FFCP PHASE1:Mm9::chr4:33334548..33334574,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=108767|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000155616_5end|description=CAGE_peak_3_at_Pnrc1_5end|id=chr4:33334548..33334574,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000490!1.55e-08!66;UBERON:0003929!1.19e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0000490,3.26e-08,66;UBERON:0003929,1.56e-07,55|phase1_expression=6.24580503708696,42.2260243243627,36.3999391511629,11.7961042409664,12.0214975187123,9.9048770428015,9.34450562382103,29.6983643915625,7.03943610758334,7.2560003159818,3.76679530096111,1.83475965689274,19.0032810223638,19.5821701418554,0.333109761815663,0.809901069559304,0,2.05050407482854,1.7824876368746,2.54633791078818,1.10556277196391,0.794327609607082,1.30599894569468,11.0394771727451,18.1233332043064,22.3950466004858,18.0920038386811,16.8067561494993,1.90023419456374,1.76421090831952,9.3126814475228,1.27006134691926,4.30545351309199,0,1.73310971850765,1.16364251750945,1.42918549383658,1.25559489221072,0.7813353445238,3.66466620781659,15.2940186888064,8.19654581950135,3.88408282424923,1.51076181570693,2.53442328048786,4.58866880404204,0,0.65407546914134,0,0,0.279972843250725,0,7.04686945442493,17.4086914082723,7.73015738027667,0.514518872071894,0.573066879877513,3.6097046459421,0.202316460859598,0.528990979272033,1.26766280701236,2.03306719241479,0.889294796111139,0.899899717281399,0,1.4209602298922,0.299600110518405,0,0.103689612308478,0.135005938331691,0.210324961351382,0.856952953211411,0.883474163806454,0.244981598429908,0.383381884072945,0,0,0.383062014255563,0,0.131886287730194,0.365950574409639,0,0.279182999001381,0,0,0.294628585473668,0.284743361598206,0.745597783301202,0.454357159999104,0.529000920747499,9.27566363845369,1.72084775396277,0.679971333707751,2.69851595818909,1.94932925234301,0.448026887097336,0,0,0.259786004602869,0.35333957451034,9.57735254481427,1.28326477414318,2.54805239706646,0,1.5154372870785,2.02687892380079,2.02209778005913,1.48439043634778,2.58937883647172,0.890652834388949,1.56136794089522,2.74018930480927,1.61430848079241,1.95939432718409,1.29347577849275,1.25666591329675,1.97755974187499,0.144599356919912,0,0.970601099684455,0,0,1.86391761218122,0.292780797011547,0.209446706813455,2.29911349687732,9.94465533399138,9.59844369589452,4.57452817463033,0.449371918214468,1.37250180845588,1.25654352112864,0.347648640384553,0,0.20778804455956,0.973447578406546,0.712875546952214,1.36847667671102,4.80173241023982,1.47309299120532,1.82168620147785,1.83921683546778,1.0803727788321,1.50704817835715,0.884474488967262,2.0498195245576,1.59292931751539,4.65666067330228,0,1.70195472151037,1.05570674498369,0.876782929710299,1.66828349535359,0.696504333044333,1.85203922767149,0.995171334092466,5.61770549850588,4.11756651383544,1.98914449576915,4.34964122324554,2.11073453982987,2.52086886045421,2.3674473558521,3.54175617145327,3.08534225774756,3.25547522650571,2.68273401399619,1.5179494507732,3.62031669809657,1.64167464079095,0.486412857275134,0.730999937126662,0.219550115291051,0.134206418760372,0.210289948564127,0.308713837137853,3.96502539580558,1.05780226665418,0.639864751605702,1.62565670302307,0.644337306610467,1.4117846723634,2.2237804384487,2.09248188723815,1.42358718463353,1.64698954724011,10.304743560811,15.1206918751275,15.4021628824105,0,1.08069024937347,2.19055400579804,0.758671603812327,1.5994791765362,0,1.22190796707189,1.16371492300575,1.19230893813542,2.15004226222475,0.885660887877613,1.56998727841375,2.59134044235781,0.296452627087149,1.83529616287703,0.589676