FFCP PHASE1:Mm9::chr12:112615649..112615713,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=217866|HGNC=|MCL_coexpression_id=24|UniProt=Q7TT50,B2RQQ7|association_with_transcript=215bp_to_ENSMUST00000041965,NM_183016,uc007pct.2_5end|description=CAGE_peak_2_at_Cdc42bpb_5end|id=chr12:112615649..112615713,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.40e-10!43;UBERON:0007023!7.65e-10!51;UBERON:0005409!3.17e-09!59|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.75e-12,31;UBERON:0005409,2.26e-10,47;UBERON:0007023,7.61e-10,51|phase1_expression=8.96833543786846,165.414343221057,125.579790071512,131.874396129778,156.780363473207,37.9407154520871,40.6485994636215,0.387369970324729,0,0,0,0.0797721589953364,0,0.0874204024189974,0.999329285446988,1.01237633694913,0,1.10411757875383,1.37114433605739,1.27316895539409,19.9001298953503,0,0,39.6781208527649,32.1172993494038,106.232913361279,67.6296333969747,57.9617615925042,44.4654801527915,55.9506888067046,32.5943850663298,0,0,0,10.3986583110459,9.97407872150954,10.0042984568561,0.418531630736908,0,0,0,0,0,10.8271263458996,13.2803779897564,7.89251034295231,8.60630478782843,8.72100625521786,11.8630538676615,14.7766723296455,13.4386964760348,10.062679505548,0.838913030288682,0,0,14.9210472900849,13.1805382371828,13.4074743992135,6.27181028664753,2.64495489636016,6.33831403506179,12.5372476865579,8.00365316500025,5.39939830368839,1.97773272513395,7.104801149461,4.19440154725767,6.91592949578798,7.67303131082735,6.75029691658453,9.25429829946081,7.14127461009509,5.30084498283872,9.79926393719632,10.543001812006,11.0306254393203,4.40463523997555,12.3856717942632,10.4452442614246,8.30883612700221,11.8019060247108,10.4182674111352,10.6089539620525,12.380777420697,12.9878510610289,8.83885756421003,5.41012387036591,6.89677949553612,6.58817881998701,10.5044468548432,44.059402282655,35.2773789562368,10.879541339324,19.9690180905992,33.1385972898311,37.1862316290789,15.0275529540974,12.2709832256202,7.53379413348319,3.88673531961374,8.59144860637751,11.5493829672886,7.64415719119937,14.2213340630666,7.79367747640371,6.08063677140237,9.60496445528088,26.0339245759457,7.50919862576798,26.1258164754092,15.0932234286538,20.7036525252256,17.5267777914604,17.3331036635516,22.8122091843267,21.4889871173745,47.2142388372654,32.1010572362204,5.30766331169925,16.5002186946357,9.93786833071771,9.21262980956922,26.0948465705371,16.6885054296582,18.850203613211,51.0914110417183,0.718890747035522,0.599902730993408,0.127070227073065,17.2259235315546,31.5675415944852,18.5968441127039,23.8139318663419,27.872984849006,15.7918913865266,24.4984307232314,18.3310854930569,12.1918831197891,12.3834151632501,13.6787206326208,5.46505860443356,6.66716102857071,6.66229880279792,7.23383125611432,10.0013653752452,6.40568601424249,8.4331552103756,14.7460921321239,4.095791865724,9.8335161687266,12.3165786914764,11.1789823538063,15.0145514581823,14.626590993931,16.4625709126355,11.5439874754726,0,0,0.284163499395593,7.04227626620706,4.92504725960302,9.00310307305074,7.10234206755631,8.65762619688577,10.4901636763417,8.8362899005155,15.0233104783787,13.6615450569588,12.1774288935976,13.790066982644,18.4836885764551,18.8597983778679,22.1745616443961,22.009852676701,24.1833440848746,12.7601719350313,97.8039597632042,41.2542883995129,10.024547775156,14.6309103272076,16.2373001265838,29.6474781196314,25.3510969983152,27.202264534096,55.0453711391634,32.9397909448022,38.4542869464412,37.005903799654,33.5338229844887,43.1433316154026,50.7924417205531,57.7509692437665,4.1726938209678,9.71112357182695,15.7790829942313,12.0154283428735,10.0855293327165,16.7624609537861,19.666563045644,25.0937251565324,21.5088257142683,31.0960853082937,41.799820419