FFCP PHASE1:Mm9::chr10:77532096..77532116,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=50723|HGNC=|MCL_coexpression_id=18|UniProt=Q9JHJ8,Q544C7|association_with_transcript=0bp_to_ENSMUST00000095482,ENSMUST00000105393,NM_015790,uc007fxi.1,uc011xhs.1_5end|description=CAGE_peak_1_at_Icosl_5end|id=chr10:77532096..77532116,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!8.50e-09!193;UBERON:0004120!8.50e-09!193;UBERON:0006603!8.50e-09!193;UBERON:0002193!4.07e-07!48;UBERON:0007023!4.62e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.82e-07,48;UBERON:0002405,1.82e-07,48;UBERON:0007023,4.59e-07,51|phase1_expression=1.92178616525753,2.44282785347553,1.81999695755814,9.0739263392049,8.01433167914156,3.69334398206158,5.60670337429262,1.54947988129892,2.111830832275,1.63845168425395,0.171217968225505,0.0797721589953364,2.73921167889929,1.74840804837995,20.9859149943868,23.8920815519995,6.99561878128147,134.860075690647,135.606174836076,120.102271458843,5.3577272795174,2.18440092641948,1.82839852397255,4.7997726838022,5.96464130774642,1.14846392823004,5.1691439539089,1.939241094173,3.6104449696711,1.51218077855958,1.10865255327652,0.635030673459631,0,0,3.17736781726402,2.99222361645286,2.6542016314108,37.2493151355848,20.3147189576188,19.3703785270305,51.7643709467293,38.250547157673,31.0726625939938,5.66535680890098,6.38674666682942,1.65192076945513,0,1.09012578190223,3.29529274101708,1.94429899074283,1.53985063787899,2.87505128729943,51.8448252718405,4.35217285206807,1.68046899571232,1.28629718017973,0.573066879877513,1.54701627683233,0.404632921719196,0.528990979272033,0,0,0.889294796111139,6.29929802096979,8.89979726310277,7.8152812644071,5.39280198933128,7.68436610643109,0.207379224616955,0.270011876663381,0,0,0.662605622854841,0.244981598429908,0,0,0,1.91531007127782,1.22885226604995,0,0.0914876436024097,0,1.95428099300967,3.37657566019008,4.73674568108111,1.17851434189467,0.854230084794618,0,0.984440513331393,0,11.5945795480671,1.72084775396277,6.11974200336975,0,0.649776417447669,0,7.72444310724635,0.170430322578058,0,0,0.985903938436763,0,0,0,0,0,0,6.62266502370548,168.568562254309,14.398887489288,2.08182392119363,3.04465478312141,2.30615497256059,5.42601505989441,4.9387256996996,13.0693254982862,1.97755974187499,9.39895819979426,8.84610551949874,1.61766849947409,2.65009822152472,2.42437626567611,13.0474232852686,8.49064311333487,8.79676168616511,9.96282515313506,3.23500836165985,2.99951365496704,2.66847476853436,3.2953940669061,6.40500843946077,0,2.60736480288415,2.04572365864264,4.77912502486988,3.0825839982874,6.92507674182151,11.0722203842983,18.4487613656583,9.46988351489133,0.390361328888111,0.459804208866946,1.26043490863744,1.20563854268572,0.95251098811859,0.896796041993948,1.21812241927647,4.13925393182425,0.862271971731369,2.26927296201383,0.879755620819744,1.09597866213787,3.05851974148158,3.83077383174383,4.93877127379064,0.199034266818493,2.1066395619397,2.05878325691772,2.55747149456033,0.621377317606506,0.703578179943289,0.36012412292203,1.18372367792605,1.77087808572663,2.00547246753592,1.86027155800326,1.07309360559848,1.40118410840603,2.46839774870221,2.95501435342371,2.67527071501324,2.92399974850665,7.02560368931362,6.44190810049784,7.57043814830858,1.54356918568927,6.93879444265976,6.08236303326152,0.426576501070468,0.464473343720877,1.80414445850931,3.22693639397348,4.66993892074228,5.32631753115166,7.11793592316767,5.27036655116835,7.03738584640755,6.76452004939913,7.21367122340745,8.98819408654222,8.42938394511308,7.56736838366595,3.60369011810855,1.82797620175566,4.50830942