FFCP PHASE1:Mm9::chr2:164595421..164595454,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=68612|HGNC=|MCL_coexpression_id=49|UniProt=A2A4Z0,Q9D1C1|association_with_transcript=0bp_to_NM_026785,uc008nvy.1,uc012cjd.1_5end|description=CAGE_peak_1_at_Ube2c_5end|id=chr2:164595421..164595454,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=32.3500671151684,25.4752047576734,9.55498402718026,9.67885476181856,24.543890767371,118.354886697882,154.184342793047,3.61545305636414,1.83025338797167,1.17032263160997,0.171217968225505,0.398860794976682,0.342401459862411,0.437102012094987,652.895133158699,1128.19218989611,1386.53164244999,39.9059639178171,29.8909465260511,101.004737127931,35.8032251536004,284.567866141737,182.056253029838,108.314870231136,103.004767199159,39.0477735598214,81.4140172740651,110.536742367861,135.106651233482,144.16123422268,182.040749248005,356.252207810853,321.063819119146,237.722521523158,369.44122166188,424.230814954872,345.250381439666,287.949761946993,434.422451555233,225.115209908733,252.351308365305,338.790560539389,207.312920744303,48.4702749205973,36.6984491014643,32.854868636941,210.463271629623,185.53940807976,64.8074239066692,28.9700549620682,144.465987117374,172.503077237966,7.21465206048266,13.7818806982155,9.41062637598899,114.480449035996,84.813898221872,12.3761302146586,49.7698493714611,39.6743234454025,34.2268957893337,150.446972238695,216.987930251118,22.497492932035,18.7884608887725,20.6039233334369,126.730846749285,99.1283227729611,153.460626216547,142.836282754929,168.049644119754,35.1350710816678,34.2346238475001,226.48548774845,204.534235152916,159.024850083534,0,0.510749352340751,0.153606533256243,37.3238194276449,19.3953804437108,34.9011958273029,0.837548997004143,0.56276261003168,1.37518422999129,41.5426305517871,29.043822883017,33.3655008027288,10.2230360999798,233.516120729967,3.47837386442013,2.58127163094416,2.03991400112325,0.539703191637817,0.649776417447669,0,74.716431510092,235.534705802876,252.252210469386,214.123782153266,46.0557982669745,60.3134443847294,17.8363667794652,49.7746692207332,478.445200634783,436.539048213595,436.267596047758,58.2337786567206,67.3238497482646,5.93768556259299,294.0576288686,254.53313986895,197.637481148442,120.728835082651,85.4869900876574,36.5689780769356,9.39340877390621,12.1463459812726,425.49767548789,159.82564774804,304.982136993803,422.326345480778,160.296914647585,0,1.67557365450764,137.946809812639,203.685711660064,175.171597450075,149.815797719143,0.898743836428936,3.20250421973039,38.952849154988,0.521472960576829,3.06858548796397,0.20778804455956,5.353961681236,134.020602827016,314.625228672925,4.54900965180614,4.20883711772948,374.096273517773,245.765349639383,243.263937367027,192.600757194044,163.219561464036,173.465977265687,145.425076516699,8.79591460512653,512.189551208433,364.21831040322,280.466091917334,263.03487891309,226.330460869637,133.032327611468,141.166545575849,227.894235507175,162.211246269357,192.753582428922,270.807814924,403.481004899158,533.546786456994,481.305890285293,392.522771600279,439.964822187195,419.760814166556,322.524581368816,316.562613651551,243.338973493181,119.964130586927,88.6504306027114,53.1811390620814,26.6083977114105,61.2544821662031,56.0982830418354,0.630869845692382,41.7792726259895,12.5559137533843,220.816223164059,419.32470055227,358.805658024378,313.663400857975,249.482519959075,222.155665801025,246.722637067989,129.071904740107,156.134609078362,117.373542509726,125.541533857966,84.0295215483408,142.912285976021,144.59635536617,