FFCP PHASE1:Mm9::chr11:121313268..121313284,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=108903|HGNC=|UniProt=Q8BYA0,A2AAV4|association_with_transcript=5bp_to_ENSMUST00000103013,NM_029878,uc007mvy.2_5end|description=CAGE_peak_2_at_Tbcd_5end|id=chr11:121313268..121313284,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!8.60e-08!71;UBERON:0003075!8.60e-08!71;UBERON:0007284!8.60e-08!71|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.64e-08,92;UBERON:0002346,9.98e-07,64;UBERON:0003075,9.98e-07,64;UBERON:0007284,9.98e-07,64|phase1_expression=1.76163731815273,0.348975407639361,1.36499771816861,0.60492842261366,1.50268718983904,2.01455126294268,0.233612640595526,0.774739940649458,0.140788722151667,0.468129052643987,0.513653904676515,0.797721589953364,0.856003649656029,1.57356724354195,0,1.41732687172878,2.79824751251259,1.10411757875383,0.548457734422955,0.42438965179803,1.27564935226605,0.297872853602656,0.783599367416806,0.47997726838022,0,0.57423196411502,0.86152399231815,0.646413698057667,0.760093677825496,0.252030129759931,1.99557459589774,0.635030673459631,1.84519436275371,0,1.1554064790051,1.99481574430191,2.04169356262369,0.418531630736908,0,1.57057123192139,0,0,0.971020706062307,2.01434908760924,1.92616169317078,3.48738829107195,1.56478268869608,2.39827672018491,2.19686182734472,1.36100929351998,1.95980990275508,0,0.838913030288682,0.725362142011344,1.00828139742739,2.05807548828758,2.0057340795713,1.03134418455488,2.42779753031517,2.64495489636016,2.53532561402472,1.69422266034566,1.77858959222228,1.3498495759221,0.988866362566974,0.7104801149461,0.898800331555214,0.384218305321555,2.28117147078651,3.51015439662396,3.15487442027073,4.57041575046086,2.20868540951614,3.55223317723367,4.02550978276593,0.919218786610021,1.10115880999389,1.27687338085188,0.921639199537461,4.08847491963601,4.48289453651807,4.68822033501084,1.67509799400829,1.12552522006336,1.22238598221448,1.47314292736834,2.70506193518296,2.42319279572891,1.96888102666279,2.56943304363071,1.15945795480671,1.72084775396277,0.679971333707751,1.07940638327563,0,0.448026887097336,0.842666520790511,1.1930122580464,0.779358013808606,0,2.81686839553361,0,2.54805239706646,0,1.73192832808971,2.02687892380079,1.01104889002957,0.22836775943812,1.29468941823586,1.92974780784272,2.25530924795977,1.52232739156071,1.84492397804847,1.95939432718409,2.23418543557839,1.63366568728578,0.741584903203122,0.722996784599558,0.884610551949874,1.45590164952668,1.76673214768315,0.969750506270444,0,2.34224637609238,3.97948742945565,1.53274233125155,2.03685711660064,1.19980546198682,1.52484272487678,1.79748767285787,0.457500602818626,2.76439574648302,1.73824320192276,1.27857728665165,0.83115217823824,1.1356888414743,1.52759045775474,1.36847667671102,2.27450482590307,0.841767423545896,2.21204753036596,2.75882525320168,2.34080768746954,2.26057226753573,3.46986145671772,3.84341160854549,3.18585863503078,2.58703370739016,3.88022387279116,1.51284864134255,2.46331573829528,1.09597866213787,1.94633074457919,1.39300866608867,1.64625709126355,1.79130840136644,0.702213187313235,1.80143534980301,1.70498099637356,3.10688658803253,2.11073453982987,0.720248245844059,1.42046841351126,1.96764231747404,2.00547246753592,1.86027155800326,1.60964040839772,1.16765342367169,1.81015834904829,1.80584210487005,1.13496333364198,1.60819986167866,0.439100230582101,0.939444931322602,1.26173969138476,3.08713837137853,0.991256348951394,1.05780226665418,1.49301775374664,2.32236671860439,2.19074684247559,1.61346819698674,1.11189021922435,1.52180500890047,2.84717436926707,1.64698954724011,1.75934646160189,1.59165177632921,1.36474860983384,1.79763881730844,1.51296634912286,0.597423819763102,1.32767530667