985339609,0.899448449539415,2.02860121388503,1.68824011826692,5.34714288740982,2.5892652370573,3.40483976227574,6.58947391651396,7.18841032636773,8.55924179637558,10.2972432127805,5.55673531483646,2.69096120282868,22.6748455040783,0.184753190166605,1.32643988239339,1.14075483509418,0.678980343100753,0.704070744865506,1.17254380209271,0,0.195133647857799,0.788175720530955,0.664394068946325,0.637819074629948,0.163863314715738,1.03610989119537,0.289298117163023,1.50791283939272,2.17562273527484,0.491764273019036,0.275936746304732,0.321101179975584,0.468846746368813,0,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0.222798674082394,1.13230612315533,0.404810701674894,0.292255857911312,0,0.963963949265421,1.27746076687442,1.78065603667255,1.14020871547503,0.494910368917606,0,1.69946445308487,0.302323556964751,1.13163047853539,0.885905678642318,1.53717573971964,3.87642439752332,1.45413491791002,1.06949213515416,0.632073515871632,1.05418608574999,0,8.17055053809091,2.16073312837572,0.776152102696527,2.14337035031592,5.14286677562593,2.14042581122485,3.78462747384878,0.304464949114599,1.64270195644597,1.0591603543191,0.882113592219848,1.15420377059036,1.13025098687134,1.14594557363496,0.596861720015682,0.820704498725306,4.95517422270746,0.741701208042039,0.512612642393558,0.619160603889667,0.55558358210913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| ||
|EntrezGene=108767 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000155616_5end | |||
|description=CAGE_peak_3_at_Pnrc1_5end | |||
|id=chr4:33334548..33334574,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!1.55e-08!66;UBERON:0003929!1.19e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,3.26e-08,66;UBERON:0003929,1.56e-07,55 | |||
|phase1_expression=6.24580503708696,42.2260243243627,36.3999391511629,11.7961042409664,12.0214975187123,9.9048770428015,9.34450562382103,29.6983643915625,7.03943610758334,7.2560003159818,3.76679530096111,1.83475965689274,19.0032810223638,19.5821701418554,0.333109761815663,0.809901069559304,0,2.05050407482854,1.7824876368746,2.54633791078818,1.10556277196391,0.794327609607082,1.30599894569468,11.0394771727451,18.1233332043064,22.3950466004858,18.0920038386811,16.8067561494993,1.90023419456374,1.76421090831952,9.3126814475228,1.27006134691926,4.30545351309199,0,1.73310971850765,1.16364251750945,1.42918549383658,1.25559489221072,0.7813353445238,3.66466620781659,15.2940186888064,8.19654581950135,3.88408282424923,1.51076181570693,2.53442328048786,4.58866880404204,0,0.65407546914134,0,0,0.279972843250725,0,7.04686945442493,17.4086914082723,7.73015738027667,0.514518872071894,0.573066879877513,3.6097046459421,0.202316460859598,0.528990979272033,1.26766280701236,2.03306719241479,0.889294796111139,0.899899717281399,0,1.4209602298922,0.299600110518405,0,0.103689612308478,0.135005938331691,0.210324961351382,0.856952953211411,0.883474163806454,0.244981598429908,0.383381884072945,0,0,0.383062014255563,0,0.131886287730194,0.365950574409639,0,0.279182999001381,0,0,0.294628585473668,0.284743361598206,0.745597783301202,0.454357159999104,0.529000920747499,9.27566363845369,1.72084775396277,0.679971333707751,2.69851595818909,1.94932925234301,0.448026887097336,0,0,0.259786004602869,0.35333957451034,9.57735254481427,1.28326477414318,2.54805239706646,0,1.5154372870785,2.02687892380079,2.02209778005913,1.48439043634778,2.58937883647172,0.890652834388949,1.56136794089522,2.74018930480927,1.61430848079241,1.95939432718409,1.29347577849275,1.25666591329675,1.97755974187499,0.144599356919912,0,0.970601099684455,0,0,1.86391761218122,0.292780797011547,0.209446