FFCP PHASE1:Mm9::chr15:75693709..75693724,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=191|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:75693709..75693724,+|id=chr15:75693709..75693724,+|ontology_enrichment_celltype=CL:0000239!1.40e-10!6;CL:0000677!1.40e-10!6;CL:0000212!1.40e-10!6;CL:0000584!1.40e-10!6;CL:0000075!6.30e-09!7;CL:0000473!9.88e-07!3;CL:0000627!9.88e-07!3;CL:0000682!9.88e-07!3;CL:0002563!9.94e-07!9;CL:0002251!9.94e-07!9|ontology_enrichment_celltype_v019_2=CL:0000682,2.34e-10,3;CL:0000239,1.77e-08,6;CL:0000677,1.77e-08,6;CL:0000584,1.77e-08,6;CL:0000075,2.89e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.59e-22!59;UBERON:0000160!5.87e-22!43;UBERON:0000344!1.43e-15!15;UBERON:0001242!2.72e-12!13;UBERON:0000060!2.72e-12!13;UBERON:0001262!2.72e-12!13;UBERON:0004786!2.72e-12!13;UBERON:0004923!5.83e-10!24;UBERON:0001007!3.13e-07!128;UBERON:0001555!3.13e-07!128;UBERON:0007026!3.13e-07!128;UBERON:0004119!5.45e-07!130;UBERON:0000925!5.45e-07!130;UBERON:0006595!5.45e-07!130;UBERON:0003350!9.94e-07!9;UBERON:0004808!9.94e-07!9;UBERON:0001277!9.94e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.72e-41,31;UBERON:0005409,8.28e-26,47;UBERON:0000344,8.38e-19,15;UBERON:0001242,9.80e-14,13;UBERON:0001262,9.80e-14,13;UBERON:0004786,9.80e-14,13;UBERON:0002108,8.79e-12,4;UBERON:0004923,4.99e-11,24;UBERON:0001007,6.68e-10,116;UBERON:0001555,6.68e-10,116;UBERON:0007026,6.68e-10,116;UBERON:0004119,1.20e-09,118;UBERON:0000925,1.20e-09,118;UBERON:0006595,1.20e-09,118;UBERON:0000331,2.53e-09,3;UBERON:0002116,2.53e-09,3;UBERON:0001204,2.53e-09,3;UBERON:0001168,2.53e-09,3;UBERON:0004921,6.33e-08,114;UBERON:0001962,1.31e-07,2;UBERON:0001961,1.31e-07,2;UBERON:0001744,1.31e-07,2|phase1_expression=0,21.9854506812797,15.9249733786338,2.72217790176147,3.50627010962443,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3192271249275,19.9586074528438,17.2269589234506,10.3382879078178,7.32602191132023,2.28028103347649,3.2763916868791,5.09980174507201,0.635030673459631,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,10.3135720998782,0,0,0.257734922644187,2.21851877085677,2.00140239460383,3.23383564391351,3.32170343081158,3.45867804920423,6.28338022000674,5.76973768919337,5.8489226135736,3.59527763461689,1.29682829924817,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0.209088296014469,0.87345025498471,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.231768651889711,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,1.68342681497322,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr15:75693709..75693724,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=191 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:75693709..75693724,+ | |||
|id=chr15:75693709..75693724,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.40e-10!6;CL:0000677!1.40e-10!6;CL:0000212!1.40e-10!6;CL:0000584!1.40e-10!6;CL:0000075!6.30e-09!7;CL:0000473!9.88e-07!3;CL:0000627!9.88e-07!3;CL:0000682!9.88e-07!3;CL:0002563!9.94e-07!9;CL:0002251!9.94e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.34e-10,3;CL:0000239,1.77e-08,6;CL:0000677,1.77e-08,6;CL:0000584,1.77e-08,6;CL:0000075,2.89e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.59e-22!59;UBERON:0000160