FFCP PHASE1:Mm9::chr3:54165025..54165038,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=50706|HGNC=|UniProt=Q62009|association_with_transcript=0bp_to_ENSMUST00000107983,ENSMUST00000107985,ENSMUST00000117373,NM_001198765,NM_001198766,NM_015784,uc008pfh.2,uc008pfi.2,uc008pfj.2_5end|description=CAGE_peak_1_at_Postn_5end|id=chr3:54165025..54165038,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!2.44e-09!333;UBERON:0007100!7.12e-07!18;UBERON:0000948!7.12e-07!18;UBERON:0005498!7.12e-07!18;UBERON:0004140!7.12e-07!18;UBERON:0009881!7.12e-07!18;UBERON:0004141!7.12e-07!18;UBERON:0003084!7.12e-07!18;UBERON:0007005!7.12e-07!18;UBERON:0004139!7.12e-07!18;UBERON:0004291!7.12e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.58e-07,18;UBERON:0000948,6.58e-07,18;UBERON:0005498,6.58e-07,18;UBERON:0004140,6.58e-07,18;UBERON:0009881,6.58e-07,18;UBERON:0004141,6.58e-07,18;UBERON:0003084,6.58e-07,18;UBERON:0007005,6.58e-07,18;UBERON:0004139,6.58e-07,18;UBERON:0004291,6.58e-07,18|phase1_expression=98.8118386636579,0,0,0,0,0.33575854382378,0.467225281191051,3.35720640948098,0,0,0,0,0,0.174840804837995,0.666219523631325,0.202475267389826,1.39912375625629,0,0.137114433605739,0,40.0553896611539,0.198581902401771,0,0,0.45881856213434,0,0,0,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,537.075825483813,321.466248897081,3.12029478674859,5.47673941043627,0,3.73466510648602,13.2212331370513,0.699932108126813,1.43752564364972,0,0,0,1299.41741141757,842.694846859884,264.02411124605,0.202316460859598,1.5869729378161,0.633831403506179,5.08266798103698,2.66788438833342,2.2497492932035,4.94433181283487,1.4209602298922,10.4860038681442,4.99483796918021,2.38486108309499,0.540023753326763,1.47227472945967,2.85650984403804,5.07997644188711,0.857435594504678,0.383381884072945,0,0,1.53224805702225,2.4577045320999,0.791317726381163,0.731901148819277,2.6045668527838,0.837548997004143,2.8138130501584,2.44477196442896,42.7211448936818,35.7352918805748,8.76077395378913,34.7583227399315,426.752599923018,18.8411917656091,73.1360295434178,2.719885334831,1.07940638327563,5.84798775702902,3.58421509677868,119.658645952253,37.4946709671727,18.4448063268037,14.4869225549239,161.688245903629,29.5150898052931,12.7402619853323,0,0,0,0,28.7743376892031,78.9760545123874,61.6034877119023,384.616969440523,352.57102388546,302.567532399949,311.845143303376,467.767876985834,124.158592233719,88.2486034811715,337.928697121834,36.2690326299448,1419.82764198841,379.626570233416,378.202697445473,141.657738525773,1.17112318804619,2.30391377494801,22.7356779135646,0.239630249011841,0.599902730993408,0.127070227073065,1.9472783122627,0.915001205637253,1.00523481690292,2.78118912307642,2.04572365864264,3.94797284663164,2.75810147215188,966.150044847951,514.920451355175,58.1262344397452,44.824115303819,30.5783040962354,141.159892122152,272.974188784909,535.755627405967,438.495237030308,423.415845541429,325.332387671379,147.978328062717,1.29340795759705,52.3823842064859,131.083587502142,340.630168192451,551.367695214361,1428.87863924045,1974.89116310703,82.2011521960377,0,0.51469581422943,0.284163499395593,144.57378922978,266.421604138525,333.835061948722,399.86185840342,456.099489190482,619.228191129936,696.904232416972,688.657821392822,787.231938239457,817.862454069998,840.537416084968,330.031123661179,158.042186406784,164.882136583579,150.713808267897,1.47202963994889,12.8630765474106,4.62586296177317,24.8583532663732,123.920473560971,163.494616989749,207.734347651214,121.816848872499,128.089753254645,180.714344806931,108.667155093693,186.109818838132,303.864267439526,354.938346121413,355.224566731037,120.441800759666,174.423406248878,116.29850358055,28.0708493410561,134.81324487948,87.9120338250027,108.749809069398,115.98358732624,108.570249190213,102.63289975267,15.7942858338174,19.9388384358546,17.0288086212085,24.3091154211462,42.7123470633201,56.2158726023761,38.0016969930403,41.7891850060316,47.2707233114737,62.3