FFCP PHASE1:Mm9::chr5:34868446..34868518,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=24055|HGNC=|MCL_coexpression_id=718|UniProt=Q5U3L0,D3Z107|association_with_transcript=0bp_to_ENSMUST00000067638,ENSMUST00000125817_5end|description=CAGE_peak_1_at_Sh3bp2_5end|id=chr5:34868446..34868518,+|ontology_enrichment_celltype=CL:0002320!1.41e-07!46;CL:0000134!1.41e-07!46;CL:0002031!2.55e-07!25;CL:0000219!2.58e-07!54;CL:0000063!2.96e-07!66|ontology_enrichment_celltype_v019_2=CL:0002320,8.21e-08,46;CL:0000134,8.21e-08,46;CL:0000219,1.20e-07,54;CL:0002031,1.30e-07,25;CL:0000988,7.59e-07,32;CL:0002032,7.59e-07,32;CL:0000037,7.59e-07,32;CL:0000837,7.59e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!4.21e-15!70;UBERON:0002193!1.53e-09!48;UBERON:0002390!3.05e-08!45;UBERON:0003061!3.05e-08!45;UBERON:0005057!5.36e-08!51;UBERON:0002384!1.41e-07!46;UBERON:0000490!1.91e-07!66;UBERON:0005256!2.20e-07!47;UBERON:0000926!3.76e-07!193;UBERON:0004120!3.76e-07!193;UBERON:0006603!3.76e-07!193;UBERON:0002204!4.09e-07!32;UBERON:0003929!4.41e-07!55;UBERON:0002365!4.50e-07!25;UBERON:0002330!4.50e-07!25;UBERON:0002371!5.16e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.21e-10,48;UBERON:0002405,9.21e-10,48;UBERON:0005256,7.93e-09,45;UBERON:0002390,1.93e-08,45;UBERON:0003061,1.93e-08,45;UBERON:0002384,8.21e-08,46;UBERON:0000490,8.38e-08,66;UBERON:0003929,2.40e-07,55;UBERON:0002204,2.60e-07,32;UBERON:0002365,3.84e-07,25;UBERON:0002330,3.84e-07,25;UBERON:0002371,4.42e-07,16|phase1_expression=0,45.3668029931169,40.9499315450582,12.40103266358,12.0214975187123,9.40123922706583,10.0453435456076,5.81054955487093,61.243094135975,69.5171643176321,38.8664787871896,30.6325090542092,5.9920255475922,4.37102012094987,6.99530499812892,10.1237633694913,2.09868563438444,31.861678701182,32.2218918973486,25.0389894560838,5.10259740906419,0.297872853602656,1.56719873483361,11.9994317095055,12.8469197397615,32.1569899904411,29.2918157388171,21.1161808032171,10.4512880701006,7.81293402255785,12.4169085966971,17.7808588568697,7.99584223859941,0,0.288851619751275,0.332469290716985,0.408338712524738,18.4153917524239,8.5946887897618,14.1351410872926,22.9410280332096,19.1252735788365,20.8769451803396,2.7697299954627,2.93993100536592,0.550640256485045,1.56478268869608,2.18025156380447,3.07560655828261,4.47188767870852,1.67983705950435,0,30.536434302508,5.07753499407941,4.36921938885203,16.9791227783725,14.8997388768154,6.18806510732931,0.606949382578793,0,3.80298842103708,1.35537812827653,0.889294796111139,66.5925790788235,85.0425071807598,68.2060910348256,35.0532129306534,18.4424786554346,0.207379224616955,0.270011876663381,0.210324961351382,0.571301968807607,0.662605622854841,0,0,0,3.30347642998166,2.80912143787413,2.30409799884365,0.131886287730194,0.182975287204819,0.52091337055676,2.51264699101243,1.12552522006336,2.13917546887534,1.76777151284201,1.13897344639282,0.186399445825301,32.10790597327,26.9034753980156,2.6087803983151,7.74381489283248,76.1567893752681,17.810205324048,27.9403859502498,12.5447528387254,10.3928870897496,0.340860645156116,1.03914401841148,1.06001872353102,0.422530259330042,0,5.09610479413291,0,3.030874574157,4.56047757855178,3.0331466700887,8.90634261808