FFCP PHASE1:Mm9::chr11:103799525..103799531,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18195|HGNC=|MCL_coexpression_id=1492|UniProt=G3UX86,G3UX98|association_with_transcript=0bp_to_ENSMUST00000133774,ENSMUST00000149642_5end|description=CAGE_peak_5_at_Nsf_5end|id=chr11:103799525..103799531,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000992!4.53e-15!3;UBERON:0003134!8.11e-10!8;UBERON:0000474!9.78e-09!9;UBERON:0005631!3.01e-07!3;UBERON:0000478!3.01e-07!3;UBERON:0000158!3.01e-07!3;UBERON:0003100!3.69e-07!11;UBERON:0002323!6.05e-07!37;UBERON:0004458!6.05e-07!37;UBERON:0004871!6.41e-07!3;UBERON:0003886!9.84e-07!38|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.74e-24,3;UBERON:0005631,8.72e-24,3;UBERON:0000478,8.72e-24,3;UBERON:0000158,8.72e-24,3;UBERON:0003134,1.78e-20,8;UBERON:0000305,2.59e-18,1;UBERON:0000474,2.63e-18,9;UBERON:0003100,3.83e-15,11;UBERON:0001987,6.19e-10,2;UBERON:0003124,6.19e-10,2;UBERON:0004340,6.19e-10,2;UBERON:0003133,2.29e-07,24;UBERON:0004871,5.46e-07,3;UBERON:0005156,7.46e-07,26;UBERON:0000990,7.46e-07,26|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714130922658041,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40656204499845,0.890328018336276,1.79175655288934,0,0,0,0,1.32023555829129,0.295301892880773,0.614870295887855,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,1.27099242518292,0,0,0,0,0.358117032009409,0.656563598980245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p5@Nsf}} | ||
|EntrezGene=18195 | |||
|HGNC= | |||
|MCL_coexpression_id=1492 | |||
|UniProt=G3UX86,G3UX98 | |||
|association_with_transcript=0bp_to_ENSMUST00000133774,ENSMUST00000149642_5end | |||
|description=CAGE_peak_5_at_Nsf_5end | |||
|id=chr11:103799525..103799531,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000992!4.53e-15!3;UBERON:0003134!8.11e-10!8;UBERON:0000474!9.78e-09!9;UBERON:0005631!3.01e-07!3;UBERON:0000478!3.01e-07!3;UBERON:0000158!3.01e-07!3;UBERON:0003100!3.69e-07!11;UBERON:0002323!6.05e-07!37;UBERON:0004458!6.05e-07!37;UBERON:0004871!6.41e-07!3;UBERON:0003886!9.84e-07!38 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.74e-24,3;UBERON:0005631,8.72e-24,3;UBERON:0000478,8.72e-24,3;UBERON:0000158,8.72e-24,3;UBERON:0003134,1.78e-20,8;UBERON:0000305,2.59e-18,1;UBERON:0000474,2.63e-18,9;UBERON:0003100,3.83e-15,11;UBERON:0001987,6.19e-10,2;UBERON:0003124,6.19e-10,2;UBERON:0004340,6.19e-10,2;UBERON:0003133,2.29e-07,24;UBERON:0004871,5.46e-07,3;UBERON:0005156,7.46e-07,26;UBERON:0000990,7.46e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714130922658041,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40656204499845,0.890328018336276,1.79175655288934,0,0,0,0,1.32023555829129,0.295301892880773,0.614870295887855,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,1.27099242518292,0,0,0,0,0.358117032009409,0.656563598980245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p5@Nsf | |||
}} |
Revision as of 18:26, 12 September 2013
Short description: | p5@Nsf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nsf_5end |
Coexpression cluster: | MCL_coexpression_mm9:1492 |
Association with transcript: | 0bp_to_ENSMUST00000133774, ENSMUST00000149642_5end |
EntrezGene: | Nsf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
female gonad | 1.74e-24 | 3 |
extraembryonic membrane | 8.72e-24 | 3 |
extraembryonic structure | 8.72e-24 | 3 |
membranous layer | 8.72e-24 | 3 |
female reproductive organ | 1.78e-20 | 8 |
amnion | 2.59e-18 | 1 |
female reproductive system | 2.63e-18 | 9 |
female organism | 3.83e-15 | 11 |
placenta | 6.19e-10 | 2 |
chorion | 6.19e-10 | 2 |
allantois | 6.19e-10 | 2 |
reproductive organ | 2.29e-07 | 24 |
somatic layer of lateral plate mesoderm | 5.46e-07 | 3 |
reproductive structure | 7.46e-07 | 26 |
reproductive system | 7.46e-07 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.