692322,4.48032921259691,5.81857461502877,4.06787755363848,8.09427675190493,11.6612016903886,8.79192875911699,7.28043267138623,1.48226313543574,1.33476084572875,1.57247196090562,2.69834534861824,2.23146133527353,1.92941727801933,1.2731292589071,3.74004978686054,2.10775794807546,3.0201755450689,5.75072826109418,3.34926852901653,0.936113019343682,1.26289438973556,0.896987067609561,1.4473305640901,21.985629629826,0.947457058852424,4.4000543639347,4.07388205860452,3.75504397261603,9.71536293162531,7.14130922658041,5.46374214001837,4.88668946729192,3.5434350343804,5.10255259703959,14.4199716949849,13.9874835311375,9.83613598354279,12.0633027151418,21.2123216689297,7.37646409528554,6.62248191131358,6.42202359951168,3.28192722458169,0.163934945376675,1.76729649043061,2.2085575359138,3.90438744296638,0.646270193198397,0.238968797952552,0.445597348164788,0.283076530788832,1.61924280669958,0,1.18586333383957,1.60660658210904,23.9878744001974,2.49291845134157,5.21238269931443,21.1161757404845,3.98235415019888,3.15614827001476,3.02323556964751,3.20628635585027,2.95301892880773,3.07435147943927,4.9101375701962,5.81653967164009,4.63446591900138,6.32073515871632,3.16255825724996,1.03135543248187,3.40439605753788,0.540183282093931,1.29358683782755,0.857348140126369,0.709360934569094,1.96205699362278,1.31639216481697,0.913394847343798,0.469343416127421,1.48282449604674,2.20528398054962,8.07942639413252,10.4951877352339,4.70440814439616,6.32673423216623,6.07321329056727,9.03590593552537,7.78786268444141,35.7120140867512,5.15967169908056,8.14855920426731,7.34636982318295,21.0509110690379,26.7670462651631,5.60928818979723,2.93898049879682,6.21899882119907,25.7761066864081,0.632671987162271,2.64315307264903,4.21220829205025,3.97267762427491,6.33251434863915,4.31565908431426,8.18269211680826,10.9937495633292,8.16574331738295,13.6694648879124,0,0.747582730219894,1.15820943319968,5.44463327363333,4.39143399824286,9.79945527846513,11.8530811032212,7.94246747548096,6.18670132111694,3.14059357073808,3.16833006883652,13.5884781870117,4.66267995167378,8.93585327333997,9.87398254631242,6.98204113103178,4.56967115996909,5.04820887983869,6.64602872285597,6.3608863467333,4.95344243257499,7.76361625553672,10.8178247621125,6.06134602334076,7.71387554398355,9.29594572822367,5.10567692760349,2.06341870201794,1.51096154727671,8.50034213741638,4.87974436173073,9.15758121336325,9.21784030039983,5.01572104035363,0.564751842617067,0.920650473014354,2.29158205375759,0.859265911718438,2.05524755931193,1.5107877947794,1.35004500046361,0.900642406448441,1.81256963593682,1.55328093525546,0.415149390336707,0.399024873401031,1.02440163452481,1.94485373654635,0.628839487883947,1.65459157605013,3.33370091702423,2.26638562962784,1.92551525755089,2.77966932940177,1.77435509923168,2.26351609663291,2.43467919421694,2.56100609619477,2.12511235135769,0.476293691283074,1.73826488917283,2.31491064556446,2.47251540481984,2.50238164228475,2.05721551431249,1.24233064311536,2.38436189947321,2.76158191601424,2.4468438907986,2.45382362885862,1.46342378298218,2.63069711437843,1.90125759384206,3.36685362994643,2.01679530811096,1.77308068276014,2.45538625901814,1.39443157067369,1.73615949883027,2.99772693525535,3.50897412668113,3.65280791882107,1.3390183244819,2.8676884485537,3.01428186306548|short_description=p1@Icosl}} | ||
|EntrezGene=50723 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=Q9JHJ8,Q544C7 | |||
|association_with_transcript=0bp_to_ENSMUST00000095482,ENSMUST00000105393,NM_015790,uc007fxi.1,uc011xhs.1_5end | |||
|description=CAGE_peak_1_at_Icosl_5end | |||
