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FFCP PHASE1:Mm9::chr10:5151728..5151757,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=64009|HGNC=|MCL_coexpression_id=547|UniProt=F8WI20,Q6PI72,Q6ZWR6|association_with_transcript=-76bp_to_ENSMUST00000092721,NM_001079686,uc007egq.1_5end|description=CAGE_peak_5_at_Syne1_5end|id=chr10:5151728..5151757,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!6.10e-08!10;UBERON:0000411!6.10e-08!10;UBERON:0001950!6.10e-08!10;UBERON:0009854!2.90e-07!23;UBERON:0009856!2.90e-07!23;UBERON:0005057!4.12e-07!51;UBERON:0001049!5.94e-07!52;UBERON:0005068!5.94e-07!52;UBERON:0006241!5.94e-07!52;UBERON:0007135!5.94e-07!52;UBERON:0002107!6.78e-07!22;UBERON:0007499!6.78e-07!22;UBERON:0006925!6.78e-07!22;UBERON:0009497!6.78e-07!22;UBERON:0000015!6.78e-07!22;UBERON:0002423!6.78e-07!22;UBERON:0006235!6.78e-07!22;UBERON:0008835!6.78e-07!22;UBERON:0003894!6.78e-07!22;UBERON:0004161!6.78e-07!22;UBERON:0008836!6.78e-07!22;UBERON:0002020!9.51e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.45e-09,10;UBERON:0000411,9.45e-09,10;UBERON:0001950,9.45e-09,10;UBERON:0000073,4.36e-08,54;UBERON:0009854,5.74e-08,23;UBERON:0009856,5.74e-08,23;UBERON:0002020,7.21e-08,34;UBERON:0001049,1.17e-07,52;UBERON:0005068,1.17e-07,52;UBERON:0006241,1.17e-07,52;UBERON:0007135,1.17e-07,52;UBERON:0002107,1.49e-07,22;UBERON:0007499,1.49e-07,22;UBERON:0006925,1.49e-07,22;UBERON:0009497,1.49e-07,22;UBERON:0000015,1.49e-07,22;UBERON:0002423,1.49e-07,22;UBERON:0006235,1.49e-07,22;UBERON:0008835,1.49e-07,22;UBERON:0003894,1.49e-07,22;UBERON:0004161,1.49e-07,22;UBERON:0008836,1.49e-07,22;UBERON:0001017,5.72e-07,73|phase1_expression=0.640595388419176,0,0,0,0,0,0.467225281191051,2.45334314538995,0.281577444303333,0.936258105287974,0,0.239316476986009,2.9104124088305,2.01066925563694,2.6648780945253,3.03712901084739,6.29605690315332,4.10100814965709,3.56497527374921,1.69755860719212,1.78590909317247,2.38298282882125,3.6567970479451,0.159992422793407,0,0,0,0.430942465371778,0,0,1.10865255327652,0,1.84519436275371,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,1.56478268869608,0,0.439372365468944,0.388859798148567,0.279972843250725,1.43752564364972,1.17447824240415,9.42970784614748,4.03312558970957,0.257259436035947,0.573066879877513,0,2.63011399117477,2.11596391708813,2.53532561402472,0.338844532069132,0,0.449949858640699,1.97773272513395,0.7104801149461,0.898800331555214,0,0.103689612308478,0.135005938331691,0.210324961351382,1.99955689082663,2.65042249141936,0.489963196859816,0.575072826109418,0,1.10115880999389,4.59674417106676,5.52983519722476,1.58263545276233,3.47653045689157,2.08365348222704,3.07101298901519,5.6276261003168,3.81995619442025,3.53554302568401,4.41352210477219,4.28718725398191,0.302904773332736,0.68014404096107,0.869593466105033,2.58127163094416,0,2.15881276655127,11.695975514058,4.03224198387602,0.983110940922263,1.02258193546835,1.03914401841148,0.70667914902068,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,1.37020655662872,4.91981978929626,1.1875371125186,0.693941307064543,0.913396434936424,0.691846491768175,0.60289056221049,1.88141931417128,0.502666365318702,1.23597483867187,0.722996784599558,0,0.647067399789637,1.32504911076236,1.45462575940567,3.72783522436244,3.22058876712702,2.09446706813455,0.766371165625774,0.718890747035522,1.79970819298022,0.635351135365324,5.39246301857362,16.0125210986519,2.38743269014442,13.210648334613,13.8086346958378,6.2336413367868,8.59878694259116,0.916554274652847,0.622034853050465,0.505445516867349,1.89397670297827,0.520481771850815,0,0.360124259610698,0.60281927134286,1.15662048557257,1.40925092313335,1.40552586839593,2.58703370739016,0.431135985865684,0.378212160335639,0.351902248327898,0