157,2.39921876480431,2.25415471346161,1.83286195060783,0.969762435838129,1.61312385747733,1.89709611372772,1.18088118383682,1.255989822731,1.60416313098341,0.296452627087149,1.00107063429656,1.96558995113203,0.899448449539415,1.42002084971952,1.4470629585145,0.763877555344259,1.43848068725405,1.45921704097532,2.74561413188081,0,1.86070473834252,1.5601883655728,1.26289438973556,1.4351793081753,0.482443521363367,0.554259570499814,1.89491411770485,1.79261474086228,1.35796068620151,1.17345124144251,1.34005005953453,1.19021820443007,1.75620283072019,1.41871629695572,2.87904096543407,2.23236676120482,1.96635977658886,2.93564469172023,1.3018415272336,0,1.08781136763742,0,0.551873492609465,1.60550589987792,1.75817529888305,2.13115428989678,0.757412781613119,1.89304931649754,0.390438744296638,0.861693590931196,0.238968797952552,1.55959071857676,1.13230612315533,1.21443210502468,0.292255857911312,2.76701444562566,2.24924921495265,1.27746076687442,2.13678724400706,2.11753047159649,1.15479086080775,0,2.6705869977048,0.906970670894253,0.943025398779491,0.885905678642318,1.22974059177571,1.03371317267288,1.81766864738753,0.712994756769443,0.632073515871632,1.05418608574999,3.09406629744561,1.02131881726136,2.70091641046965,1.55230420539305,3.00071849044229,1.06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| ||
|EntrezGene=108903 | |||
|HGNC= | |||
|UniProt=Q8BYA0,A2AAV4 | |||
|association_with_transcript=5bp_to_ENSMUST00000103013,NM_029878,uc007mvy.2_5end | |||
|description=CAGE_peak_2_at_Tbcd_5end | |||
|id=chr11:121313268..121313284,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.60e-08!71;UBERON:0003075!8.60e-08!71;UBERON:0007284!8.60e-08!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.64e-08,92;UBERON:0002346,9.98e-07,64;UBERON:0003075,9.98e-07,64;UBERON:0007284,9.98e-07,64 | |||
|phase1_expression=1.76163731815273,0.348975407639361,1.36499771816861,0.60492842261366,1.50268718983904,2.01455126294268,0.233612640595526,0.774739940649458,0.140788722151667,0.468129052643987,0.513653904676515,0.797721589953364,0.856003649656029,1.57356724354195,0,1.41732687172878,2.79824751251259,1.10411757875383,0.548457734422955,0.42438965179803,1.27564935226605,0.297872853602656,0.783599367416806,0.47997726838022,0,0.57423196411502,0.86152399231815,0.646413698057667,0.760093677825496,0.252030129759931,1.99557459589774,0.635030673459631,1.84519436275371,0,1.1554064790051,1.99481574430191,2.04169356262369,0.418531630736908,0,1.57057123192139,0,0,0.971020706062307,2.01434908760924,1.92616169317078,3.48738829107195,1.56478268869608,2.39827672018491,2.19686182734472,1.36100929351998,1.95980990275508,0,0.838913030288682,0.725362142011344,1.00828139742739,2.05807548828758,2.0057340795713,1.03134418455488,2.42779753031517,2.64495489636016,2.53532561402472,1.69422266034566,1.77858959222228,1.3498495759221,0.988866362566974,0.7104801149461,0.898800331555214,0.384218305321555,2.28117147078651,3.51015439662396,3.15487442027073,4.57041575046086,2.20868540951614,3.55223317723367,4.02550978276593,0.919218786610021,1.10115880999389,1.27687338085188,0.921639199537461,4.08847491963601,4.48289453651807,4.68822033501084,1.67509799400829,1.12552522006336,1.22238598221448,1.47314292736834,2.70506193518296,2.42319279572891,1.96888102666279,2.56943304363071,1.15945795480671,1.72084775396277,0.679971333707751,1.07940638327563,0,0.448026887097336,0.842666520790511,1.1930122580464,0.779358013808606,0,2.81686839553361,0,2.54805239706646,0,1.73192832808971,2.02687892380079,1.01104889002957,0.22836775943812,1.29468941823586,1.92974780784272,2.25530924795977,1.52232739156071,1.84492397804847,1.95939432718409,2.23418543557839,1.63366568728578,0.741584903203122,0.