FFCP PHASE1:Mm9::chr19:46380069..46380117,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=452|UniProt=|association_with_transcript=0bp_to_uc008hss.1_5end|description=CAGE_peak_1_at_uc008hss.1_5end|id=chr19:46380069..46380117,-|ontology_enrichment_celltype=CL:0000063!1.06e-12!66;CL:0000988!3.30e-09!32;CL:0002032!3.30e-09!32;CL:0000037!3.30e-09!32;CL:0000566!3.30e-09!32;CL:0000837!3.30e-09!32;CL:0002320!4.14e-08!46;CL:0000134!4.14e-08!46;CL:0000838!1.12e-07!12;CL:0000738!4.47e-07!17;CL:0002087!4.47e-07!17;CL:0002031!4.54e-07!25;CL:0000084!4.58e-07!11;CL:0000827!4.58e-07!11;CL:0000219!6.94e-07!54;CL:0000542!7.14e-07!13;CL:0000051!7.14e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,2.30e-09,32;CL:0002032,2.30e-09,32;CL:0000037,2.30e-09,32;CL:0000837,2.30e-09,32;CL:0002320,2.99e-08,46;CL:0000134,2.99e-08,46;CL:0000838,1.10e-07,12;CL:0002031,3.23e-07,25;CL:0000738,4.38e-07,17;CL:0002087,4.38e-07,17;CL:0000084,4.49e-07,11;CL:0000827,4.49e-07,11;CL:0000219,5.96e-07,54;CL:0000542,7.00e-07,13;CL:0000051,7.00e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.45e-13!48;UBERON:0002390!2.55e-12!45;UBERON:0003061!2.55e-12!45;UBERON:0001007!8.40e-10!128;UBERON:0001555!8.40e-10!128;UBERON:0007026!8.40e-10!128;UBERON:0004921!5.12e-09!126;UBERON:0004185!5.12e-09!126;UBERON:0004119!5.19e-09!130;UBERON:0000925!5.19e-09!130;UBERON:0006595!5.19e-09!130;UBERON:0002384!4.14e-08!46;UBERON:0003408!6.15e-08!24;UBERON:0000072!1.32e-07!27;UBERON:0006562!1.51e-07!24;UBERON:0001557!1.51e-07!24;UBERON:0001042!1.51e-07!24;UBERON:0008814!1.51e-07!24;UBERON:0009145!1.51e-07!24;UBERON:0002405!1.58e-07!70;UBERON:0004177!1.85e-07!29;UBERON:0002370!2.13e-07!23;UBERON:0000974!2.13e-07!23;UBERON:0004807!2.13e-07!23;UBERON:0005058!2.13e-07!23;UBERON:0003351!2.13e-07!23;UBERON:0009113!2.13e-07!23;UBERON:0003295!2.13e-07!23;UBERON:0009722!2.13e-07!23;UBERON:0005562!2.13e-07!23;UBERON:0007690!2.13e-07!23;UBERON:0000344!4.45e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.41e-13,48;UBERON:0002405,4.41e-13,48;UBERON:0002390,2.07e-12,45;UBERON:0003061,2.07e-12,45;UBERON:0001007,1.56e-10,116;UBERON:0001555,1.56e-10,116;UBERON:0007026,1.56e-10,116;UBERON:0004921,1.04e-09,114;UBERON:0004119,1.23e-09,118;UBERON:0000925,1.23e-09,118;UBERON:0006595,1.23e-09,118;UBERON:0002384,2.99e-08,46;UBERON:0003408,5.04e-08,24;UBERON:0000160,1.05e-07,31;UBERON:0000072,1.10e-07,27;UBERON:0006562,1.25e-07,24;UBERON:0001557,1.25e-07,24;UBERON:0001042,1.25e-07,24;UBERON:0008814,1.25e-07,24;UBERON:0009145,1.25e-07,24;UBERON:0004177,1.55e-07,29;UBERON:0005057,1.55e-07,29;UBERON:0002370,1.76e-07,23;UBERON:0000974,1.76e-07,23;UBERON:0004807,1.76e-07,23;UBERON:0005058,1.76e-07,23;UBERON:0003351,1.76e-07,23;UBERON:0009113,1.76e-07,23;UBERON:0003295,1.76e-07,23;UBERON:0009722,1.76e-07,23;UBERON:0005562,1.76e-07,23;UBERON:0007690,1.76e-07,23;UBERON:0005409,2.66e-07,47;UBERON:0000344,4.36e-07,15;UBERON:0000077,8.18e-07,35|phase1_expression=3.04282809499109,12.9120900826564,20.9299650119187,4.83942738