96.3843762551137,460.703331415035,366.62347696462,339.250284375972,269.838009395041,231.19136470381,120.282931111896,81.3854232789191,17.2703873136135,31.399745568275,25.1730214400473,3.26097889795864,707.756938447671,826.334015455905,923.058971339825,1195.45469534245,1091.56782503944,1176.37143523016,682.127541895872,356.535363678303,387.955276834759,99.2000625038746,180.116218671556,87.0585107989624,52.2838277350521,85.9313610769959,26.0519501536218,26.7892125741577,330.852004951266,367.974916806094,445.411105074094,458.584745155733,255.614548856211,141.159879045406,65.3697720323626,146.91595430697,116.047497375958,58.2009905599828,48.6674044705742,62.1665934717224,74.3496161108969,12.0633027151418,52.2149456465961,192.279830750443,56.0151594998607,0.321101179975584,2.10981035865966,270.492659871514,30.5489821917291,368.829108497604,386.143918109375,363.203848577499,265.97227212119,165.762213517301,134.461352124695,364.73444220908,225.621522307533,227.685760097198,1.28528526568723,59.4728957022646,196.406360844983,125.585845661607,43.7170825877219,2.65490276679926,470.751653504509,403.299624990978,321.005845744539,210.845551516872,102.990774561216,93.0341855405596,178.858594902933,188.587113165518,82.1695570633122,43.2216295157495,68.0694585438033,4.08527526904546,280.35512340675,327.536187337934,182.186479776853,116.689873736616,91.5032034298622,100.04580452609,90.426089887036,106.540955460924,18.85305430688,5.07215315526412,49.9605346412685,99.6235512713737,147.525414374269,147.30547249987,114.406207122308,104.058658676857,2.78137953015765,726.884726914065,297.403476735004,526.322846784721,1181.07022541941,944.147030869121,935.473950241471,114.395483385865,124.556792568056,130.59897524518,111.696462307768,369.164104509185,271.431488614343,263.425026264373,207.833766238382,199.801745827753,161.97208000817,104.887235315451,57.8480631784705,91.1193262241304,9.32008969630389,57.4966797457874,273.316246168393,284.754062076665,219.53539164043,228.742047379062,274.215791671533,182.842577810085,194.13473780233,78.8542270081346,38.895043452987,29.3790606383023,384.901544925121,360.039982355332,407.762499944364,446.537868574681,434.497790384977,400.144248529468,340.393513040552,419.881325757323,359.238628915509,439.713274399349,421.55428005713,358.35262748007,299.892310392907,223.819267677705,27.2076460338254,267.493073815748,478.085141871896,240.746539866089,5.9888774149979,54.8032828317451,36.0808699806512,56.1645153187153,7.02200945649509,3.3885110557024,3.68260189205742,5.15605962095457,3.26521046453006,1.37016503954128,2.2661816921691,0.675022500231806,0.900642406448441,1.35942722695261,0.51776031175182,553.601712013998,260.962267204274,294.85693713739,353.963380051436,472.258455400844,254.80710271172,197.132847560033,194.703129090755,187.095899192028,197.356522387526,195.686019515265,185.231067241127,188.313071521934,183.944262859189,177.475599072845,144.793282150054,142.074183608393,159.535925323484,131.867488257058,109.957593340395,199.549904888312,172.506483586876,156.891012985337,185.462027622851,146.245977165424,177.690676572521,168.293735042951,157.31568743983,168.532905282714,136.35757201283,165.851755337595,160.857819719295,95.7600641017073,175.388504222513,194.256957258009,132.149795729173,169.13255290603,122.906242915627,69.0550878768525,154.413993383661,137.26575868729|short_description=p1@Ube2c}} | ||
|EntrezGene=68612 | |||
|HGNC= | |||
|MCL_coexpression_id=49 | |||
|UniProt=A2A4Z0,Q9D1C1 | |||
|association_with_transcript=0bp_to_NM_026785,uc008nvy.1,uc012cjd.1_5end | |||