288,6.50695912292767,5.70021085828289,5.8464149220062,3.85434230638156,6.99413763282009,11.2035374783825,21.8649064462616,13.943629502653,13.1789478330279,28.7536413054709,23.8170206507842,20.2824487524464,30.0568864757063,33.5473163285976,53.0687873499704,25.1264338626582,7.39016505904891,7.98528384565927,9.84521497496091,7.74477819352057,13.5680068527871,21.1858840388552,28.8797798829542,24.2758121923534,21.9250042752287,23.5993057613081,24.2517705779292,23.6578425156277,24.3010418416939,9.04747703635634,5.98296252200581,11.3105782794378,11.5893433447988,13.9679013289379,13.1277088983268,7.37707254195039,15.1482556322624,9.14973836307144,5.46614242015294,6.24727853425117,8.36390792833932,10.4715376818725,7.35998980050964,10.1202675418724,8.18316402151673,10.6727700045561,23.4564560987919,19.1619115031163,15.4917075190512,18.2433394476005,20.951205617512,13.2745138339963,12.624593080059,8.16273603804828,6.41257271170054,12.4026795009925,12.2974059177571,25.8428293168221,11.6330793432802,9.9819265947722,17.0659849285341,22.1379078007497,19.5957532171555,13.6175842301515,10.2634823597847,11.7716402242307,12.2172109968008,15.7832807941623,17.3017753074008,13.1639216481697,19.1812917942198,22.2938122660525,29.0209937083434,18.96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| ||
|EntrezGene=217866 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=Q7TT50,B2RQQ7 | |||
|association_with_transcript=215bp_to_ENSMUST00000041965,NM_183016,uc007pct.2_5end | |||
|description=CAGE_peak_2_at_Cdc42bpb_5end | |||
|id=chr12:112615649..112615713,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.40e-10!43;UBERON:0007023!7.65e-10!51;UBERON:0005409!3.17e-09!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.75e-12,31;UBERON:0005409,2.26e-10,47;UBERON:0007023,7.61e-10,51 | |||
|phase1_expression=8.96833543786846,165.414343221057,125.579790071512,131.874396129778,156.780363473207,37.9407154520871,40.6485994636215,0.387369970324729,0,0,0,0.0797721589953364,0,0.0874204024189974,0.999329285446988,1.01237633694913,0,1.10411757875383,1.37114433605739,1.27316895539409,19.9001298953503,0,0,39.6781208527649,32.1172993494038,106.232913361279,67.6296333969747,57.9617615925042,44.4654801527915,55.9506888067046,32.5943850663298,0,0,0,10.3986583110459,9.97407872150954,10.0042984568561,0.418531630736908,0,0,0,0,0,10.8271263458996,13.2803779897564,7.89251034295231,8.60630478782843,8.72100625521786,11.8630538676615,14.7766723296455,13.4386964760348,10.062679505548,0.838913030288682,0,0,14.9210472900849,13.1805382371828,13.4074743992135,6.27181028664753,2.64495489636016,6.33831403506179,12.5372476865579,8.00365316500025,5.39939830368839,1.97773272513395,7.104801149461,4.19440154725767,6.91592949578798,7.67303131082735,6.75029691658453,9.25429829946081,7.14127461009509,5.30084498283872,9.79926393719632,10.543001812006,11.0306254393203,4.40463523997555,12.3856717942632,10.4452442614246,8.30883612700221,11.8019060247108,10.4182674111352,10.6089539620525,12.380777420697,12.9878510610289,8.83885756421003,5.41012387036591,6.89677949553612,6.58817881998701,10.5044468548432,44.059402282655,35.2773789562368,10.879541339324,19.9690180905992,33.1385972898311,37.1862316290789,15.0275529540974,12.2709832256202,7.53379413348319,3.88673531961374,8.59144860637751,11.5493829672886,7.64415719119937,14.2213340630666,7.79367747640371,6.08063677140237,9.60496445528088,26.0339245759457,7.50919862576798,26.1258164754092,15.0932234286538,20.7036525252256,17.5267777914604,17.3331036635516,22.8122091843267,21.4889871173745,47.2142388372654,32.1010572362204,5.30766331169925,16.5002186946357,9.93786833071771,9.21262980956922,26.0948465705371,16.6885054296582,18.850203613211,51.0914110417183,0.718