706813455,2.29911349687732,9.94465533399138,9.59844369589452,4.57452817463033,0.449371918214468,1.37250180845588,1.25654352112864,0.347648640384553,0,0.20778804455956,0.973447578406546,0.712875546952214,1.36847667671102,4.80173241023982,1.47309299120532,1.82168620147785,1.83921683546778,1.0803727788321,1.50704817835715,0.884474488967262,2.0498195245576,1.59292931751539,4.65666067330228,0,1.70195472151037,1.05570674498369,0.876782929710299,1.66828349535359,0.696504333044333,1.85203922767149,0.995171334092466,5.61770549850588,4.11756651383544,1.98914449576915,4.34964122324554,2.11073453982987,2.52086886045421,2.3674473558521,3.54175617145327,3.08534225774756,3.25547522650571,2.68273401399619,1.5179494507732,3.62031669809657,1.64167464079095,0.486412857275134,0.730999937126662,0.219550115291051,0.134206418760372,0.210289948564127,0.308713837137853,3.96502539580558,1.05780226665418,0.639864751605702,1.62565670302307,0.644337306610467,1.4117846723634,2.2237804384487,2.09248188723815,1.42358718463353,1.64698954724011,10.304743560811,15.1206918751275,15.4021628824105,0,1.08069024937347,2.19055400579804,0.758671603812327,1.5994791765362,0,1.22190796707189,1.16371492300575,1.19230893813542,2.15004226222475,0.885660887877613,1.56998727841375,2.59134044235781,0.296452627087149,1.83529616287703,0.589676985339609,0.899448449539415,2.02860121388503,1.68824011826692,5.34714288740982,2.5892652370573,3.40483976227574,6.58947391651396,7.18841032636773,8.55924179637558,10.2972432127805,5.55673531483646,2.69096120282868,22.6748455040783,0.184753190166605,1.32643988239339,1.14075483509418,0.678980343100753,0.704070744865506,1.17254380209271,0,0.195133647857799,0.788175720530955,0.664394068946325,0.637819074629948,0.163863314715738,1.03610989119537,0.289298117163023,1.50791283939272,2.17562273527484,0.491764273019036,0.275936746304732,0.321101179975584,0.468846746368813,0,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0.222798674082394,1.13230612315533,0.404810701674894,0.292255857911312,0,0.963963949265421,1.27746076687442,1.78065603667255,1.14020871547503,0.494910368917606,0,1.69946445308487,0.302323556964751,1.13163047853539,0.885905678642318,1.53717573971964,3.87642439752332,1.45413491791002,1.06949213515416,0.632073515871632,1.05418608574999,0,8.17055053809091,2.16073312837572,0.776152102696527,2.14337035031592,5.14286677562593,2.14042581122485,3.78462747384878,0.304464949114599,1.64270195644597,1.0591603543191,0.882113592219848,1.15420377059036,1.13025098687134,1.14594557363496,0.596861720015682,0.820704498725306,4.95517422270746,0.741701208042039,0.512612642393558,0.619160603889667,0.555583582109135,0.565105371014073,0.410082683163076,1.14389086603261,20.3974115992626,21.692475110167,18.1041965683795,0.954670618015114,0.790839983952838,2.03319467126849,2.16010681643603,0.836353184057875,1.31017538247707,0.944050424693745,2.14898984885873,0.785267825952089,0.777689839750757,0.621339313086926,3.94585057078933,0.747582730219894,0.827292452285488,1.16670713006429,1.16243841129958,1.520605129417,1.99507305697782,1.95306577265925,0.419437377702843,4.34851417486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| |||
|short_description=p3@Pnrc1 | |||
}} | |||
Revision as of 04:52, 14 September 2013
| Short description: | p3@Pnrc1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Pnrc1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000155616_5end |
| EntrezGene: | Pnrc1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| unilaminar epithelium | 3.26e-08 | 66 |
| gut epithelium | 1.56e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