090928,10.0179145989269,13.4303417529512,13.0823078733494,24.5334314538995,16.3314917695933,14.5120006319636,9.41698825240277,6.78063351460359,16.7776715332582,20.3689537636264,3.66420737997229,5.66930748691513,2.79824751251259,14.3535285237998,15.0825876966313,20.3707032863054,4.25216450755349,10.3262589248921,9.92559198727954,12.7993938234725,14.9116032693661,18.9496548157957,13.3536218809313,17.8841123129288,5.13063232532209,4.53654233567875,13.9690221712842,3.81018404075779,0,0,6.35473563452804,5.48574329683025,5.9209113316087,16.7412652294763,18.7520482685712,17.2762835511353,25.2939539853336,23.9065919735456,18.934903768215,3.9028013572429,3.75094645512204,6.42413632565885,5.47673941043627,2.61630187656536,3.51497892375155,3.11087838518853,1.67983705950435,4.31257693094915,16.9460432118314,8.70434570413613,10.4189077734164,3.08711323243136,1.43266719969378,0.515672092277442,0.404632921719196,0,2.53532561402472,2.03306719241479,3.55717918444456,17.0980946283466,9.88866362566974,10.6572017241915,6.2916023208865,5.76327457982332,1.65903379693564,2.02508907497536,1.47227472945967,1.71390590642282,1.98781686856452,1.22490799214954,0.575072826109418,3.67687514644008,2.20231761998777,0.383062014255563,0.153606533256243,0.395658863190582,0.365950574409639,0,1.3959149950069,0.56276261003168,0.916789486660861,0.294628585473668,0.569486723196412,0.186399445825301,0.832988126665025,1.51143120213571,17.102004833399,2.58127163094416,0.679971333707751,1.07940638327563,1.94932925234301,0,2.66844398250329,5.79463096765396,3.63700406444016,4.59341446863442,6.19711047017394,5.13305909657271,2.54805239706646,0,3.030874574157,3.54703811665138,5.56076889516262,3.08296475241462,2.33044095282455,5.34391700633369,2.08182392119363,3.34912026143355,2.07553947530453,2.41156224884196,3.88042733547826,4.02133092254962,4.44950941921873,4.48258006451726,7.07688441559899,2.10296904931632,2.20841518460394,1.93950101254089,13.0474232852686,0.585561594023094,0.41889341362691,5.875512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| ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=452 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc008hss.1_5end | |||
|description=CAGE_peak_1_at_uc008hss.1_5end | |||
|id=chr19:46380069..46380117,- | |||
|ontology_enrichment_celltype=CL:0000063!1.06e-12!66;CL:0000988!3.30e-09!32;CL:0002032!3.30e-09!32;CL:0000037!3.30e-09!32;CL:0000566!3.30e-09!32;CL:0000837!3.30e-09!32;CL:0002320!4.14e-08!46;CL:0000134!4.14e-08!46;CL:0000838!1.12e-07!12;CL:0000738!4.47e-07!17;CL:0002087!4.47e-07!17;CL:0002031!4.54e-07!25;CL:0000084!4.58e-07!11;CL:0000827!4.58e-07!11;CL:0000219!6.94e-07!54;CL:0000542!7.14e-07!13;CL:0000051!7.14e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.30e-09,32;CL:0002032,2.30e-09,32;CL:0000037,2.30e-09,32;CL:0000837,2.30e-09,32;CL:0002320,2.99e-08,46;CL:0000134,2.99e-08,46;CL:0000838,1.10e-07,12;CL:0002031,3.23e-07,25;CL:0000738,4.38e-07,17;CL:0002087,4.38e-07,17;CL:0000084,4.49e-07,11;CL:0000827,4.49e-07,11;CL:0