FFCP PHASE1:Mm9::chr5:34892244..34892280,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=24055|HGNC=|MCL_coexpression_id=108|UniProt=E9QJU7,Q5U3L0|association_with_transcript=19bp_to_ENSMUST00000118545,NM_001145859,uc008xco.2_5end|description=CAGE_peak_2_at_Sh3bp2_5end|id=chr5:34892244..34892280,+|ontology_enrichment_celltype=CL:0000540!7.69e-07!33;CL:0000047!7.69e-07!33;CL:0000031!7.69e-07!33;CL:0000404!7.69e-07!33|ontology_enrichment_celltype_v019_2=CL:0000540,8.99e-07,33;CL:0000047,8.99e-07,33;CL:0000031,8.99e-07,33;CL:0000404,8.99e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=4.96461426024861,1.74487703819681,1.36499771816861,0.90739263392049,0.500895729946347,4.02910252588535,3.97141489012394,0.774739940649458,2.81577444303333,5.38348410540585,0.171217968225505,1.19658238493005,1.36960583944965,0.874204024189974,1.33243904726265,0.607425802169478,2.09868563438444,0.315462165358238,0,0.42438965179803,0.510259740906419,0,0,1.43993180514066,1.83527424853736,1.14846392823004,0.86152399231815,2.15471232685889,0.950117097281869,1.26015064879965,1.10865255327652,0.635030673459631,0.61506478758457,0,4.33277429626912,3.15845826181135,4.69589519403449,0,0,0.523523743973798,0,0,0,2.51793635951155,2.93993100536592,3.85448179539531,3.9119567217402,1.74420125104357,1.97717564461025,0.777719596297134,0.979904951377538,1.43752564364972,0.167782606057736,0.725362142011344,1.00828139742739,2.31533492432352,2.57880095944881,1.54701627683233,14.566785181891,16.398720357433,12.6766280701236,2.71075625655306,3.55717918444456,0,0,0.7104801149461,0.599200221036809,0,21.1526809109294,22.680997639724,20.4015212510841,6.28432165688368,4.19650227808066,12.3715707207104,14.2809751817172,17.4651569455904,1.10115880999389,0.383062014255563,0.768032666281217,14.7712642257817,18.2060410768795,15.106487746146,0.558365998002762,0,0.763991238884051,6.77645746589436,7.11858403995515,14.5391567743734,0.454357159999104,0.604572480854284,1.73918693221007,0,0,0,0,0,0.140444420131752,1.02258193546835,0.259786004602869,0.35333957451034,3.66192891419369,0,0,0,1.5154372870785,1.77351905832569,2.02209778005913,0.5709193985953,1.29468941823586,0.29688427812965,5.20455980298408,2.43572382649713,2.07553947530453,1.50722640552623,1.52865319276416,0.628332956648377,0.247194967734374,0.289198713839823,0.884610551949874,2.58826959915855,1.76673214768315,1.45462575940567,0,0.292780797011547,0.628340120440365,1.78819938646014,1.55759661857696,0.599902730993408,1.14363204365758,0.599162557619291,0,17.4659549436882,0.173824320192276,0.767146371990992,0.83115217823824,0.162241263067758,6.92507674182151,0.622034853050465,0.252722758433675,0.420883711772948,9.49879233627737,5.9774547152703,7.74267158163002,7.08312643827861,5.98721192531685,7.43059577652129,6.65282244374075,1.55222022443409,9.91612767491074,9.8335161687266,9.67731182901719,7.67185063496512,9.45360647367033,4.52727816478817,5.55611768301447,6.76716507182877,0.702213187313235,0.257347907114715,1.13665399758237,6.62802472113606,6.80125573945179,2.34080679899319,3.07768156260773,2.95146347621106,3.08534225774756,1.86027155800326,1.87791380979733,2.10177616260905,1.6455984991348,2.79084688934462,2.02672023864639,0.877199924551994,1.53685080703735,0.402619256281115,1.05144974282064,26.8581038309932,0,1.05780226665418,7.25180051819795,5.34144345279009,4.25262622362908,3.22693639397348,1.33426826306922,2.47293313946327,4.2707615539006,2.14108641141214,1.75934646160189,2.18852119245266,3.11942539390592,0,1.72910439899755,2.38969527905241,8.34538764193559,4.56994050438915,11.270773567308,3.25842124552503,2.90928730751439,4.48869247298039,1.83385957660346,0.442830443938806,0.784993639206874,0.370191491765402,0,2.66952169145751,3.34150291692