668,48.4213842420211,8.60964406575984,1.04091196059682,2.13125834818499,6.22661842591358,4.52167921657868,4.8211369925639,5.27799683584637,1.97755974187499,7.80836527367523,12.3845477272982,3.88240439873782,6.8460870722722,9.21262980956922,0,1.46390398505774,0.83778682725382,4.08731288333746,4.91242010474273,3.59941638596045,3.55796635804581,1.19832511523858,1.37250180845588,0.502617408451458,1.91206752211504,1.27857728665165,1.24672826735736,3.0825839982874,2.64782346010822,7.46441823660558,11.3725241295154,4.20883711772948,0.130120442962704,0.689706313300419,0.900310649026746,0.60281927134286,0.816437989815934,0.768682321709099,0.749613796477831,1.55222022443409,0.431135985865684,0.189106080167819,0.351902248327898,0.43839146485515,0.278047249225598,3.48252166522167,3.90986059175093,0.796137067273973,3.51106593656617,3.08817488537658,2.55747149456033,1.24275463521301,1.40715635988658,1.08037236876609,0.946978942340841,0.590292695242212,0.617068451549513,0.930135779001631,1.60964040839772,1.28441876603886,1.15191894939436,0.656669856316381,2.02672023864639,2.33919979880532,3.51280184465681,2.81833479396781,1.68231958851302,1.23485534855141,1.65209391491899,3.96675849995316,0.213288250535234,0.928946687441754,1.03093969057675,1.21010114774006,0.667134131534611,1.90225626112559,6.64340686162316,3.45867804920423,1.75934646160189,2.98434708061726,1.36474860983384,7.19055526923377,4.10662294761919,3.38540164532424,1.51734320762465,1.14248512609729,2.25415471346161,1.83286195060783,0.969762435838129,1.1221731182451,0.948548056863859,1.18088118383682,1.255989822731,2.34454611451421,17.1942523710546,3.00321190288969,3.34150291692445,2.69834534861824,3.24576194221605,2.41177159752417,3.56476192493988,5.75392274901621,7.94462611197673,5.49122826376163,4.31304619582064,12.2806512730606,11.85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| ||
|EntrezGene=24055 | |||
|HGNC= | |||
|MCL_coexpression_id=718 | |||
|UniProt=Q5U3L0,D3Z107 | |||
|association_with_transcript=0bp_to_ENSMUST00000067638,ENSMUST00000125817_5end | |||
|description=CAGE_peak_1_at_Sh3bp2_5end | |||
|id=chr5:34868446..34868518,+ | |||
|ontology_enrichment_celltype=CL:0002320!1.41e-07!46;CL:0000134!1.41e-07!46;CL:0002031!2.55e-07!25;CL:0000219!2.58e-07!54;CL:0000063!2.96e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,8.21e-08,46;CL:0000134,8.21e-08,46;CL:0000219,1.20e-07,54;CL:0002031,1.30e-07,25;CL:0000988,7.59e-07,32;CL:0002032,7.59e-07,32;CL:0000037,7.59e-07,32;CL:0000837,7.59e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.21e-15!70;UBERON:0002193!1.53e-09!48;UBERON:0002390!3.05e-08!45;UBERON:0003061!3.05e-08!45;UBERON:0005057!5.36e-08!51;UBERON:0002384!1.41e-07!46;UBERON:0000490!1.91e-07!66;UBERON:0005256!2.20e-07!47;UBERON:0000926!3.76e-07!193;UBERON:0004120!3.76e-07!193;UBERON:0006603!3.76e-07!193;UBERON:0002204!4.09e-07!32;UBERON:0003929!4.41e-07!55;UBERON:0002365!4.50e-07!25;UBERON:0002330!4.50e-07!25;UBERON:0002371!5.16e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.21e-10,48;UBERON:0002405,9.21e-10,48;UBERON:0005256,7.93e-09,45;UBERON:0002390,1.93e-08,45;UBERON:0003061,1.93e-08,45;UBERON:0002384,8.21e-08,46;UBERON:0000490,8.38e-08,66;UBERON:0003929,2.40e-07,55;UBERON:0002204,2.60e-07,32;UBERON:0002365,3.84e-07,25;UBERON:0002330,3.84e-07,25;UBERON:0002371,4.42e-07,16 | |||