|id=chr10:77532096..77532116,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!8.50e-09!193;UBERON:0004120!8.50e-09!193;UBERON:0006603!8.50e-09!193;UBERON:0002193!4.07e-07!48;UBERON:0007023!4.62e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.82e-07,48;UBERON:0002405,1.82e-07,48;UBERON:0007023,4.59e-07,51 | |||
|phase1_expression=1.92178616525753,2.44282785347553,1.81999695755814,9.0739263392049,8.01433167914156,3.69334398206158,5.60670337429262,1.54947988129892,2.111830832275,1.63845168425395,0.171217968225505,0.0797721589953364,2.73921167889929,1.74840804837995,20.9859149943868,23.8920815519995,6.99561878128147,134.860075690647,135.606174836076,120.102271458843,5.3577272795174,2.18440092641948,1.82839852397255,4.7997726838022,5.96464130774642,1.14846392823004,5.1691439539089,1.939241094173,3.6104449696711,1.51218077855958,1.10865255327652,0.635030673459631,0,0,3.17736781726402,2.99222361645286,2.6542016314108,37.2493151355848,20.3147189576188,19.3703785270305,51.7643709467293,38.250547157673,31.0726625939938,5.66535680890098,6.38674666682942,1.65192076945513,0,1.09012578190223,3.29529274101708,1.94429899074283,1.53985063787899,2.87505128729943,51.8448252718405,4.35217285206807,1.68046899571232,1.28629718017973,0.573066879877513,1.54701627683233,0.404632921719196,0.528990979272033,0,0,0.889294796111139,6.29929802096979,8.89979726310277,7.8152812644071,5.39280198933128,7.68436610643109,0.207379224616955,0.270011876663381,0,0,0.662605622854841,0.244981598429908,0,0,0,1.91531007127782,1.22885226604995,0,0.0914876436024097,0,1.95428099300967,3.37657566019008,4.73674568108111,1.17851434189467,0.854230084794618,0,0.984440513331393,0,11.5945795480671,1.72084775396277,6.11974200336975,0,0.649776417447669,0,7.72444310724635,0.170430322578058,0,0,0.985903938436763,0,0,0,0,0,0,6.62266502370548,168.568562254309,14.398887489288,2.08182392119363,3.04465478312141,2.30615497256059,5.42601505989441,4.9387256996996,13.0693254982862,1.97755974187499,9.39895819979426,8.84610551949874,1.61766849947409,2.65009822152472,2.42437626567611,13.0474232852686,8.49064311333487,8.79676168616511,9.96282515313506,3.23500836165985,2.99951365496704,2.66847476853436,3.2953940669061,6.40500843946077,0,2.60736480288415,2.04572365864264,4.77912502486988,3.0825839982874,6.92507674182151,11.0722203842983,18.4487613656583,9.46988351489133,0.390361328888111,0.459804208866946,1.26043490863744,1.20563854268572,0.95251098811859,0.896796041993948,1.21812241927647,4.13925393182425,0.862271971731369,2.26927296201383,0.879755620819744,1.09597866213787,3.05851974148158,3.83077383174383,4.93877127379064,0.199034266818493,2.1066395619397,2.05878325691772,2.55747149456033,0.621377317606506,0.703578179943289,0.36012412292203,1.18372367792605,1.77087808572663,2.00547246753592,1.86027155800326,1.07309360559848,1.40118410840603,2.46839774870221,2.95501435342371,2.67527071501324,2.92399974850665,7.02560368931362,6.44190810049784,7.57043814830858,1.54356918568927,6.93879444265976,6.08236303326152,0.426576501070468,0.464473343720877,1.80414445850931,3.22693639397348,4.66993892074228,5.32631753115166,7.11793592316767,5.27036655116835,7.03738584640755,6.76452004939913,7.21367122340745,8.98819408654222,8.42938394511308,7.56736838366595,3.60369011810855,1.82797620175566,4.50830942692322,4.48032921259691,5.81857461502877,4.06787755363848,8.09427675190493,11.6612016903886,8.79192875911699,7.28043267138623,1.48226313543574,1.33476084572875,1.57247196090562,2.69834534861824,2.23146133527353,1.92941727801933,1.2731292589071,3.74004978686054,2.10775794807546,3.0201755450689,