445,1.79889689907883,3.04290182082754,2.17059443777175,1.52775511068852,0.863088412352432,0.972811360650212,0,0,1.11642284300551,0.624075346229121,0,0.179397413521912,0.482443521363367,2.40179147216586,3.97931964718018,8.14824882210129,5.7713329163564,7.27539769694356,5.19269398069629,3.57065461329021,3.90267295715598,5.2019597555043,6.86540537911202,5.10255259703959,0.983179888294428,1.72684981865896,2.02508682014116,0,0.54390568381871,0,1.10374698521893,0.321101179975584,0.234423373184406,4.75411341592359,1.26235463602186,2.52406575533005,1.56175497718655,3.66219776145758,3.82350076724083,5.34716817797746,6.51076020814315,5.66734982344852,3.79932615284705,3.55759000151871,0,2.41298144854057,6.94455854302295,7.00413925220377,4.28922319728592,0,6.5550771761845,3.62788268357701,3.20628635585027,2.36241514304618,1.22974059177571,1.55056975900933,4.36240475373007,4.27796854061666,0.948110273807448,0,1.03135543248187,1.36175842301515,6.84232157318979,8.40831444587904,4.71541477069503,3.19212420556092,5.88617098086833,4.44282355625727,3.65357938937519,4.22409074514679,1.27099242518292,0,4.45192882941996,7.91175690809937,5.91066664295927,5.61050016814741,5.25250879184196,3.49777003955821,0.556275906031529,0.854354403989263,4.12773735926445,2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| ||
|EntrezGene=24055 | |||
|HGNC= | |||
|MCL_coexpression_id=108 | |||
|UniProt=E9QJU7,Q5U3L0 | |||
|association_with_transcript=19bp_to_ENSMUST00000118545,NM_001145859,uc008xco.2_5end | |||
|description=CAGE_peak_2_at_Sh3bp2_5end | |||
|id=chr5:34892244..34892280,+ | |||
|ontology_enrichment_celltype=CL:0000540!7.69e-07!33;CL:0000047!7.69e-07!33;CL:0000031!7.69e-07!33;CL:0000404!7.69e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.99e-07,33;CL:0000047,8.99e-07,33;CL:0000031,8.99e-07,33;CL:0000404,8.99e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=4.96461426024861,1.74487703819681,1.36499771816861,0.90739263392049,0.500895729946347,4.02910252588535,3.97141489012394,0.774739940649458,2.81577444303333,5.38348410540585,0.171217968225505,1.19658238493005,1.36960583944965,0.874204024189974,1.33243904726265,0.607425802169478,2.09868563438444,0.315462165358238,0,0.42438965179803,0.510259740906419,0,0,1.43993180514066,1.83527424853736,1.14846392823004,0.86152399231815,2.15471232685889,0.950117097281869,1.26015064879965,1.10865255327652,0.635030673459631,0.61506478758457,0,4.33277429626912,3.15845826181135,4.69589519403449,0,0,0.523523743973798,0,0,0,2.51793635951155,2.93993100536592,3.85448179539531,3.9119567217402,1.74420125104357,1.97717564461025,0.777719596297134,0.979904951377538,1.43752564364972,0.167782606057736,0.725362142011344,1.00828139742739,2.31533492432352,2.57880095944881,1.54701627683233,14.566785181891,16.398720357433,12.6766280701236,2.71075625655306,3.55717918444456,0,0,0.7104801149461,0.599200221036809,0,21.1526809109294,22.680997639724,20.4015212510841,6.28432165688368,4.19650227808066,12.3715707207104,14.2809751817172,17.4651569455904,1.10115880999389,0.383062014255563,0.768032666281217,14.7712642257817,18.2060410768795,15.106487746146,0.558365998002762,0,0.763991238884051,6.77645746589436,7.11858403995515,14.5391567743734,0.454357159999104,0.604572480854284,1.73918693221007,0,0,0,0,0,0.140444420131752,1.02258193546835,0.259786004602869,0.35333957451034,3.66192891419369,0,0,0,1.5154372870785,1.77351905832569,2.02209778005913,0.5709193985953,1.29468941823586,0.29688427812965,5.20455980298408,2.43572382649713,2.07553947530453,1.50722640552623,1.52865319276416,0.628332956648377,0.247194967734374,0.289198713839823,0.884610551949874,2.58826959915855,1.76673214768315,1.45462575940567,0,0.292780797011547,0.628340120440365,1.78819938646014,1.55759661