|phase1_expression=0,45.3668029931169,40.9499315450582,12.40103266358,12.0214975187123,9.40123922706583,10.0453435456076,5.81054955487093,61.243094135975,69.5171643176321,38.8664787871896,30.6325090542092,5.9920255475922,4.37102012094987,6.99530499812892,10.1237633694913,2.09868563438444,31.861678701182,32.2218918973486,25.0389894560838,5.10259740906419,0.297872853602656,1.56719873483361,11.9994317095055,12.8469197397615,32.1569899904411,29.2918157388171,21.1161808032171,10.4512880701006,7.81293402255785,12.4169085966971,17.7808588568697,7.99584223859941,0,0.288851619751275,0.332469290716985,0.408338712524738,18.4153917524239,8.5946887897618,14.1351410872926,22.9410280332096,19.1252735788365,20.8769451803396,2.7697299954627,2.93993100536592,0.550640256485045,1.56478268869608,2.18025156380447,3.07560655828261,4.47188767870852,1.67983705950435,0,30.536434302508,5.07753499407941,4.36921938885203,16.9791227783725,14.8997388768154,6.18806510732931,0.606949382578793,0,3.80298842103708,1.35537812827653,0.889294796111139,66.5925790788235,85.0425071807598,68.2060910348256,35.0532129306534,18.4424786554346,0.207379224616955,0.270011876663381,0.210324961351382,0.571301968807607,0.662605622854841,0,0,0,3.30347642998166,2.80912143787413,2.30409799884365,0.131886287730194,0.182975287204819,0.52091337055676,2.51264699101243,1.12552522006336,2.13917546887534,1.76777151284201,1.13897344639282,0.186399445825301,32.10790597327,26.9034753980156,2.6087803983151,7.74381489283248,76.1567893752681,17.810205324048,27.9403859502498,12.5447528387254,10.3928870897496,0.340860645156116,1.03914401841148,1.06001872353102,0.422530259330042,0,5.09610479413291,0,3.030874574157,4.56047757855178,3.0331466700887,8.90634261808668,48.4213842420211,8.60964406575984,1.04091196059682,2.13125834818499,6.22661842591358,4.52167921657868,4.8211369925639,5.27799683584637,1.97755974187499,7.80836527367523,12.3845477272982,3.88240439873782,6.8460870722722,9.21262980956922,0,1.46390398505774,0.83778682725382,4.08731288333746,4.91242010474273,3.59941638596045,3.55796635804581,1.19832511523858,1.37250180845588,0.502617408451458,1.91206752211504,1.27857728665165,1.24672826735736,3.0825839982874,2.64782346010822,7.46441823660558,11.3725241295154,4.20883711772948,0.130120442962704,0.689706313300419,0.900310649026746,0.60281927134286,0.816437989815934,0.768682321709099,0.749613796477831,1.55222022443409,0.431135985865684,0.189106080167819,0.351902248327898,0.43839146485515,0.278047249225598,3.48252166522167,3.90986059175093,0.796137067273973,3.51106593656617,3.08817488537658,2.55747149456033,1.24275463521301,1.40715635988658,1.08037236876609,0.946978942340841,0.590292695242212,0.617068451549513,0.930135779001631,1.60964040839772,1.28441876603886,1.15191894939436,0.656669856316381,2.02672023864639,2.33919979880532,3.51280184465681,2.81833479396781,1.68231958851302,1.23485534855141,1.65209391491899,3.96675849995316,0.213288250535234,0.928946687441754,1.03093969057675,1.21010114774006,0.667134131534611,1.90225626112559,6.64340686162316,3.45867804920423,1.75934646160189,2.98434