FFCP PHASE1:Mm9::chr6:92777666..92777679,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=209|UniProt=|association_with_transcript=40bp_to_ENSMUST00000133858_5end|description=CAGE_peak_3_at_ENSMUST00000133858_5end|id=chr6:92777666..92777679,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002605,4.00e-13,2;CL:0002604,4.00e-13,2;CL:0002494,4.24e-09,3;CL:0000737,4.24e-09,3;CL:0000746,4.24e-09,3;CL:0000513,4.24e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!1.35e-10!18;UBERON:0005564!1.35e-10!18;UBERON:0005156!2.41e-10!26;UBERON:0000990!2.41e-10!26;UBERON:0003133!4.76e-10!24;UBERON:0000473!1.58e-09!14;UBERON:0004176!2.31e-09!17;UBERON:0009196!2.31e-09!17;UBERON:0009117!2.31e-09!17;UBERON:0003135!9.58e-09!15;UBERON:0003101!4.62e-08!16;UBERON:0000079!4.62e-08!16;UBERON:0002342!9.38e-07!10;UBERON:0005062!9.38e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0004176,1.27e-23,17;UBERON:0009196,1.27e-23,17;UBERON:0009117,1.27e-23,17;UBERON:0000991,2.84e-22,18;UBERON:0005564,2.84e-22,18;UBERON:0000473,4.03e-22,14;UBERON:0003135,1.29e-20,15;UBERON:0003101,2.68e-19,16;UBERON:0000079,2.68e-19,16;UBERON:0003133,1.56e-16,24;UBERON:0005156,3.31e-15,26;UBERON:0000990,3.31e-15,26;UBERON:0002323,1.85e-10,37;UBERON:0004458,1.85e-10,37;UBERON:0003886,3.66e-10,38;UBERON:0002553,7.00e-10,39|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.872100625521786,1.31811709640683,1.36100929351998,0.419959264876088,0,0,0,0,1.80081605225163,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0,0.904335843315735,0.705532242814229,0.376999773989026,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,2.11073453982987,1.2604344302271,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.350679099451593,0.69560190836683,0.442830443938806,0.627994911365499,0.740382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0,0,2.2710413633323,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,1.49516546043979,0.66183396182839,1.94451188344048,2.71235629303235,7.60302564708502,7.04143431874524,5.4685841634459,1.36317147753424,0.483168241652012,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0.290692833264657,0,0,0,0,0,0,0.237270036248348,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p3@ENSMUST00000133858}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=209 | |||
|UniProt= | |||
|association_with_transcript=40bp_to_ENSMUST00000133858_5end | |||
|description=CAGE_peak_3_at_ENSMUST00000133858_5end | |||
|id=chr6:92777666..92777679,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.00e-13,2;CL:0002604,4.00e-13,2;CL:0002494,4.24e-09,3;CL:0000737,4.24e-09,3;CL:0000746,4.24e-09,3;CL:0000513,4.24e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.35e-10!18;UBERON:0005564!1.35e-10!18;UBERON:0005156!2.41e-10!26;UBERON:0000990!2.41e-10!26;UBERON:0003133!4.76e-10!24;UBERON:0000473!1.58e-09!14;UBERON:0004176!2.31e-09!17;UBERON:0009196!2.31e-09!17;UBERON:0009117!2.31e-09!17;UBERON:0003135!9.58e-09!15;UBERON:0003101!4.62e-08!16;UBERON:0000079!4.62e-08!16;UBERON:0002342!9.38e-07!10;UBERON:0005062!9.38e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,1.27e-23,17;UBERON:0009196,1.27e-23,17;UBERON:0009117,1.27e-23,17;UBERON:0000991,2.84e-22,18;UBERON:0005564,2.84e-22,18;UBERON:0000473,4.03e-22,14;UBERON:0003135,1.29e-20,15;UBERON:0003101,2.68e-19,16;UBERON:0000079,2.68e-19,16;UBERON:0003133,1.56e-16,24;UBERON:0005156,3.31e-15,26;UBERON:0000990,3.31e-15,26;UBERON:0002323,1.85e-10,37;UBERON:0004458,1.85e-10,37;UBERON:0003886,3.66e-10,38;UBERON:0002553,7.00e-10,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.872100625521786,1.31811709640683,1.36100929351998,0.419959264876088,0,0,0,0,1.80081605225163,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0,0.904335843315735,0.705532242814229,0.376999773989026,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,2.11073453982987,1.2604344302271,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.350679099451593,0.69560190836683,0.442830443938806,0.627994911365499,0.740382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0,0,2.2710413633323,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,1.49516546043979,0.66183396182839,1.94451188344048,2.71235629303235,7.60302564708502,7.04143431874524,5.4685841634459,1.36317147753424,0.483168241652012,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0.290692833264657,0,0,0,0,0,0,0.237270036248348,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p3@ENSMUST00000133858 | |||
}} |
Revision as of 11:00, 14 September 2013
Short description: | p3@ENSMUST00000133858 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENSMUST00000133858_5end |
Coexpression cluster: | MCL_coexpression_mm9:209 |
Association with transcript: | 40bp_to_ENSMUST00000133858_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.00e-13 | 2 |
astrocyte of the hippocampus | 4.00e-13 | 2 |
cardiocyte | 4.24e-09 | 3 |
striated muscle cell | 4.24e-09 | 3 |
cardiac muscle cell | 4.24e-09 | 3 |
cardiac muscle myoblast | 4.24e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
external genitalia | 1.27e-23 | 17 |
indifferent external genitalia | 1.27e-23 | 17 |
indifferent gonad | 1.27e-23 | 17 |
gonad | 2.84e-22 | 18 |
gonad primordium | 2.84e-22 | 18 |
testis | 4.03e-22 | 14 |
male reproductive organ | 1.29e-20 | 15 |
male organism | 2.68e-19 | 16 |
male reproductive system | 2.68e-19 | 16 |
reproductive organ | 1.56e-16 | 24 |
reproductive structure | 3.31e-15 | 26 |
reproductive system | 3.31e-15 | 26 |
body cavity | 1.85e-10 | 37 |
body cavity or lining | 1.85e-10 | 37 |
body cavity precursor | 3.66e-10 | 38 |
anatomical cavity | 7.00e-10 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.