FFCP PHASE1:Mm9::chr9:103130780..103130787,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22041|HGNC=|MCL_coexpression_id=157|UniProt=D3YYR8|association_with_transcript=-8bp_to_ENSMUST00000126359_5end|description=CAGE_peak_20_at_Trf_5end|id=chr9:103130780..103130787,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!6.33e-18!3;UBERON:0000478!6.33e-18!3;UBERON:0000158!6.33e-18!3;UBERON:0001911!7.08e-13!2;UBERON:0000076!7.08e-13!2;UBERON:0005333!7.08e-13!2;UBERON:0008425!7.08e-13!2;UBERON:0005311!7.08e-13!2;UBERON:0001987!1.77e-12!2;UBERON:0003124!1.77e-12!2;UBERON:0004340!1.77e-12!2;UBERON:0002365!2.05e-10!25;UBERON:0002330!2.05e-10!25;UBERON:0003100!9.70e-09!11;UBERON:0002530!2.56e-07!65;UBERON:0000305!4.10e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.68e-58,2;UBERON:0000076,1.68e-58,2;UBERON:0005333,1.68e-58,2;UBERON:0008425,1.68e-58,2;UBERON:0005311,1.68e-58,2;UBERON:0003100,1.34e-24,11;UBERON:0001987,1.33e-15,2;UBERON:0003124,1.33e-15,2;UBERON:0004340,1.33e-15,2;UBERON:0005631,7.15e-11,3;UBERON:0000478,7.15e-11,3;UBERON:0000158,7.15e-11,3;UBERON:0005085,4.49e-10,13;UBERON:0005795,1.73e-08,4;UBERON:0000995,1.73e-08,4;UBERON:0005153,5.82e-08,17;UBERON:0003975,4.77e-07,5;UBERON:0005157,6.34e-07,20|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0,0,0.741584903203122,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.505157755894224,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.39293554924747,14.3487108078461,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,2.96564899209348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p20@Trf}} | ||
|EntrezGene=22041 | |||
|HGNC= | |||
|MCL_coexpression_id=157 | |||
|UniProt=D3YYR8 | |||
|association_with_transcript=-8bp_to_ENSMUST00000126359_5end | |||
|description=CAGE_peak_20_at_Trf_5end | |||
|id=chr9:103130780..103130787,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.33e-18!3;UBERON:0000478!6.33e-18!3;UBERON:0000158!6.33e-18!3;UBERON:0001911!7.08e-13!2;UBERON:0000076!7.08e-13!2;UBERON:0005333!7.08e-13!2;UBERON:0008425!7.08e-13!2;UBERON:0005311!7.08e-13!2;UBERON:0001987!1.77e-12!2;UBERON:0003124!1.77e-12!2;UBERON:0004340!1.77e-12!2;UBERON:0002365!2.05e-10!25;UBERON:0002330!2.05e-10!25;UBERON:0003100!9.70e-09!11;UBERON:0002530!2.56e-07!65;UBERON:0000305!4.10e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.68e-58,2;UBERON:0000076,1.68e-58,2;UBERON:0005333,1.68e-58,2;UBERON:0008425,1.68e-58,2;UBERON:0005311,1.68e-58,2;UBERON:0003100,1.34e-24,11;UBERON:0001987,1.33e-15,2;UBERON:0003124,1.33e-15,2;UBERON:0004340,1.33e-15,2;UBERON:0005631,7.15e-11,3;UBERON:0000478,7.15e-11,3;UBERON:0000158,7.15e-11,3;UBERON:0005085,4.49e-10,13;UBERON:0005795,1.73e-08,4;UBERON:0000995,1.73e-08,4;UBERON:0005153,5.82e-08,17;UBERON:0003975,4.77e-07,5;UBERON:0005157,6.34e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0,0,0.741584903203122,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.505157755894224,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.39293554924747,14.3487108078461,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,2.96564899209348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p20@Trf | |||
}} |
Revision as of 16:39, 14 September 2013
Short description: | p20@Trf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_Trf_5end |
Coexpression cluster: | MCL_coexpression_mm9:157 |
Association with transcript: | -8bp_to_ENSMUST00000126359_5end |
EntrezGene: | Trf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.68e-58 | 2 |
external ectoderm | 1.68e-58 | 2 |
mammary bud | 1.68e-58 | 2 |
mammary ridge | 1.68e-58 | 2 |
mammary placode | 1.68e-58 | 2 |
female organism | 1.34e-24 | 11 |
placenta | 1.33e-15 | 2 |
chorion | 1.33e-15 | 2 |
allantois | 1.33e-15 | 2 |
extraembryonic membrane | 7.15e-11 | 3 |
extraembryonic structure | 7.15e-11 | 3 |
membranous layer | 7.15e-11 | 3 |
ectodermal placode | 4.49e-10 | 13 |
embryonic uterus | 1.73e-08 | 4 |
uterus | 1.73e-08 | 4 |
epithelial bud | 5.82e-08 | 17 |
internal female genitalia | 4.77e-07 | 5 |
epithelial fold | 6.34e-07 | 20 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.