FFCP PHASE1:Mm9::chr2:135833078..135833092,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18798|HGNC=|UniProt=|association_with_transcript=112bp_to_ENSMUST00000147122_5end|description=CAGE_peak_10_at_Plcb4_5end|id=chr2:135833078..135833092,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,2.65e-13,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.23e-15,54;UBERON:0004684,2.65e-13,3;UBERON:0002275,2.65e-13,3;UBERON:0001017,8.03e-12,73;UBERON:0001016,1.98e-11,75;UBERON:0001049,3.31e-11,52;UBERON:0005068,3.31e-11,52;UBERON:0006241,3.31e-11,52;UBERON:0007135,3.31e-11,52;UBERON:0002021,1.84e-10,10;UBERON:0000411,1.84e-10,10;UBERON:0001950,1.84e-10,10;UBERON:0004121,1.05e-09,95;UBERON:0000924,1.05e-09,95;UBERON:0006601,1.05e-09,95;UBERON:0002346,1.12e-08,64;UBERON:0003075,1.12e-08,64;UBERON:0007284,1.12e-08,64;UBERON:0003076,2.92e-08,12;UBERON:0003057,2.92e-08,12;UBERON:0002616,1.53e-07,46;UBERON:0010314,1.86e-07,92;UBERON:0000955,2.40e-07,47;UBERON:0006238,2.40e-07,47;UBERON:0010371,2.53e-07,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.837063261473815,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0.207379224616955,0,0,0,0,0.122490799214954,0,0,1.10115880999389,2.80912143787413,4.30098293117482,0,0.182975287204819,0,0,0,1.68078072554491,1.17851434189467,1.13897344639282,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0.35333957451034,0,0,0,0,0,0.506719730950197,0,0,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.587943535678524,0.251333182659351,0,0,0.884610551949874,0,0,0,0,2.34224637609238,1.25668024088073,0,0,0,0,1.3481157546434,0,0,0,0.767146371990992,1.87009240103604,0.486723789203273,0.203678727700633,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,0.150704817835715,0.408218994907967,0.512454881139399,0.374806898238915,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0.257347907114715,0,0.414251545071004,0,0.720248245844059,0,0,0.154267112887378,1.16266972375204,0,1.63471479314037,0.822799249567402,0.985004784474571,0.405344047729279,0.292399974850665,0.878200461164203,0.402619256281115,0.210289948564127,0.205809224758569,0,0,0,0.232236671860439,0,0,0,0,1.42358718463353,0,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0.581857461502877,0.210407459670956,0.316182685621286,0.738050739898011,0.470996183524124,0.370191491765402,0,0,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.975668239288994,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0.863424909329478,0.433947175744535,0,0,0,0,0.642202359951168,0.468846746368813,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0.642642632843614,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0.18006109403131,0,0.214337035031592,0,0.356737635204141,0.329098041204242,0,0.23467170806371,0.21183207086382,0.441056796109924,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,1.29797711407357,0.170870880797853,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0.218362563746178,0.269728692769641,0,0.523511883968059,0.129614973291793,1.24267862617385,0.56369293868419,0,0,0,0,0.337912250981556,0.352071715937262,0.2604087696879,0.314578033277133,0.483168241652012,0,0,0,0,0.389762468933385,0,0,0.360586348559907,0,0.100966449948148,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0.269141569828427,0,0.772758376128762,0.187682475451182,0.183151624267265,0,0,1.12950368523413,2.30162618253588,0.572895513439397,0.68741272937475,2.05524755931193,3.7769694869485,0,0.900642406448441,2.26571204492102,0.51776031175182,0.415149390336707,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0,0,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.70990322463735,0.238436189947321,0,0.188218760830661,0.25384382367503,0.365855945745545,0,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p10@Plcb4}} | ||
|EntrezGene=18798 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=112bp_to_ENSMUST00000147122_5end | |||
|description=CAGE_peak_10_at_Plcb4_5end | |||