857696,0.599902730993408,1.14363204365758,0.599162557619291,0,17.4659549436882,0.173824320192276,0.767146371990992,0.83115217823824,0.162241263067758,6.92507674182151,0.622034853050465,0.252722758433675,0.420883711772948,9.49879233627737,5.9774547152703,7.74267158163002,7.08312643827861,5.98721192531685,7.43059577652129,6.65282244374075,1.55222022443409,9.91612767491074,9.8335161687266,9.67731182901719,7.67185063496512,9.45360647367033,4.52727816478817,5.55611768301447,6.76716507182877,0.702213187313235,0.257347907114715,1.13665399758237,6.62802472113606,6.80125573945179,2.34080679899319,3.07768156260773,2.95146347621106,3.08534225774756,1.86027155800326,1.87791380979733,2.10177616260905,1.6455984991348,2.79084688934462,2.02672023864639,0.877199924551994,1.53685080703735,0.402619256281115,1.05144974282064,26.8581038309932,0,1.05780226665418,7.25180051819795,5.34144345279009,4.25262622362908,3.22693639397348,1.33426826306922,2.47293313946327,4.2707615539006,2.14108641141214,1.75934646160189,2.18852119245266,3.11942539390592,0,1.72910439899755,2.38969527905241,8.34538764193559,4.56994050438915,11.270773567308,3.25842124552503,2.90928730751439,4.48869247298039,1.83385957660346,0.442830443938806,0.784993639206874,0.370191491765402,0,2.66952169145751,3.34150291692445,1.79889689907883,3.04290182082754,2.17059443777175,1.52775511068852,0.863088412352432,0.972811360650212,0,0,1.11642284300551,0.624075346229121,0,0.179397413521912,0.482443521363367,2.40179147216586,3.97931964718018,8.14824882210129,5.7713329163564,7.27539769694356,5.19269398069629,3.57065461329021,3.90267295715598,5.2019597555043,6.86540537911202,5.10255259703959,0.983179888294428,1.72684981865896,2.02508682014116,0,0.54390568381871,0,1.10374698521893,0.321101179975584,0.234423373184406,4.75411341592359,1.26235463602186,2.52406575533005,1.56175497718655,3.66219776145758,3.82350076724083,5.34716817797746,6.51076020814315,5.66734982344852,3.79932615284705,3.55759000151871,0,2.41298144854057,6.94455854302295,7.00413925220377,4.28922319728592,0,6.5550771761845,3.62788268357701,3.20628635585027,2.36241514304618,1.22974059177571,1.55056975900933,4.36240475373007,4.27796854061666,0.948110273807448,0,1.03135543248187,1.36175842301515,6.84232157318979,8.40831444587904,4.71541477069503,3.19212420556092,5.88617098086833,4.44282355625727,3.65357938937519,4.22409074514679,1.27099242518292,0,4.45192882941996,7.91175690809937,5.91066664295927,5.61050016814741,5.25250879184196,3.49777003955821,0.556275906031529,0.854354403989263,4.12773735926445,2.40752885580625,1.88368457004691,0.546776910884101,1.37266903923914,2.54967644990783,3.07893195112048,3.45499934511059,1.90934123603023,9.33191181064349,6.70954241518601,3.56417624711944,3.76358932826044,2.83871332870031,2.02296519577231,2.81021749466142,0.523511883968059,1.94422459937689,0,0.56369293868419,4.78452947340732,3.14371131868485,6.61134040369762,4.26227417476513,5.23763989021412,4.10750335260139,3.6457227756306,1.57289016638566,0,0.576060012515731,2.8441000856536,1.82452693761148,3.90301637226344,3.89762468933385,3.58053391334963,1.98681354781265,2.40390899039938,3.10148007066612,2.625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| |||
|short_description=p2@Sh3bp2 | |||
}} |
Revision as of 07:32, 14 September 2013
Short description: | p2@Sh3bp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sh3bp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 19bp_to_ENSMUST00000118545, NM_001145859, uc008xco.2_5end |
EntrezGene: | Sh3bp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.99e-07 | 33 |
neuronal stem cell | 8.99e-07 | 33 |
neuroblast | 8.99e-07 | 33 |
electrically signaling cell | 8.99e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.