.657587197282725,1.11218899690239,1.0447564995665,0.823128545631774,1.39323986772945,0,0.51469581422943,0.284163499395593,1.65700618028402,1.64168241986767,1.2604344302271,0.946978942340841,0.983821158737019,0.308534225774757,0.465067889500816,0.804820204198858,0.817357396570186,0.822799249567402,0.820837320395476,0.729619285912702,0.292399974850665,0.878200461164203,0.671032093801859,3.15434922846191,1.85228302282712,1.32167513193519,0,0.426576501070468,0,0.38660238396628,1.81515172161008,2.2237804384487,2.47293313946327,0.474529061544512,3.12928013975621,3.77002813200404,2.78539060857611,3.11942539390592,0.898819408654221,0.216138049874694,0.398282546508734,0,2.05647322697512,0,1.83286195060783,1.74557238450863,2.38461787627083,3.28829993046138,2.36176236767363,2.98297582898612,1.72756029490521,1.48226313543574,1.66845105716094,1.76903095601883,2.24862112384854,2.84004169943904,2.17059443777175,2.80088436959562,4.02774592431135,4.21551589615092,6.31491250332587,7.18841032636773,6.32639611036456,6.24075346229121,8.33510297225469,7.71408878144222,6.75420929908714,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.670025029767263,0.476087281772027,0.390267295715598,0.315270288212382,1.10732344824387,0.318909537314974,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|EntrezGene=64009
|HGNC=
|MCL_coexpression_id=547
|UniProt=F8WI20,Q6PI72,Q6ZWR6
|association_with_transcript=-76bp_to_ENSMUST00000092721,NM_001079686,uc007egq.1_5end
|description=CAGE_peak_5_at_Syne1_5end
|id=chr10:5151728..5151757,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002021!6.10e-08!10;UBERON:0000411!6.10e-08!10;UBERON:0001950!6.10e-08!10;UBERON:0009854!2.90e-07!23;UBERON:0009856!2.90e-07!23;UBERON:0005057!4.12e-07!51;UBERON:0001049!5.94e-07!52;UBERON:0005068!5.94e-07!52;UBERON:0006241!5.94e-07!52;UBERON:0007135!5.94e-07!52;UBERON:0002107!6.78e-07!22;UBERON:0007499!6.78e-07!22;UBERON:0006925!6.78e-07!22;UBERON:0009497!6.78e-07!22;UBERON:0000015!6.78e-07!22;UBERON:0002423!6.78e-07!22;UBERON:0006235!6.78e-07!22;UBERON:0008835!6.78e-07!22;UBERON:0003894!6.78e-07!22;UBERON:0004161!6.78e-07!22;UBERON:0008836!6.78e-07!22;UBERON:0002020!9.51e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.45e-09,10;UBERON:0000411,9.45e-09,10;UBERON:0001950,9.45e-09,10;UBERON:0000073,4.36e-08,54;UBERON:0009854,5.74e-08,23;UBERON:0009856,5.74e-08,23;UBERON:0002020,7.21e-08,34;UBERON:0001049,1.17e-07,52;UBERON:0005068,1.17e-07,52;UBERON:0006241,1.17e-07,52;UBERON:0007135,1.17e-07,52;UBERON:0002107,1.49e-07,22;UBERON:0007499,1.49e-07,22;UBERON:0006925,1.49e-07,22;UBERON:0009497,1.49e-07,22;UBERON:0000015,1.49e-07,22;UBERON:0002423,1.49e-07,22;UBERON:0006235,1.49e-07,22;UBERON:0008835,1.49e-07,22;UBERON:0003894,1.49e-07,22;UBERON:0004161,1.49e-07,22;UBERON:0008836,1.49e-07,22;UBERON:0001017,5.72e-07,73
|phase1_expression=0.640595388419176,0,0,0,0,0,0.467225281191051,2.45334314538995,0.281577444303333,0.936258105287974,0,0.239316476986009,2.9104124088305,2.01066925563694,2.6648780945253,3.03712901084739,6.29605690315332,4.10100814965709,3.56497527374921,1.69755860719212,1.78590909317247,2.38298282882125,3.6567970479451,0.159992422793407,0,0,0,0.430942465371778,0,0,1.10865255327652,0,1.84519436275371,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,1.56478268869608,0,0.439372365468944,0.388859798148567,0.279972843250725,1.43752564364972,1.17447824240415,9.42970784614748,4.03312558970957,0.257259436035947,0.573066879877513,0,2.63011399117477,2.11596391708813,2.53532561402472,0.338844532069132,0,0.449949858640699,1.97773272513395,0.7104801149461,0.898800331555214,0,0.103689612308478,0.135005938331691,0.210324961351382,1.99955689082663,2.65042249141936,0.489963196859816,0.575072826109418,0,1.10115880999