|description=CAGE_peak_1_at_Ube2c_5end | |||
|id=chr2:164595421..164595454,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=32.3500671151684,25.4752047576734,9.55498402718026,9.67885476181856,24.543890767371,118.354886697882,154.184342793047,3.61545305636414,1.83025338797167,1.17032263160997,0.171217968225505,0.398860794976682,0.342401459862411,0.437102012094987,652.895133158699,1128.19218989611,1386.53164244999,39.9059639178171,29.8909465260511,101.004737127931,35.8032251536004,284.567866141737,182.056253029838,108.314870231136,103.004767199159,39.0477735598214,81.4140172740651,110.536742367861,135.106651233482,144.16123422268,182.040749248005,356.252207810853,321.063819119146,237.722521523158,369.44122166188,424.230814954872,345.250381439666,287.949761946993,434.422451555233,225.115209908733,252.351308365305,338.790560539389,207.312920744303,48.4702749205973,36.6984491014643,32.854868636941,210.463271629623,185.53940807976,64.8074239066692,28.9700549620682,144.465987117374,172.503077237966,7.21465206048266,13.7818806982155,9.41062637598899,114.480449035996,84.813898221872,12.3761302146586,49.7698493714611,39.6743234454025,34.2268957893337,150.446972238695,216.987930251118,22.497492932035,18.7884608887725,20.6039233334369,126.730846749285,99.1283227729611,153.460626216547,142.836282754929,168.049644119754,35.1350710816678,34.2346238475001,226.48548774845,204.534235152916,159.024850083534,0,0.510749352340751,0.153606533256243,37.3238194276449,19.3953804437108,34.9011958273029,0.837548997004143,0.56276261003168,1.37518422999129,41.5426305517871,29.043822883017,33.3655008027288,10.2230360999798,233.516120729967,3.47837386442013,2.58127163094416,2.03991400112325,0.539703191637817,0.649776417447669,0,74.716431510092,235.534705802876,252.252210469386,214.123782153266,46.0557982669745,60.3134443847294,17.8363667794652,49.7746692207332,478.445200634783,436.539048213595,436.267596047758,58.2337786567206,67.3238497482646,5.93768556259299,294.0576288686,254.53313986895,197.637481148442,120.728835082651,85.4869900876574,36.5689780769356,9.39340877390621,12.1463459812726,425.49767548789,159.82564774804,304.982136993803,422.326345480778,160.296914647585,0,1.67557365450764,137.946809812639,203.685711660064,175.171597450075,149.815797719143,0.898743836428936,3.20250421973039,38.952849154988,0.521472960576829,3.06858548796397,0.20778804455956,5.353961681236,134.020602827016,314.625228672925,4.54900965180614,4.20883711772948,374.096273517773,245.765349639383,243.263937367027,192.600757194044,163.219561464036,173.465977265687,145.425076516699,8.79591460512653,512.189551208433,364.21831040322,280.466091917334,263.03487891309,226.330460869637,133.032327611468,141.166545575849,227.894235507175,162.211246269357,192.753582428922,270.807814924,403.481004899158,533.546786456994,481.305890285293,392.522771600279,439.964822187195,419.760814166556,322.524581368816,316.562613651551,243.338973493181,119.964130586927,88.6504306027114,53.1811390620814,26.6083977114105,61.2544821662031,56.0982830418354,0.630869845692382,41.7792726259895,12.5559137533843,220.816223164059,419.32470055227,358.805658024378,313.663400857975,249.482519959075,222.155665801025,246.722637067989,129.071904740107,156.134609078362,117.373542509726,125.541533857966,84.0295215483408,142.912285976021,144.59635536617,96.3843762551137,460.703331415035,366.62347696462,339.250284375972,269.838009395041,231.19136470381,120.282931111896,81.3854232789191,17.2703873136135,31.399745568275,25.1730214400473,3.26097889795864,707