722996784599558,0.884610551949874,1.45590164952668,1.76673214768315,0.969750506270444,0,2.34224637609238,3.97948742945565,1.53274233125155,2.03685711660064,1.19980546198682,1.52484272487678,1.79748767285787,0.457500602818626,2.76439574648302,1.73824320192276,1.27857728665165,0.83115217823824,1.1356888414743,1.52759045775474,1.36847667671102,2.27450482590307,0.841767423545896,2.21204753036596,2.75882525320168,2.34080768746954,2.26057226753573,3.46986145671772,3.84341160854549,3.18585863503078,2.58703370739016,3.88022387279116,1.51284864134255,2.46331573829528,1.09597866213787,1.94633074457919,1.39300866608867,1.64625709126355,1.79130840136644,0.702213187313235,1.80143534980301,1.70498099637356,3.10688658803253,2.11073453982987,0.720248245844059,1.42046841351126,1.96764231747404,2.00547246753592,1.86027155800326,1.60964040839772,1.16765342367169,1.81015834904829,1.80584210487005,1.13496333364198,1.60819986167866,0.439100230582101,0.939444931322602,1.26173969138476,3.08713837137853,0.991256348951394,1.05780226665418,1.49301775374664,2.32236671860439,2.19074684247559,1.61346819698674,1.11189021922435,1.52180500890047,2.84717436926707,1.64698954724011,1.75934646160189,1.59165177632921,1.36474860983384,1.79763881730844,1.51296634912286,0.597423819763102,1.32767530667157,2.39921876480431,2.25415471346161,1.83286195060783,0.969762435838129,1.61312385747733,1.89709611372772,1.18088118383682,1.255989822731,1.60416313098341,0.296452627087149,1.00107063429656,1.96558995113203,0.899448449539415,1.42002084971952,1.4470629585145,0.763877555344259,1.43848068725405,1.45921704097532,2.74561413188081,0,1.86070473834252,1.5601883655728,1.26289438973556,1.4351793081753,0.482443521363367,0.554259570499814,1.89491411770485,1.79261474086228,1.35796068620151,1.17345124144251,1.34005005953453,1.19021820443007,1.75620283072019,1.41871629695572,2.87904096543407,2.23236676120482,1.96635977658886,2.93564469172023,1.3018415272336,0,1.08781136763742,0,0.551873492609465,1.60550589987792,1.75817529888305,2.13115428989678,0.757412781613119,1.89304931649754,0.390438744296638,0.861693590931196,0.238968797952552,1.55959071857676,1.13230612315533,1.21443210502468,0.292255857911312,2.76701444562566,2.24924921495265,1.27746076687442,2.13678724400706,2.11753047159649,1.15479086080775,0,2.6705869977048,0.906970670894253,0.943025398779491,0.885905678642318,1.22974059177571,1.03371317267288,1.81766864738753,0.712994756769443,0.632073515871632,1.05418608574999,3.09406629744561,1.02131881726136,2.70091641046965,1.55230420539305,3.00071849044229,1.06404140185364,1.42695054081656,1.97458824722545,3.95804433848979,0.704015124191131,1.90648863777438,1.32317038832977,0.98931751764888,1.77610869365496,1.74907482291652,2.14870219205646,2.29797259643086,1.45740418314925,1.66882771809459,1.53783792718067,1.65109494370578,1.66675074632741,1.69531611304222,1.23024804948923,1.37266903923914,2.20971958992012,1.25956307091292,1.24379976423981,1.90934123603023,3.16335993581135,1.21991680276109,1.83609079397062,1.25452977608681,0.655087691238533,1.34864346384821,1.73572257023205,1.30877970992015,2.07383957266869,0.621339313086926,0.5636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| |||
|short_description=p2@Tbcd | |||
}} |
Revision as of 19:10, 12 September 2013
Short description: | p2@Tbcd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tbcd_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENSMUST00000103013, NM_029878, uc007mvy.2_5end |
EntrezGene: | Tbcd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 6.64e-08 | 92 |
neurectoderm | 9.98e-07 | 64 |
neural plate | 9.98e-07 | 64 |
presumptive neural plate | 9.98e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.