833336864478,52.6483931534983,76.0414213574916,80.995616890484,109.263836960789,167.091285503158,147.281781710073,85.3716607461238,57.4071723270119,52.1039003072437,224.290372862258,78.8284272965217,86.8603324435998,98.2824046638339,113.590080171635,195.647308692041,314.217605969538,263.235290960171,676.570038503772,704.479177772753,627.295059898554,363.448832039507,418.070341097333,335.007219674781,0,1.08781136763742,219.818630039509,330.572222073069,0.80275294993896,2.69586879162067,84.2625619236112,456.214965458302,698.535197787592,780.096611104684,563.332185071269,483.911815853918,497.509439225986,334.313382861611,459.05533569933,553.824850741936,547.473572455935,3.53453448063988,146.624108020141,438.931713039784,758.727456668957,272.035732781711,2.65490276679926,48.3133465948413,63.4879469625977,136.172867583758,165.959663798994,376.608056231311,401.339139290247,493.315270900975,594.637627145715,185.197540150388,64.3053512307493,41.2542172992747,0.680879211507576,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| ||
|EntrezGene=50706 | |||
|HGNC= | |||
|UniProt=Q62009 | |||
|association_with_transcript=0bp_to_ENSMUST00000107983,ENSMUST00000107985,ENSMUST00000117373,NM_001198765,NM_001198766,NM_015784,uc008pfh.2,uc008pfi.2,uc008pfj.2_5end | |||
|description=CAGE_peak_1_at_Postn_5end | |||
|id=chr3:54165025..54165038,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.44e-09!333;UBERON:0007100!7.12e-07!18;UBERON:0000948!7.12e-07!18;UBERON:0005498!7.12e-07!18;UBERON:0004140!7.12e-07!18;UBERON:0009881!7.12e-07!18;UBERON:0004141!7.12e-07!18;UBERON:0003084!7.12e-07!18;UBERON:0007005!7.12e-07!18;UBERON:0004139!7.12e-07!18;UBERON:0004291!7.12e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.58e-07,18;UBERON:0000948,6.58e-07,18;UBERON:0005498,6.58e-07,18;UBERON:0004140,6.58e-07,18;UBERON:0009881,6.58e-07,18;UBERON:0004141,6.58e-07,18;UBERON:0003084,6.58e-07,18;UBERON:0007005,6.58e-07,18;UBERON:0004139,6.58e-07,18;UBERON:0004291,6.58e-07,18 | |||
|phase1_expression=98.8118386636579,0,0,0,0,0.33575854382378,0.467225281191051,3.35720640948098,0,0,0,0,0,0.174840804837995,0.666219523631325,0.202475267389826,1.39912375625629,0,0.137114433605739,0,40.0553896611539,0.198581902401771,0,0,0.45881856213434,0,0,0,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,537.075825483813,321.466248897081,3.12029478674859,5.47673941043627,0,3.73466510648602,13.2212331370513,0.699932108126813,1.43752564364972,0,0,0,1299.41741141757,842.694846859884,264.02411124605,0.202316460859598,1.5869729378161,0.633831403506179,5.08266798103698,2.66788438833342,2.2497492932035,4.94433181283487,1.4209602298922,10.4860038681442,4.99483796918021,2.38486108309499,0.540023753326763,1.47227472945967,2.85650984403804,5.07997644188711,0.857435594504678,0.383381884072945,0,0,1.53224805702225,2.4577045320999,0.791317726381163,0.731901148819277,2.6045668527838,0.837548997004143,2.8138130501584,2.44477196442896,42.7211448936818,35.7352918805748,8.76077395378913,34.7583227399315,426.752599923018,18.8411917656091,73.1360295434178,2.719885334831,1.07940638327563,5.84798775702902,3.58421509677868,119.658645952253,37.4946709671727,18.4448063268037,14.4869225549239,161.688245903629,29.5150898052931,12.7402619853323,0,0,0,0,28.7743376892031,78.9760545123874,61.6034877119023,384.616969440523,352.57102388546,302.567532399949,311.845143303376,467.767876985834,124.158592233719,88.2486034811715,337.928697121834,36.2690326299448,1419.82764198841,379.626570233416,378.202697445473,141.657738525773,1.17112318804619,2.30391377494801,22.7356779135646,0.239630249011841,0.599902730993408,0.127070227073065,1.9472783122627,0.915001205637253,1.00523481690292,2.78118912307642,2.04572365864264,3.94797284663164,2.75810147215188,966.150044847951,514.920451355175,58.1262344397452,44.824115303819,30.5783040962354,141.159892122152,272.974188784909,535.755627405967,438.495237030308,423.415845541429,325.332387671379,147.978328062717,1.29340