FFCP PHASE1:Mm9::chr12:115947341..115947346,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=63|UniProt=|association_with_transcript=-49bp_to_ENSMUST00000103505_5end|description=CAGE_peak_1_at_ENSMUST00000103505_5end|id=chr12:115947341..115947346,-|ontology_enrichment_celltype=CL:0000553!8.01e-08!6;CL:0000556!8.01e-08!6|ontology_enrichment_celltype_v019_2=CL:0000553,1.59e-14,6;CL:0000556,1.59e-14,6;CL:0000050,1.42e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!8.63e-12!51;UBERON:0007823!3.97e-08!5;UBERON:0002193!1.46e-07!48;UBERON:0003887!3.19e-07!10;UBERON:0002106!4.49e-07!6;UBERON:0004457!4.49e-07!6;UBERON:0000042!4.49e-07!6;UBERON:0004854!4.49e-07!6;UBERON:0009034!4.49e-07!6;UBERON:0002095!4.49e-07!6;UBERON:0004782!4.49e-07!6;UBERON:0003281!4.49e-07!6;UBERON:0009664!4.49e-07!6;UBERON:0002296!4.49e-07!6;UBERON:0005602!4.49e-07!6;UBERON:0001179!4.49e-07!6;UBERON:0006293!4.49e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.89e-11,51;UBERON:0002465,2.34e-10,3;UBERON:0002193,2.81e-09,48;UBERON:0002405,2.81e-09,48;UBERON:0002106,5.57e-09,6;UBERON:0004457,5.57e-09,6;UBERON:0000042,5.57e-09,6;UBERON:0004854,5.57e-09,6;UBERON:0009034,5.57e-09,6;UBERON:0002095,5.57e-09,6;UBERON:0004782,5.57e-09,6;UBERON:0003281,5.57e-09,6;UBERON:0009664,5.57e-09,6;UBERON:0002296,5.57e-09,6;UBERON:0005602,5.57e-09,6;UBERON:0001179,5.57e-09,6;UBERON:0006293,5.57e-09,6;UBERON:0003887,6.42e-08,10;UBERON:0001155,8.59e-08,2;UBERON:0000059,8.59e-08,2;UBERON:0001911,2.27e-07,2;UBERON:0000076,2.27e-07,2;UBERON:0005333,2.27e-07,2;UBERON:0008425,2.27e-07,2;UBERON:0005311,2.27e-07,2;UBERON:0002075,2.50e-07,19;UBERON:0001962,5.05e-07,2;UBERON:0001961,5.05e-07,2;UBERON:0001744,5.05e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.66018309265422,10.5287139042709,0,30.2843678743908,33.593036233406,16.9755860719212,0,0,0,1.11994695955385,2.98232065387321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,12.4159128482725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,110.048600550048,0.29688427812965,0,0,0,0,0.117588707135705,0.125666591329675,0,1.01219549843938,3.5384422077995,0.161766849947409,0.883366073841574,1.93950101254089,5.59175283654366,0,0,20.1811073614787,0,0,0,0,0,0,0,0,0,0,0,1.8661045591514,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0.660837565967596,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.810676133875177,0,0,0,0.312037673114561,0,0,0,2.03228509183265,0,0,0,0,0,0,0,0,0.221464689648775,0.637819074629948,1.14704320301017,0.518054945597687,0.433947175744535,0,0,1.96705709207614,9.65778612066564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0,2.65490276679926,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,30.7567585436135,0,0.555583582109135,1.50694765603753,2.05041341581538,11.4389086603261,0.509935289981566,0.839708713941948,0,0,0,0,0,0,0,0,0,0,0,9.32008969630389,0,0,0,0,0,0,0,0,0,0,0,3.79213344753814,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.292373642219257,0.481059208201647,0.350630706544707,0,0,0,0,1.35232715822533,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000103505}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|UniProt= | |||
|association_with_transcript=-49bp_to_ENSMUST00000103505_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000103505_5end | |||
|id=chr12:115947341..115947346,- | |||