890747035522,0.599902730993408,0.127070227073065,17.2259235315546,31.5675415944852,18.5968441127039,23.8139318663419,27.872984849006,15.7918913865266,24.4984307232314,18.3310854930569,12.1918831197891,12.3834151632501,13.6787206326208,5.46505860443356,6.66716102857071,6.66229880279792,7.23383125611432,10.0013653752452,6.40568601424249,8.4331552103756,14.7460921321239,4.095791865724,9.8335161687266,12.3165786914764,11.1789823538063,15.0145514581823,14.626590993931,16.4625709126355,11.5439874754726,0,0,0.284163499395593,7.04227626620706,4.92504725960302,9.00310307305074,7.10234206755631,8.65762619688577,10.4901636763417,8.8362899005155,15.0233104783787,13.6615450569588,12.1774288935976,13.790066982644,18.4836885764551,18.8597983778679,22.1745616443961,22.009852676701,24.1833440848746,12.7601719350313,97.8039597632042,41.2542883995129,10.024547775156,14.6309103272076,16.2373001265838,29.6474781196314,25.3510969983152,27.202264534096,55.0453711391634,32.9397909448022,38.4542869464412,37.005903799654,33.5338229844887,43.1433316154026,50.7924417205531,57.7509692437665,4.1726938209678,9.71112357182695,15.7790829942313,12.0154283428735,10.0855293327165,16.7624609537861,19.666563045644,25.0937251565324,21.5088257142683,31.0960853082937,41.799820419288,6.50695912292767,5.70021085828289,5.8464149220062,3.85434230638156,6.99413763282009,11.2035374783825,21.8649064462616,13.943629502653,13.1789478330279,28.7536413054709,23.8170206507842,20.2824487524464,30.0568864757063,33.5473163285976,53.0687873499704,25.1264338626582,7.39016505904891,7.98528384565927,9.84521497496091,7.74477819352057,13.5680068527871,21.1858840388552,28.8797798829542,24.2758121923534,21.9250042752287,23.5993057613081,24.2517705779292,23.6578425156277,24.3010418416939,9.04747703635634,5.98296252200581,11.3105782794378,11.5893433447988,13.9679013289379,13.1277088983268,7.37707254195039,15.1482556322624,9.14973836307144,5.46614242015294,6.24727853425117,8.36390792833932,10.4715376818725,7.35998980050964,10.1202675418724,8.18316402151673,10.6727700045561,23.4564560987919,19.1619115031163,15.4917075190512,18.2433394476005,20.951205617512,13.2745138339963,12.624593080059,8.16273603804828,6.41257271170054,12.4026795009925,12.2974059177571,25.8428293168221,11.6330793432802,9.9819265947722,17.0659849285341,22.1379078007497,19.5957532171555,13.6175842301515,10.2634823597847,11.7716402242307,12.2172109968008,15.7832807941623,17.3017753074008,13.1639216481697,19.1812917942198,22.2938122660525,29.0209937083434,18.9654422327267,20.940554123568,17.115229229766,15.6813604813205,10.3853939282729,13.1312719796049,53.6324739398925,13.9068976507882,3.2465467351592,10.3193433981611,5.37064129372164,2.44878994106098,2.59719032669948,3.66045077130436,1.35982743995084,2.09927178485487,1.38199973804424,24.821436068393,13.6024477239888,13.2157653632452,15.768779759983,19.6542998253601,25.766782522049,24.6801753884222,33.3919961130357,43.1897304273649,35.9033476018266,41.629733976824,11.2738587736838,11.2137409532984,10.5893433892542,16.7228021975881,12.2701832303845,13.1785777882807,14.787012069365,14.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| |||
|short_description=p2@Cdc42bpb | |||
}} | |||
Revision as of 22:18, 12 September 2013
| Short description: | p2@Cdc42bpb |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Cdc42bpb_5end |
| Coexpression cluster: | MCL_coexpression_mm9:24 |
| Association with transcript: | 215bp_to_ENSMUST00000041965, NM_183016, uc007pct.2_5end |
| EntrezGene: | Cdc42bpb |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestine | 1.75e-12 | 31 |
| gastrointestinal system | 2.26e-10 | 47 |
| adult organism | 7.61e-10 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