.756938447671,826.334015455905,923.058971339825,1195.45469534245,1091.56782503944,1176.37143523016,682.127541895872,356.535363678303,387.955276834759,99.2000625038746,180.116218671556,87.0585107989624,52.2838277350521,85.9313610769959,26.0519501536218,26.7892125741577,330.852004951266,367.974916806094,445.411105074094,458.584745155733,255.614548856211,141.159879045406,65.3697720323626,146.91595430697,116.047497375958,58.2009905599828,48.6674044705742,62.1665934717224,74.3496161108969,12.0633027151418,52.2149456465961,192.279830750443,56.0151594998607,0.321101179975584,2.10981035865966,270.492659871514,30.5489821917291,368.829108497604,386.143918109375,363.203848577499,265.97227212119,165.762213517301,134.461352124695,364.73444220908,225.621522307533,227.685760097198,1.28528526568723,59.4728957022646,196.406360844983,125.585845661607,43.7170825877219,2.65490276679926,470.751653504509,403.299624990978,321.005845744539,210.845551516872,102.990774561216,93.0341855405596,178.858594902933,188.587113165518,82.1695570633122,43.2216295157495,68.0694585438033,4.08527526904546,280.35512340675,327.536187337934,182.186479776853,116.689873736616,91.5032034298622,100.04580452609,90.426089887036,106.540955460924,18.85305430688,5.07215315526412,49.9605346412685,99.6235512713737,147.525414374269,147.30547249987,114.406207122308,104.058658676857,2.78137953015765,726.884726914065,297.403476735004,526.322846784721,1181.07022541941,944.147030869121,935.473950241471,114.395483385865,124.556792568056,130.59897524518,111.696462307768,369.164104509185,271.431488614343,263.425026264373,207.833766238382,199.801745827753,161.97208000817,104.887235315451,57.8480631784705,91.1193262241304,9.32008969630389,57.4966797457874,273.316246168393,284.754062076665,219.53539164043,228.742047379062,274.215791671533,182.842577810085,194.13473780233,78.8542270081346,38.895043452987,29.3790606383023,384.901544925121,360.039982355332,407.762499944364,446.537868574681,434.497790384977,400.144248529468,340.393513040552,419.881325757323,359.238628915509,439.713274399349,421.55428005713,358.35262748007,299.892310392907,223.819267677705,27.2076460338254,267.493073815748,478.085141871896,240.746539866089,5.9888774149979,54.8032828317451,36.0808699806512,56.1645153187153,7.02200945649509,3.3885110557024,3.68260189205742,5.15605962095457,3.26521046453006,1.37016503954128,2.2661816921691,0.675022500231806,0.900642406448441,1.35942722695261,0.51776031175182,553.601712013998,260.962267204274,294.85693713739,353.963380051436,472.258455400844,254.80710271172,197.132847560033,194.703129090755,187.095899192028,197.356522387526,195.686019515265,185.231067241127,188.313071521934,183.944262859189,177.475599072845,144.793282150054,142.074183608393,159.535925323484,131.867488257058,109.957593340395,199.549904888312,172.506483586876,156.891012985337,185.462027622851,146.245977165424,177.690676572521,168.293735042951,157.31568743983,168.532905282714,136.35757201283,165.851755337595,160.857819719295,95.7600641017073,175.388504222513,194.256957258009,132.149795729173,169.13255290603,122.906242915627,69.0550878768525,154.413993383661,137.26575868729 | |||
|short_description=p1@Ube2c | |||
}} | |||
Revision as of 22:54, 13 September 2013
| Short description: | p1@Ube2c |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Ube2c_5end |
| Coexpression cluster: | MCL_coexpression_mm9:49 |
| Association with transcript: | 0bp_to_NM_026785, uc008nvy.1, uc012cjd.1_5end |
| EntrezGene: | Ube2c |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