|ontology_enrichment_celltype=CL:0000553!8.01e-08!6;CL:0000556!8.01e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.59e-14,6;CL:0000556,1.59e-14,6;CL:0000050,1.42e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.63e-12!51;UBERON:0007823!3.97e-08!5;UBERON:0002193!1.46e-07!48;UBERON:0003887!3.19e-07!10;UBERON:0002106!4.49e-07!6;UBERON:0004457!4.49e-07!6;UBERON:0000042!4.49e-07!6;UBERON:0004854!4.49e-07!6;UBERON:0009034!4.49e-07!6;UBERON:0002095!4.49e-07!6;UBERON:0004782!4.49e-07!6;UBERON:0003281!4.49e-07!6;UBERON:0009664!4.49e-07!6;UBERON:0002296!4.49e-07!6;UBERON:0005602!4.49e-07!6;UBERON:0001179!4.49e-07!6;UBERON:0006293!4.49e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.89e-11,51;UBERON:0002465,2.34e-10,3;UBERON:0002193,2.81e-09,48;UBERON:0002405,2.81e-09,48;UBERON:0002106,5.57e-09,6;UBERON:0004457,5.57e-09,6;UBERON:0000042,5.57e-09,6;UBERON:0004854,5.57e-09,6;UBERON:0009034,5.57e-09,6;UBERON:0002095,5.57e-09,6;UBERON:0004782,5.57e-09,6;UBERON:0003281,5.57e-09,6;UBERON:0009664,5.57e-09,6;UBERON:0002296,5.57e-09,6;UBERON:0005602,5.57e-09,6;UBERON:0001179,5.57e-09,6;UBERON:0006293,5.57e-09,6;UBERON:0003887,6.42e-08,10;UBERON:0001155,8.59e-08,2;UBERON:0000059,8.59e-08,2;UBERON:0001911,2.27e-07,2;UBERON:0000076,2.27e-07,2;UBERON:0005333,2.27e-07,2;UBERON:0008425,2.27e-07,2;UBERON:0005311,2.27e-07,2;UBERON:0002075,2.50e-07,19;UBERON:0001962,5.05e-07,2;UBERON:0001961,5.05e-07,2;UBERON:0001744,5.05e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.66018309265422,10.5287139042709,0,30.2843678743908,33.593036233406,16.9755860719212,0,0,0,1.11994695955385,2.98232065387321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,12.4159128482725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,110.048600550048,0.29688427812965,0,0,0,0,0.117588707135705,0.125666591329675,0,1.01219549843938,3.5384422077995,0.161766849947409,0.883366073841574,1.93950101254089,5.59175283654366,0,0,20.1811073614787,0,0,0,0,0,0,0,0,0,0,0,1.8661045591514,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0.660837565967596,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.810676133875177,0,0,0,0.312037673114561,0,0,0,2.03228509183265,0,0,0,0,0,0,0,0,0.221464689648775,0.637819074629948,1.14704320301017,0.518054945597687,0.433947175744535,0,0,1.96705709207614,9.65778612066564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0,2.65490276679926,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,30.7567585436135,0,0.555583582109135,1.50694765603753,2.05041341581538,11.4389086603261,0.509935289981566,0.839708713941948,0,0,0,0,0,0,0,0,0,0,0,9.32008969630389,0,0,0,0,0,0,0,0,0,0,0,3.79213344753814,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.292373642219257,0.481059208201647,0.350630706544707,0,0,0,0,1.35232715822533,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000103505 | |||
}} |
Revision as of 22:29, 12 September 2013
Short description: | p1@ENSMUST00000103505 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103505_5end |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | -49bp_to_ENSMUST00000103505_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.59e-14 | 6 |
megakaryocyte | 1.59e-14 | 6 |
megakaryocyte-erythroid progenitor cell | 1.42e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.89e-11 | 51 |
lymphoid system | 2.34e-10 | 3 |
hemolymphoid system | 2.81e-09 | 48 |
immune system | 2.81e-09 | 48 |
spleen | 5.57e-09 | 6 |
cavity lining | 5.57e-09 | 6 |
serous membrane | 5.57e-09 | 6 |
gastrointestinal system mesentery | 5.57e-09 | 6 |
stomach region | 5.57e-09 | 6 |
mesentery | 5.57e-09 | 6 |
gastrointestinal system serosa | 5.57e-09 | 6 |
mesentery of stomach | 5.57e-09 | 6 |
gut mesentery | 5.57e-09 | 6 |
dorsal mesentery | 5.57e-09 | 6 |
dorsal mesogastrium | 5.57e-09 | 6 |
peritoneal cavity | 5.57e-09 | 6 |
spleen primordium | 5.57e-09 | 6 |
intraembryonic coelom | 6.42e-08 | 10 |
colon | 8.59e-08 | 2 |
large intestine | 8.59e-08 | 2 |
mammary gland | 2.27e-07 | 2 |
external ectoderm | 2.27e-07 | 2 |
mammary bud | 2.27e-07 | 2 |
mammary ridge | 2.27e-07 | 2 |
mammary placode | 2.27e-07 | 2 |
viscus | 2.50e-07 | 19 |
gut-associated lymphoid tissue | 5.05e-07 | 2 |
mucosa-associated lymphoid tissue | 5.05e-07 | 2 |
lymphoid tissue | 5.05e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.