5.75072826109418,3.34926852901653,0.936113019343682,1.26289438973556,0.896987067609561,1.4473305640901,21.985629629826,0.947457058852424,4.4000543639347,4.07388205860452,3.75504397261603,9.71536293162531,7.14130922658041,5.46374214001837,4.88668946729192,3.5434350343804,5.10255259703959,14.4199716949849,13.9874835311375,9.83613598354279,12.0633027151418,21.2123216689297,7.37646409528554,6.62248191131358,6.42202359951168,3.28192722458169,0.163934945376675,1.76729649043061,2.2085575359138,3.90438744296638,0.646270193198397,0.238968797952552,0.445597348164788,0.283076530788832,1.61924280669958,0,1.18586333383957,1.60660658210904,23.9878744001974,2.49291845134157,5.21238269931443,21.1161757404845,3.98235415019888,3.15614827001476,3.02323556964751,3.20628635585027,2.95301892880773,3.07435147943927,4.9101375701962,5.81653967164009,4.63446591900138,6.32073515871632,3.16255825724996,1.03135543248187,3.40439605753788,0.540183282093931,1.29358683782755,0.857348140126369,0.709360934569094,1.96205699362278,1.31639216481697,0.913394847343798,0.469343416127421,1.48282449604674,2.20528398054962,8.07942639413252,10.4951877352339,4.70440814439616,6.32673423216623,6.07321329056727,9.03590593552537,7.78786268444141,35.7120140867512,5.15967169908056,8.14855920426731,7.34636982318295,21.0509110690379,26.7670462651631,5.60928818979723,2.93898049879682,6.21899882119907,25.7761066864081,0.632671987162271,2.64315307264903,4.21220829205025,3.97267762427491,6.33251434863915,4.31565908431426,8.18269211680826,10.9937495633292,8.16574331738295,13.6694648879124,0,0.747582730219894,1.15820943319968,5.44463327363333,4.39143399824286,9.79945527846513,11.8530811032212,7.94246747548096,6.18670132111694,3.14059357073808,3.16833006883652,13.5884781870117,4.66267995167378,8.93585327333997,9.87398254631242,6.98204113103178,4.56967115996909,5.04820887983869,6.64602872285597,6.3608863467333,4.95344243257499,7.76361625553672,10.8178247621125,6.06134602334076,7.71387554398355,9.29594572822367,5.10567692760349,2.06341870201794,1.51096154727671,8.50034213741638,4.87974436173073,9.15758121336325,9.21784030039983,5.01572104035363,0.564751842617067,0.920650473014354,2.29158205375759,0.859265911718438,2.05524755931193,1.5107877947794,1.35004500046361,0.900642406448441,1.81256963593682,1.55328093525546,0.415149390336707,0.399024873401031,1.02440163452481,1.94485373654635,0.628839487883947,1.65459157605013,3.33370091702423,2.26638562962784,1.92551525755089,2.77966932940177,1.77435509923168,2.26351609663291,2.43467919421694,2.56100609619477,2.12511235135769,0.476293691283074,1.73826488917283,2.31491064556446,2.47251540481984,2.50238164228475,2.05721551431249,1.24233064311536,2.38436189947321,2.76158191601424,2.4468438907986,2.45382362885862,1.46342378298218,2.63069711437843,1.90125759384206,3.36685362994643,2.01679530811096,1.77308068276014,2.45538625901814,1.39443157067369,1.73615949883027,2.99772693525535,3.50897412668113,3.65280791882107,1.3390183244819,2.8676884485537,3.01428186306548 | |||
|short_description=p1@Icosl | |||
}} | |||
Revision as of 17:28, 12 September 2013
| Short description: | p1@Icosl |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Icosl_5end |
| Coexpression cluster: | MCL_coexpression_mm9:18 |
| Association with transcript: | 0bp_to_ENSMUST00000095482, ENSMUST00000105393, NM_015790, uc007fxi.1, uc011xhs.1_5end |
| EntrezGene: | Icosl |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hemolymphoid system | 1.82e-07 | 48 |
| immune system | 1.82e-07 | 48 |
| adult organism | 4.59e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