389,4.59674417106676,5.52983519722476,1.58263545276233,3.47653045689157,2.08365348222704,3.07101298901519,5.6276261003168,3.81995619442025,3.53554302568401,4.41352210477219,4.28718725398191,0.302904773332736,0.68014404096107,0.869593466105033,2.58127163094416,0,2.15881276655127,11.695975514058,4.03224198387602,0.983110940922263,1.02258193546835,1.03914401841148,0.70667914902068,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,1.37020655662872,4.91981978929626,1.1875371125186,0.693941307064543,0.913396434936424,0.691846491768175,0.60289056221049,1.88141931417128,0.502666365318702,1.23597483867187,0.722996784599558,0,0.647067399789637,1.32504911076236,1.45462575940567,3.72783522436244,3.22058876712702,2.09446706813455,0.766371165625774,0.718890747035522,1.79970819298022,0.635351135365324,5.39246301857362,16.0125210986519,2.38743269014442,13.210648334613,13.8086346958378,6.2336413367868,8.59878694259116,0.916554274652847,0.622034853050465,0.505445516867349,1.89397670297827,0.520481771850815,0,0.360124259610698,0.60281927134286,1.15662048557257,1.40925092313335,1.40552586839593,2.58703370739016,0.431135985865684,0.378212160335639,0.351902248327898,0.657587197282725,1.11218899690239,1.0447564995665,0.823128545631774,1.39323986772945,0,0.51469581422943,0.284163499395593,1.65700618028402,1.64168241986767,1.2604344302271,0.946978942340841,0.983821158737019,0.308534225774757,0.465067889500816,0.804820204198858,0.817357396570186,0.822799249567402,0.820837320395476,0.729619285912702,0.292399974850665,0.878200461164203,0.671032093801859,3.15434922846191,1.85228302282712,1.32167513193519,0,0.426576501070468,0,0.38660238396628,1.81515172161008,2.2237804384487,2.47293313946327,0.474529061544512,3.12928013975621,3.77002813200404,2.78539060857611,3.11942539390592,0.898819408654221,0.216138049874694,0.398282546508734,0,2.05647322697512,0,1.83286195060783,1.74557238450863,2.38461787627083,3.28829993046138,2.36176236767363,2.98297582898612,1.72756029490521,1.48226313543574,1.66845105716094,1.76903095601883,2.24862112384854,2.84004169943904,2.17059443777175,2.80088436959562,4.02774592431135,4.21551589615092,6.31491250332587,7.18841032636773,6.32639611036456,6.24075346229121,8.33510297225469,7.71408878144222,6.75420929908714,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.670025029767263,0.476087281772027,0.390267295715598,0.315270288212382,1.10732344824387,0.318909537314974,0.491589944147214,0.690739927463582,0.289298117163023,4.52373851817817,3.26343410291226,0,0.275936746304732,2.40825884981688,3.7507739709505,0,0,2.2085575359138,0.390438744296638,2.15423397732799,0.955875191810208,0.222798674082394,0.283076530788832,0.809621403349789,1.46127928955656,1.97643888973262,20.2432429345738,0.141940085208269,1.95872164033981,1.46598263418218,0.989820737835213,0,1.45668381692989,0.906970670894253,0.754420319023592,0.885905678642318,1.53717573971964,2.06742634534577,1.45413491791002,1.78248689192361,0,1.05418608574999,0,1.70219802876894,0.720244376125241,0.258717367565509,0.428674070063185,0.709360934569094,1.42695054081656,0.987294123612726,0.304464949114599,3.75474732901937,2.1183207086382,0,1.31909002353184,2.42196640043858,1.20625849856312,0.954978752025092,1.47726809770555,0.874442509889552,3.70850604021019,3.75915937755276,1.03193433981611,2.77791791054568,4.70921142511728,4.51090951479383,2.97411625168479,2.37969801991397,1.6794174278839,1.24379976423981,0,0.949007980743406,0.406638934253697,0.324016022465404,0.627264888043406,0.218362563746178,0.404593039154462,1.32245529160537,0.26175594198403,5.05498395837992,1.24267862617385,0,0.598066184175915,0.496375471371293,0.194451188344048,0.258319646955462,0.337912250981556,0.821500670520278,0,0.419437377702843,0.483168241652