FFCP PHASE1:Mm9::chr11:98487658..98487663,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=450219|HGNC=|MCL_coexpression_id=91|UniProt=Q5Y4Y6,B7ZC14|association_with_transcript=-10bp_to_ENSMUST00000073295,ENSMUST00000107508,NM_001007461,uc007lgs.1_5end|description=CAGE_peak_1_at_Gsdma3_5end|id=chr11:98487658..98487663,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!6.37e-21!5;UBERON:0001003!6.37e-21!5;UBERON:0002097!6.37e-21!5;UBERON:0002199!6.37e-21!5;UBERON:0007029!6.37e-21!5;UBERON:0007376!6.37e-21!5;UBERON:0002416!6.37e-21!5;UBERON:0007383!6.37e-21!5;UBERON:0002370!8.73e-13!23;UBERON:0000974!8.73e-13!23;UBERON:0004807!8.73e-13!23;UBERON:0005058!8.73e-13!23;UBERON:0003351!8.73e-13!23;UBERON:0009113!8.73e-13!23;UBERON:0003295!8.73e-13!23;UBERON:0009722!8.73e-13!23;UBERON:0005562!8.73e-13!23;UBERON:0007690!8.73e-13!23;UBERON:0006562!3.13e-12!24;UBERON:0003408!3.13e-12!24;UBERON:0001557!3.13e-12!24;UBERON:0001042!3.13e-12!24;UBERON:0008814!3.13e-12!24;UBERON:0009145!3.13e-12!24;UBERON:0000072!8.19e-11!27;UBERON:0004177!4.98e-10!29;UBERON:0000063!3.27e-08!35;UBERON:0000065!6.35e-07!41;UBERON:0001004!9.60e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.42e-35,5;UBERON:0001003,1.42e-35,5;UBERON:0002097,1.42e-35,5;UBERON:0002199,1.42e-35,5;UBERON:0007029,1.42e-35,5;UBERON:0007376,1.42e-35,5;UBERON:0002416,1.42e-35,5;UBERON:0007383,1.42e-35,5;UBERON:0003102,3.83e-09,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.76033637060068,0,0.120625849856312,0.238744688006273,2.29797259643086,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0,0.228620419965,0,0.292373642219257,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Gsdma3}} | ||
|EntrezGene=450219 | |||
|HGNC= | |||
|MCL_coexpression_id=91 | |||
|UniProt=Q5Y4Y6,B7ZC14 | |||
|association_with_transcript=-10bp_to_ENSMUST00000073295,ENSMUST00000107508,NM_001007461,uc007lgs.1_5end | |||
|description=CAGE_peak_1_at_Gsdma3_5end | |||
|id=chr11:98487658..98487663,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!6.37e-21!5;UBERON:0001003!6.37e-21!5;UBERON:0002097!6.37e-21!5;UBERON:0002199!6.37e-21!5;UBERON:0007029!6.37e-21!5;UBERON:0007376!6.37e-21!5;UBERON:0002416!6.37e-21!5;UBERON:0007383!6.37e-21!5;UBERON:0002370!8.73e-13!23;UBERON:0000974!8.73e-13!23;UBERON:0004807!8.73e-13!23;UBERON:0005058!8.73e-13!23;UBERON:0003351!8.73e-13!23;UBERON:0009113!8.73e-13!23;UBERON:0003295!8.73e-13!23;UBERON:0009722!8.73e-13!23;UBERON:0005562!8.73e-13!23;UBERON:0007690!8.73e-13!23;UBERON:0006562!3.13e-12!24;UBERON:0003408!3.13e-12!24;UBERON:0001557!3.13e-12!24;UBERON:0001042!3.13e-12!24;UBERON:0008814!3.13e-12!24;UBERON:0009145!3.13e-12!24;UBERON:0000072!8.19e-11!27;UBERON:0004177!4.98e-10!29;UBERON:0000063!3.27e-08!35;UBERON:0000065!6.35e-07!41;UBERON:0001004!9.60e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.42e-35,5;UBERON:0001003,1.42e-35,5;UBERON:0002097,1.42e-35,5;UBERON:0002199,1.42e-35,5;UBERON:0007029,1.42e-35,5;UBERON:0007376,1.42e-35,5;UBERON:0002416,1.42e-35,5;UBERON:0007383,1.42e-35,5;UBERON:0003102,3.83e-09,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.76033637060068,0,0.120625849856312,0.238744688006273,2.29797259643086,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0,0.228620419965,0,0.292373642219257,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Gsdma3 | |||
}} |
Revision as of 21:49, 12 September 2013
Short description: | p1@Gsdma3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gsdma3_5end |
Coexpression cluster: | MCL_coexpression_mm9:91 |
Association with transcript: | -10bp_to_ENSMUST00000073295, ENSMUST00000107508, NM_001007461, uc007lgs.1_5end |
EntrezGene: | Gsdma3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.42e-35 | 5 |
skin epidermis | 1.42e-35 | 5 |
skin of body | 1.42e-35 | 5 |
integument | 1.42e-35 | 5 |
surface | 1.42e-35 | 5 |
outer epithelium | 1.42e-35 | 5 |
integumental system | 1.42e-35 | 5 |
enveloping layer of ectoderm | 1.42e-35 | 5 |
surface structure | 3.83e-09 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.