1.40e-22!9;UBERON:0000474!1.40e-22!9;UBERON:0003100!1.15e-18!11;UBERON:0004923!4.35e-09!24;UBERON:0003133!4.63e-09!24;UBERON:0004871!1.59e-08!3;UBERON:0005156!1.99e-08!26;UBERON:0000990!1.99e-08!26;UBERON:0007023!1.20e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.58e-86,3;UBERON:0000478,1.58e-86,3;UBERON:0000158,1.58e-86,3;UBERON:0001987,1.68e-58,2;UBERON:0003124,1.68e-58,2;UBERON:0004340,1.68e-58,2;UBERON:0005795,5.63e-30,4;UBERON:0000995,5.63e-30,4;UBERON:0000305,1.10e-29,1;UBERON:0003975,2.98e-24,5;UBERON:0003134,1.23e-15,8;UBERON:0004175,4.91e-14,9;UBERON:0000474,4.91e-14,9;UBERON:0004923,6.63e-12,24;UBERON:0003100,1.07e-11,11;UBERON:0004871,7.15e-11,3;UBERON:0006554,1.41e-07,18;UBERON:0001008,3.11e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87737366450968,27.114505070569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:71787899..71787904,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=31 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:71787899..71787904,- | |||
|id=chr1:71787899..71787904,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.33e-65!3;UBERON:0000478!1.33e-65!3;UBERON:0000158!1.33e-65!3;UBERON:0005795!2.33e-49!4;UBERON:0000995!2.33e-49!4;UBERON:0001987!1.66e-44!2;UBERON:0003124!1.66e-44!2;UBERON:0004340!1.66e-44!2;UBERON:0003975!9.85e-40!5;UBERON:0003134!2.89e-25!8;UBERON:0000305!8.39e-23!1;UBERON:0006834!1.39e-22!1;UBERON:0004175!1.40e-22!9;UBERON:0000474!1.40e-22!9;UBERON:0003100!1.15e-18!11;UBERON:0004923!4.35e-09!24;UBERON:0003133!4.63e-09!24;UBERON:0004871!1.59e-08!3;UBERON:0005156!1.99e-08!26;UBERON:0000990!1.99e-08!26;UBERON:0007023!1.20e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.58e-86,3;UBERON:0000478,1.58e-86,3;UBERON:0000158,1.58e-86,3;UBERON:0001987,1.68e-58,2;UBERON:0003124,1.68e-58,2;UBERON:0004340,1.68e-58,2;UBERON:0005795,5.63e-30,4;UBERON:0000995,5.63e-30,4;UBERON:0000305,1.10e-29,1;UBERON:0003975,2.98e-24,5;UBERON:0003134,1.23e-15,8;UBERON:0004175,4.91e-14,9;UBERON:0000474,4.91e-14,9;UBERON:0004923,6.63e-12,24;UBERON:0003100,1.07e-11,11;UBERON:0004871,7.15e-11,3;UBERON:0006554,1.41e-07,18;UBERON:0001008,3.11e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87737366450968,27.114505070569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:71787899..71787904,- | |||
}} |
Revision as of 20:50, 13 September 2013
Short description: | p@chr1:71787899..71787904, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:71787899..71787904, - |
Coexpression cluster: | MCL_coexpression_mm9:31 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.58e-86 | 3 |
extraembryonic structure | 1.58e-86 | 3 |
membranous layer | 1.58e-86 | 3 |
placenta | 1.68e-58 | 2 |
chorion | 1.68e-58 | 2 |
allantois | 1.68e-58 | 2 |
embryonic uterus | 5.63e-30 | 4 |
uterus | 5.63e-30 | 4 |
amnion | 1.10e-29 | 1 |
internal female genitalia | 2.98e-24 | 5 |
female reproductive organ | 1.23e-15 | 8 |
internal genitalia | 4.91e-14 | 9 |
female reproductive system | 4.91e-14 | 9 |
organ component layer | 6.63e-12 | 24 |
female organism | 1.07e-11 | 11 |
somatic layer of lateral plate mesoderm | 7.15e-11 | 3 |
urinary system structure | 1.41e-07 | 18 |
renal system | 3.11e-07 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.