FFCP PHASE1:Mm9::chr12:86771033..86771037,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:86771033..86771037,-|id=chr12:86771033..86771037,-|ontology_enrichment_celltype=CL:0002563!2.47e-42!9;CL:0002251!2.47e-42!9;CL:0000239!5.79e-28!6;CL:0000677!5.79e-28!6;CL:0000212!5.79e-28!6;CL:0000584!5.79e-28!6;CL:0000066!6.44e-26!25;CL:0002076!5.97e-25!15;CL:0000075!6.35e-24!7;CL:0000223!2.04e-18!20;CL:0002250!7.07e-16!3;CL:0000473!7.91e-15!3;CL:0000627!7.91e-15!3;CL:0000682!7.91e-15!3;CL:0000063!1.18e-08!66|ontology_enrichment_celltype_v019_2=CL:0002563,5.24e-58,9;CL:0002251,5.24e-58,9;CL:0002250,1.18e-44,3;CL:0002076,4.27e-35,15;CL:0000223,1.76e-26,20;CL:0000239,3.68e-22,6;CL:0000677,3.68e-22,6;CL:0000584,3.68e-22,6;CL:0000066,2.66e-21,25;CL:0000075,4.01e-19,7;CL:0002321,7.20e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!2.47e-42!9;UBERON:0004808!2.47e-42!9;UBERON:0001277!2.47e-42!9;UBERON:0000344!6.49e-37!15;UBERON:0001242!1.81e-35!13;UBERON:0000060!1.81e-35!13;UBERON:0001262!1.81e-35!13;UBERON:0004786!1.81e-35!13;UBERON:0000485!1.94e-34!11;UBERON:0004923!1.75e-22!24;UBERON:0000160!9.63e-17!43;UBERON:0005409!1.20e-11!59|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.24e-58,9;UBERON:0004808,5.24e-58,9;UBERON:0001277,5.24e-58,9;UBERON:0000485,1.34e-47,11;UBERON:0001242,2.18e-40,13;UBERON:0001262,2.18e-40,13;UBERON:0004786,2.18e-40,13;UBERON:0000344,4.27e-35,15;UBERON:0004923,3.63e-22,24;UBERON:0000160,2.78e-17,31;UBERON:0005409,1.50e-11,47;UBERON:0003929,6.31e-10,55;UBERON:0000490,2.50e-08,66;UBERON:0005911,5.59e-08,69|phase1_expression=0,0.348975407639361,0.454999239389536,2.11724947914781,1.00179145989269,1.17515490338323,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0,0.57423196411502,0.86152399231815,0.646413698057667,0,0,0,0,0,0,6.06588401477677,2.65975432573588,7.55426618170766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:86771033..86771037,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:86771033..86771037,- | |||
|id=chr12:86771033..86771037,- | |||
|ontology_enrichment_celltype=CL:0002563!2.47e-42!9;CL:0002251!2.47e-42!9;CL:0000239!5.79e-28!6;CL:0000677!5.79e-28!6;CL:0000212!5.79e-28!6;CL:0000584!5.79e-28!6;CL:0000066!6.44e-26!25;CL:0002076!5.97e-25!15;CL:0000075!6.35e-24!7;CL:0000223!2.04e-18!20;CL:0002250!7.07e-16!3;CL:0000473!7.91e-15!3;CL:0000627!7.91e-15!3;CL:0000682!7.91e-15!3;CL:0000063!1.18e-08!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.24e-58,9;CL:0002251,5.24e-58,9;CL:0002250,1.18e-44,3;CL:0002076,4.27e-35,15;CL:0000223,1.76e-26,20;CL:0000239,3.68e-22,6;CL:0000677,3.68e-22,6;CL:0000584,3.68e-22,6;CL:0000066,2.66e-21,25;CL:0000075,4.01e-19,7;CL:0002321,7.20e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!2.47e-42!9;UBERON:0004808!2.47e-42!9;UBERON:0001277!2.47e-42!9;UBERON:0000344!6.49e-37!15;UBERON:0001242!1.81e-35!13;UBERON:0000060!1.81e-35!13;UBERON:0001262!1.81e-35!13;UBERON:0004786!1.81e-35!13;UBERON:0000485!1.94e-34!11;UBERON:0004923!1.75e-22!24;UBERON:0000160!9.63e-17!43;UBERON:0005409!1.20e-11!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.24e-58,9;UBERON:0004808,5.24e-58,9;UBERON:0001277,5.24e-58,9;UBERON:0000485,1.34e-47,11;UBERON:0001242,2.18e-40,13;UBERON:0001262,2.18e-40,13;UBERON:0004786,2.18e-40,13;UBERON:0000344,4.27e-35,15;UBERON:0004923,3.63e-22,24;UBERON:0000160,2.78e-17,31;UBERON:0005409,1.50e-11,47;UBERON:0003929,6.31e-10,55;UBERON:0000490,2.50e-08,66;UBERON:0005911,5.59e-08,69 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,2.11724947914781,1.00179145989269,1.17515490338323,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0,0.57423196411502,0.86152399231815,0.646413698057667,0,0,0,0,0,0,6.06588401477677,2.65975432573588,7.55426618170766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:86771033..86771037,- | |||
}} |
Revision as of 23:30, 12 September 2013
Short description: | p@chr12:86771033..86771037, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:86771033..86771037, - |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.24e-58 | 9 |
epithelial cell of alimentary canal | 5.24e-58 | 9 |
intestinal crypt stem cell | 1.18e-44 | 3 |
endo-epithelial cell | 4.27e-35 | 15 |
endodermal cell | 1.76e-26 | 20 |
brush border epithelial cell | 3.68e-22 | 6 |
gut absorptive cell | 3.68e-22 | 6 |
enterocyte | 3.68e-22 | 6 |
epithelial cell | 2.66e-21 | 25 |
columnar/cuboidal epithelial cell | 4.01e-19 | 7 |
embryonic cell | 7.20e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.24e-58 | 9 |
gastrointestinal system epithelium | 5.24e-58 | 9 |
intestinal epithelium | 5.24e-58 | 9 |
simple columnar epithelium | 1.34e-47 | 11 |
intestinal mucosa | 2.18e-40 | 13 |
wall of intestine | 2.18e-40 | 13 |
gastrointestinal system mucosa | 2.18e-40 | 13 |
mucosa | 4.27e-35 | 15 |
organ component layer | 3.63e-22 | 24 |
intestine | 2.78e-17 | 31 |
gastrointestinal system | 1.50e-11 | 47 |
gut epithelium | 6.31e-10 | 55 |
unilaminar epithelium | 2.50e-08 | 66 |
endo-epithelium | 5.59e-08 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.