795759705,52.3823842064859,131.083587502142,340.630168192451,551.367695214361,1428.87863924045,1974.89116310703,82.2011521960377,0,0.51469581422943,0.284163499395593,144.57378922978,266.421604138525,333.835061948722,399.86185840342,456.099489190482,619.228191129936,696.904232416972,688.657821392822,787.231938239457,817.862454069998,840.537416084968,330.031123661179,158.042186406784,164.882136583579,150.713808267897,1.47202963994889,12.8630765474106,4.62586296177317,24.8583532663732,123.920473560971,163.494616989749,207.734347651214,121.816848872499,128.089753254645,180.714344806931,108.667155093693,186.109818838132,303.864267439526,354.938346121413,355.224566731037,120.441800759666,174.423406248878,116.29850358055,28.0708493410561,134.81324487948,87.9120338250027,108.749809069398,115.98358732624,108.570249190213,102.63289975267,15.7942858338174,19.9388384358546,17.0288086212085,24.3091154211462,42.7123470633201,56.2158726023761,38.0016969930403,41.7891850060316,47.2707233114737,62.3833336864478,52.6483931534983,76.0414213574916,80.995616890484,109.263836960789,167.091285503158,147.281781710073,85.3716607461238,57.4071723270119,52.1039003072437,224.290372862258,78.8284272965217,86.8603324435998,98.2824046638339,113.590080171635,195.647308692041,314.217605969538,263.235290960171,676.570038503772,704.479177772753,627.295059898554,363.448832039507,418.070341097333,335.007219674781,0,1.08781136763742,219.818630039509,330.572222073069,0.80275294993896,2.69586879162067,84.2625619236112,456.214965458302,698.535197787592,780.096611104684,563.332185071269,483.911815853918,497.509439225986,334.313382861611,459.05533569933,553.824850741936,547.473572455935,3.53453448063988,146.624108020141,438.931713039784,758.727456668957,272.035732781711,2.65490276679926,48.3133465948413,63.4879469625977,136.172867583758,165.959663798994,376.608056231311,401.339139290247,493.315270900975,594.637627145715,185.197540150388,64.3053512307493,41.2542172992747,0.680879211507576,71.4842543304302,32.7277469970369,95.8086546591218,140.453465044681,176.228391790846,165.371765705132,77.0296321259936,73.2175729158776,40.2480934641258,53.1473439312458,140.3182012532,1579.60648636604,1157.94784569566,772.339065700293,428.571889234355,138.161916562549,1.29797711407357,4.44264290074417,97.2082148106778,51.6692731361496,23.3576886685817,7.92826520781946,9.83746144788047,8.83887835968048,7.97723278244851,5.94259887359022,153.701969500433,21.5108475635172,87.0207319302912,76.2517706201917,118.134887248175,158.967946407217,290.902395152058,529.478037376502,353.632277620424,372.124588320737,181.431079421382,0,19.4371509857172,15.5530981029672,30.5288365700155,44.0434998059063,45.1112855060378,91.0692171891051,169.786517836511,37.4347859599788,6.03960302065015,26.2107305694658,23.068811805857,200.292512706682,226.066816719785,142.653063629619,140.356929403305,130.533650091291,79.9299739307793,89.6475429949684,76.1287032609033,49.0009766791649,36.9023837600836,27.9704117723089,24.7264433015647,25.0116570668558,65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| |||
|short_description=p1@Postn | |||
}} | |||
Revision as of 02:18, 14 September 2013
| Short description: | p1@Postn |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Postn_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000107983, ENSMUST00000107985, ENSMUST00000117373, NM_001198765, NM_001198766, NM_015784, uc008pfh.2, uc008pfi.2, uc008pfj.2_5end |
| EntrezGene: | Postn |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| primary circulatory organ | 6.58e-07 | 18 |
| heart | 6.58e-07 | 18 |
| primitive heart tube | 6.58e-07 | 18 |
| primary heart field | 6.58e-07 | 18 |
| anterior lateral plate mesoderm | 6.58e-07 | 18 |
| heart tube | 6.58e-07 | 18 |
| heart primordium | 6.58e-07 | 18 |
| cardiac mesoderm | 6.58e-07 | 18 |
| cardiogenic plate | 6.58e-07 | 18 |
| heart rudiment | 6.58e-07 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