|id=chr2:135833078..135833092,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.65e-13,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.23e-15,54;UBERON:0004684,2.65e-13,3;UBERON:0002275,2.65e-13,3;UBERON:0001017,8.03e-12,73;UBERON:0001016,1.98e-11,75;UBERON:0001049,3.31e-11,52;UBERON:0005068,3.31e-11,52;UBERON:0006241,3.31e-11,52;UBERON:0007135,3.31e-11,52;UBERON:0002021,1.84e-10,10;UBERON:0000411,1.84e-10,10;UBERON:0001950,1.84e-10,10;UBERON:0004121,1.05e-09,95;UBERON:0000924,1.05e-09,95;UBERON:0006601,1.05e-09,95;UBERON:0002346,1.12e-08,64;UBERON:0003075,1.12e-08,64;UBERON:0007284,1.12e-08,64;UBERON:0003076,2.92e-08,12;UBERON:0003057,2.92e-08,12;UBERON:0002616,1.53e-07,46;UBERON:0010314,1.86e-07,92;UBERON:0000955,2.40e-07,47;UBERON:0006238,2.40e-07,47;UBERON:0010371,2.53e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.837063261473815,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0.207379224616955,0,0,0,0,0.122490799214954,0,0,1.10115880999389,2.80912143787413,4.30098293117482,0,0.182975287204819,0,0,0,1.68078072554491,1.17851434189467,1.13897344639282,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0.35333957451034,0,0,0,0,0,0.506719730950197,0,0,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.587943535678524,0.251333182659351,0,0,0.884610551949874,0,0,0,0,2.34224637609238,1.25668024088073,0,0,0,0,1.3481157546434,0,0,0,0.767146371990992,1.87009240103604,0.486723789203273,0.203678727700633,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,0.150704817835715,0.408218994907967,0.512454881139399,0.374806898238915,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0.257347907114715,0,0.414251545071004,0,0.720248245844059,0,0,0.154267112887378,1.16266972375204,0,1.63471479314037,0.822799249567402,0.985004784474571,0.405344047729279,0.292399974850665,0.878200461164203,0.402619256281115,0.210289948564127,0.205809224758569,0,0,0,0.232236671860439,0,0,0,0,1.42358718463353,0,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0.581857461502877,0.210407459670956,0.316182685621286,0.738050739898011,0.470996183524124,0.370191491765402,0,0,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.975668239288994,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0.863424909329478,0.433947175744535,0,0,0,0,0.642202359951168,0.468846746368813,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0.642642632843614,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0.18006109403131,0,0.214337035031592,0,0.356737635204141,0.329098041204242,0,0.23467170806371,0.21183207086382,0.441056796109924,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,1.29797711407357,0.170870880797853,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0.218362563746178,0.269728692769641,0,0.523511883968059,0.129614973291793,1.24267862617385,0.56369293868419,0,0,0,0,0.337912250981556,0.352071715937262,0.2604087696879,0.314578033277133,0.483168241652012,0,0,0,0,0.389762468933385,0,0,0.360586348559907,0,0.100966449948148,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0.269141569828427,0,0.772758376128762,0.187682475451182,0.183151624267265,0,0,1.12950368523413,2.30162618253588,0.572895513439397,0.68741272937475,2.05524755931193,3.7769694869485,0,0.900642406448441,2.26571204492102,0.51776031175182,0.415149390336707,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0,0,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.342869252385415,0.70990322463735,0.238436189947321,0,0.188218760830661,0.25384382367503,0.365855945745545,0,0.271608227691724,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p10@Plcb4 | |||
}} |
Revision as of 22:12, 13 September 2013
Short description: | p10@Plcb4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Plcb4_5end |
Coexpression cluster: | NA |
Association with transcript: | 112bp_to_ENSMUST00000147122_5end |
EntrezGene: | Plcb4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.65e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 9.23e-15 | 54 |
raphe nuclei | 2.65e-13 | 3 |
reticular formation | 2.65e-13 | 3 |
central nervous system | 8.03e-12 | 73 |
nervous system | 1.98e-11 | 75 |
neural tube | 3.31e-11 | 52 |
neural rod | 3.31e-11 | 52 |
future spinal cord | 3.31e-11 | 52 |
neural keel | 3.31e-11 | 52 |
occipital lobe | 1.84e-10 | 10 |
visual cortex | 1.84e-10 | 10 |
neocortex | 1.84e-10 | 10 |
ectoderm-derived structure | 1.05e-09 | 95 |
ectoderm | 1.05e-09 | 95 |
presumptive ectoderm | 1.05e-09 | 95 |
neurectoderm | 1.12e-08 | 64 |
neural plate | 1.12e-08 | 64 |
presumptive neural plate | 1.12e-08 | 64 |
posterior neural tube | 2.92e-08 | 12 |
chordal neural plate | 2.92e-08 | 12 |
regional part of brain | 1.53e-07 | 46 |
structure with developmental contribution from neural crest | 1.86e-07 | 92 |
brain | 2.40e-07 | 47 |
future brain | 2.40e-07 | 47 |
ecto-epithelium | 2.53e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.