708061726,1.36474860983384,7.19055526923377,4.10662294761919,3.38540164532424,1.51734320762465,1.14248512609729,2.25415471346161,1.83286195060783,0.969762435838129,1.1221731182451,0.948548056863859,1.18088118383682,1.255989822731,2.34454611451421,17.1942523710546,3.00321190288969,3.34150291692445,2.69834534861824,3.24576194221605,2.41177159752417,3.56476192493988,5.75392274901621,7.94462611197673,5.49122826376163,4.31304619582064,12.2806512730606,11.8574315783533,13.8918382870911,14.1723956682311,14.473305640901,7.7596339869974,0.37898282354097,0.651859905768103,0.509235257325564,0.234690248288502,1.50755631697634,3.09456733151818,4.48807390072937,1.7339865851681,3.32197034473162,1.2756381492599,2.78567635016755,6.73471429276993,5.35201516751593,69.3639906120652,60.3735309038768,14.2611639175521,11.0374698521893,2.0871576698413,4.68846746368813,0.655739781506702,2.01976741763498,1.26203287766503,1.56175497718655,1.07711698866399,2.62865677747807,4.01037613348309,6.22768367735431,1.61924280669958,2.04579100537918,1.58115111178609,1.92792789853084,7.38088443082997,1.95872164033981,1.95464351224291,6.10389454998381,3.98235415019888,0.485561272309963,0,0.188605079755898,0.885905678642318,1.84461088766356,3.35956781118687,1.45413491791002,1.42598951353889,3.16036757935816,1.05418608574999,3.09406629744561,0,0.36012218806262,0.517434735131018,0.428674070063185,1.06404140185364,1.07021290561242,0.329098041204242,1.2178597964584,3.28540391289194,1.48282449604674,1.98475558249466,12.366468970611,4.03661066739764,3.73940134554566,3.46179797609096,2.46211349617592,5.24665505933731,3.70850604021019,11.619219894254,2.88941615148511,4.25947412950337,5.08594833912666,8.20165366326151,12.5827995263587,12.4084253895514,8.39708713941948,9.39759821870082,0.954670618015114,0.949007980743406,1.42323626988794,0.972048067396211,1.46361807210128,1.31017538247707,2.56242258131159,3.63675205191478,3.14107130380836,2.07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| |||
|short_description=p1@Sh3bp2 | |||
}} |
Revision as of 07:31, 14 September 2013
Short description: | p1@Sh3bp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sh3bp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:718 |
Association with transcript: | 0bp_to_ENSMUST00000067638, ENSMUST00000125817_5end |
EntrezGene: | Sh3bp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 8.21e-08 | 46 |
mesenchymal cell | 8.21e-08 | 46 |
motile cell | 1.20e-07 | 54 |
hematopoietic lineage restricted progenitor cell | 1.30e-07 | 25 |
hematopoietic cell | 7.59e-07 | 32 |
hematopoietic oligopotent progenitor cell | 7.59e-07 | 32 |
hematopoietic stem cell | 7.59e-07 | 32 |
hematopoietic multipotent progenitor cell | 7.59e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.21e-10 | 48 |
immune system | 9.21e-10 | 48 |
trunk mesenchyme | 7.93e-09 | 45 |
hematopoietic system | 1.93e-08 | 45 |
blood island | 1.93e-08 | 45 |
connective tissue | 8.21e-08 | 46 |
unilaminar epithelium | 8.38e-08 | 66 |
gut epithelium | 2.40e-07 | 55 |
musculoskeletal system | 2.60e-07 | 32 |
exocrine gland | 3.84e-07 | 25 |
exocrine system | 3.84e-07 | 25 |
bone marrow | 4.42e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.