!5.87e-22!43;UBERON:0000344!1.43e-15!15;UBERON:0001242!2.72e-12!13;UBERON:0000060!2.72e-12!13;UBERON:0001262!2.72e-12!13;UBERON:0004786!2.72e-12!13;UBERON:0004923!5.83e-10!24;UBERON:0001007!3.13e-07!128;UBERON:0001555!3.13e-07!128;UBERON:0007026!3.13e-07!128;UBERON:0004119!5.45e-07!130;UBERON:0000925!5.45e-07!130;UBERON:0006595!5.45e-07!130;UBERON:0003350!9.94e-07!9;UBERON:0004808!9.94e-07!9;UBERON:0001277!9.94e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.72e-41,31;UBERON:0005409,8.28e-26,47;UBERON:0000344,8.38e-19,15;UBERON:0001242,9.80e-14,13;UBERON:0001262,9.80e-14,13;UBERON:0004786,9.80e-14,13;UBERON:0002108,8.79e-12,4;UBERON:0004923,4.99e-11,24;UBERON:0001007,6.68e-10,116;UBERON:0001555,6.68e-10,116;UBERON:0007026,6.68e-10,116;UBERON:0004119,1.20e-09,118;UBERON:0000925,1.20e-09,118;UBERON:0006595,1.20e-09,118;UBERON:0000331,2.53e-09,3;UBERON:0002116,2.53e-09,3;UBERON:0001204,2.53e-09,3;UBERON:0001168,2.53e-09,3;UBERON:0004921,6.33e-08,114;UBERON:0001962,1.31e-07,2;UBERON:0001961,1.31e-07,2;UBERON:0001744,1.31e-07,2 | |||
|phase1_expression=0,21.9854506812797,15.9249733786338,2.72217790176147,3.50627010962443,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3192271249275,19.9586074528438,17.2269589234506,10.3382879078178,7.32602191132023,2.28028103347649,3.2763916868791,5.09980174507201,0.635030673459631,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,10.3135720998782,0,0,0.257734922644187,2.21851877085677,2.00140239460383,3.23383564391351,3.32170343081158,3.45867804920423,6.28338022000674,5.76973768919337,5.8489226135736,3.59527763461689,1.29682829924817,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0.209088296014469,0.87345025498471,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.231768651889711,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,1.68342681497322,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr15:75693709..75693724,+ | |||
}} |
Revision as of 10:55, 13 September 2013
Short description: | p@chr15:75693709..75693724, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:75693709..75693724, + |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.34e-10 | 3 |
brush border epithelial cell | 1.77e-08 | 6 |
gut absorptive cell | 1.77e-08 | 6 |
enterocyte | 1.77e-08 | 6 |
columnar/cuboidal epithelial cell | 2.89e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.72e-41 | 31 |
gastrointestinal system | 8.28e-26 | 47 |
mucosa | 8.38e-19 | 15 |
intestinal mucosa | 9.80e-14 | 13 |
wall of intestine | 9.80e-14 | 13 |
gastrointestinal system mucosa | 9.80e-14 | 13 |
small intestine | 8.79e-12 | 4 |
organ component layer | 4.99e-11 | 24 |
digestive system | 6.68e-10 | 116 |
digestive tract | 6.68e-10 | 116 |
primitive gut | 6.68e-10 | 116 |
endoderm-derived structure | 1.20e-09 | 118 |
endoderm | 1.20e-09 | 118 |
presumptive endoderm | 1.20e-09 | 118 |
ileal mucosa | 2.53e-09 | 3 |
ileum | 2.53e-09 | 3 |
mucosa of small intestine | 2.53e-09 | 3 |
wall of small intestine | 2.53e-09 | 3 |
subdivision of digestive tract | 6.33e-08 | 114 |
gut-associated lymphoid tissue | 1.31e-07 | 2 |
mucosa-associated lymphoid tissue | 1.31e-07 | 2 |
lymphoid tissue | 1.31e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.