000219,5.96e-07,54;CL:0000542,7.00e-07,13;CL:0000051,7.00e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.45e-13!48;UBERON:0002390!2.55e-12!45;UBERON:0003061!2.55e-12!45;UBERON:0001007!8.40e-10!128;UBERON:0001555!8.40e-10!128;UBERON:0007026!8.40e-10!128;UBERON:0004921!5.12e-09!126;UBERON:0004185!5.12e-09!126;UBERON:0004119!5.19e-09!130;UBERON:0000925!5.19e-09!130;UBERON:0006595!5.19e-09!130;UBERON:0002384!4.14e-08!46;UBERON:0003408!6.15e-08!24;UBERON:0000072!1.32e-07!27;UBERON:0006562!1.51e-07!24;UBERON:0001557!1.51e-07!24;UBERON:0001042!1.51e-07!24;UBERON:0008814!1.51e-07!24;UBERON:0009145!1.51e-07!24;UBERON:0002405!1.58e-07!70;UBERON:0004177!1.85e-07!29;UBERON:0002370!2.13e-07!23;UBERON:0000974!2.13e-07!23;UBERON:0004807!2.13e-07!23;UBERON:0005058!2.13e-07!23;UBERON:0003351!2.13e-07!23;UBERON:0009113!2.13e-07!23;UBERON:0003295!2.13e-07!23;UBERON:0009722!2.13e-07!23;UBERON:0005562!2.13e-07!23;UBERON:0007690!2.13e-07!23;UBERON:0000344!4.45e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.41e-13,48;UBERON:0002405,4.41e-13,48;UBERON:0002390,2.07e-12,45;UBERON:0003061,2.07e-12,45;UBERON:0001007,1.56e-10,116;UBERON:0001555,1.56e-10,116;UBERON:0007026,1.56e-10,116;UBERON:0004921,1.04e-09,114;UBERON:0004119,1.23e-09,118;UBERON:0000925,1.23e-09,118;UBERON:0006595,1.23e-09,118;UBERON:0002384,2.99e-08,46;UBERON:0003408,5.04e-08,24;UBERON:0000160,1.05e-07,31;UBERON:0000072,1.10e-07,27;UBERON:0006562,1.25e-07,24;UBERON:0001557,1.25e-07,24;UBERON:0001042,1.25e-07,24;UBERON:0008814,1.25e-07,24;UBERON:0009145,1.25e-07,24;UBERON:0004177,1.55e-07,29;UBERON:0005057,1.55e-07,29;UBERON:0002370,1.76e-07,23;UBERON:0000974,1.76e-07,23;UBERON:0004807,1.76e-07,23;UBERON:0005058,1.76e-07,23;UBERON:0003351,1.76e-07,23;UBERON:0009113,1.76e-07,23;UBERON:0003295,1.76e-07,23;UBERON:0009722,1.76e-07,23;UBERON:0005562,1.76e-07,23;UBERON:0007690,1.76e-07,23;UBERON:0005409,2.66e-07,47;UBERON:0000344,4.36e-07,15;UBERON:0000077,8.18e-07,35 | |||
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| |||
|short_description=p1@uc008hss.1 | |||
}} |
Revision as of 17:50, 13 September 2013
Short description: | p1@uc008hss.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc008hss.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:452 |
Association with transcript: | 0bp_to_uc008hss.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.30e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.30e-09 | 32 |
hematopoietic stem cell | 2.30e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.30e-09 | 32 |
connective tissue cell | 2.99e-08 | 46 |
mesenchymal cell | 2.99e-08 | 46 |
lymphoid lineage restricted progenitor cell | 1.10e-07 | 12 |
hematopoietic lineage restricted progenitor cell | 3.23e-07 | 25 |
leukocyte | 4.38e-07 | 17 |
nongranular leukocyte | 4.38e-07 | 17 |
T cell | 4.49e-07 | 11 |
pro-T cell | 4.49e-07 | 11 |
motile cell | 5.96e-07 | 54 |
lymphocyte | 7.00e-07 | 13 |
common lymphoid progenitor | 7.00e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.