012,0.288030006257865,4.10814456816632,0,0.718976700153791,0.77952493786677,1.61124026100733,1.58945083825012,4.20684073319891,3.10148007066612,4.13962444787405,5.86792411243499,5.14213544197887,5.16526767920688,4.13710919053417,5.72696820689688,0.680191150845634,1.55390167361845,1.43542170575161,1.51096154727671,2.12508553435409,0.750729901804728,0.36630324853453,0.214368379079066,0.501572104035363,10.1655331671072,8.28585425712918,16.0410743763031,6.18671456437275,15.0718154349541,24.1726047164704,14.1754725048679,11.7083512838297,16.7662691324156,17.0860902878101,0.415149390336707,1.19707462020309,2.21953687480374,1.94485373654635,0.838452650511929,0.551530525350042,0.888986911206461,1.44224540067226,1.28367683836726,0.252697211763798,1.2673964994512,1.69763707247469,0.936415074698824,1.02440243847791,1.03383844120104,2.38146845641537,2.0859178670074,1.54327376370964,1.23625770240992,1.61918812147837,2.05721551431249,1.4198064492747,1.66905332963125,0.726732083161643,1.03520318456864,1.4384483341585,1.28049581010941,1.8414879800649,1.7654534799962,1.68342681497322,1.06771516311757,0.788035859004508,1.22769312950907,0.619747364743864,0.964533054905707,0.999242311751784,1.40358965067245,2.57845264857958,1.72159498861959,0.661774257358546,1.15933917810211
|short_description=p5@Syne1
}}

Revision as of 16:51, 12 September 2013

Short description:p5@Syne1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Syne1_5end
Coexpression cluster:MCL_coexpression_mm9:547
Association with transcript: -76bp_to_ENSMUST00000092721, NM_001079686, uc007egq.1_5end
EntrezGene:Syne1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Syne1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.01
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H94.92
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D816.01
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D513.21
cortex, neonate N30.CNhs11107.1392-42F213.81
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B28.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.38
kidney, neonate N10.CNhs11206.758-6D53.29
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F32.98
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F44.22
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A38.34
liver, neonate N25.CNhs11198.1368-26H17.71
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I920.24
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H14.51
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I15.05
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F84.21
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C44.14
thymus, neonate N07.CNhs11211.713-19D35.87
thymus, neonate N10.CNhs11194.748-24E45.14
thymus, neonate N20.CNhs11186.820-7A25.17
thymus, neonate N25.CNhs11125.1362-25G74.14
thymus, neonate N30.CNhs11132.1393-42G25.73
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.17
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.77
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.09
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe9.45e-0910
visual cortex9.45e-0910
neocortex9.45e-0910
regional part of nervous system4.36e-0854
digestive tract diverticulum5.74e-0823
sac5.74e-0823
gray matter7.21e-0834
neural tube1.17e-0752
neural rod1.17e-0752
future spinal cord1.17e-0752
neural keel1.17e-0752
liver1.49e-0722
epithelial sac1.49e-0722
digestive gland1.49e-0722
epithelium of foregut-midgut junction1.49e-0722
anatomical boundary1.49e-0722
hepatobiliary system1.49e-0722
foregut-midgut junction1.49e-0722
hepatic diverticulum1.49e-0722
liver primordium1.49e-0722
septum transversum1.49e-0722
liver bud1.49e-0722
central nervous system5.72e-0773







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