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FFCP PHASE1:Mm9::chr6:28430386..28430413,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=56463|HGNC=|MCL_coexpression_id=872|UniProt=Q3TJ56|association_with_transcript=27bp_to_ENSMUST00000167201_5end|description=CAGE_peak_1_at_Snd1_5end|id=chr6:28430386..28430413,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001264!2.44e-09!12;UBERON:0003922!2.44e-09!12;UBERON:0002114!2.44e-09!12;UBERON:0003923!2.44e-09!12;UBERON:0003924!2.44e-09!12;UBERON:0003921!2.44e-09!12;UBERON:0002365!1.87e-08!25;UBERON:0002330!1.87e-08!25;UBERON:0001045!2.37e-08!13;UBERON:0002108!1.09e-07!16;UBERON:0004119!1.68e-07!130;UBERON:0000925!1.68e-07!130;UBERON:0006595!1.68e-07!130;UBERON:0000466!2.33e-07!79;UBERON:0001007!8.21e-07!128;UBERON:0001555!8.21e-07!128;UBERON:0007026!8.21e-07!128;UBERON:0002107!8.94e-07!22;UBERON:0007499!8.94e-07!22;UBERON:0006925!8.94e-07!22;UBERON:0009497!8.94e-07!22;UBERON:0000015!8.94e-07!22;UBERON:0002423!8.94e-07!22;UBERON:0006235!8.94e-07!22;UBERON:0008835!8.94e-07!22;UBERON:0003894!8.94e-07!22;UBERON:0004161!8.94e-07!22;UBERON:0008836!8.94e-07!22;UBERON:0000160!9.24e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.44e-09,12;UBERON:0002365,1.87e-08,25;UBERON:0002330,1.87e-08,25;UBERON:0002107,8.94e-07,22;UBERON:0007499,8.94e-07,22;UBERON:0006925,8.94e-07,22;UBERON:0009497,8.94e-07,22;UBERON:0000015,8.94e-07,22;UBERON:0002423,8.94e-07,22;UBERON:0006235,8.94e-07,22;UBERON:0008835,8.94e-07,22;UBERON:0003894,8.94e-07,22;UBERON:0004161,8.94e-07,22;UBERON:0008836,8.94e-07,22|phase1_expression=51.2476310735341,69.7950815278722,48.2299193752908,46.5794885412518,54.0967388342055,58.5898658972495,75.2232702717593,40.5447235606549,52.795770806875,64.8358737911922,49.4819928171709,57.0370936816655,32.3569379569979,33.219752919219,30.9792078488566,26.3217847606774,20.9868563438444,32.9657962799358,30.3022898268683,20.7950929381035,27.2138528483423,70.5958663038294,70.7851428566515,63.8369766945693,53.2229532075834,43.0673973086265,51.691439539089,51.2821533792416,54.1566745450666,41.5849714103886,63.1931955367618,46.3572391625531,49.2051830067656,15.8481681015439,63.8362079650317,59.0132991022648,66.1508714290076,14.2300754450549,17.9707129240474,14.6586648312664,5.88231488031014,5.46436387966757,6.311634589405,44.1897831094276,43.0851957682937,56.5323996657979,46.1610893165343,98.1113203712009,100.835957875123,82.2438473084219,122.348132500567,97.7517437681807,24.160695272314,43.5217285206807,39.3229744996683,75.6342741945684,75.0717612639543,56.7239301505187,33.3822160418336,40.7323054039465,32.3254015788151,94.5376244472879,117.38691308667,57.5935819060095,61.3097144791524,44.0497671266582,54.8268202248681,43.0324501960141,29.1367810586822,32.4014251996058,34.2829687002753,26.5655415495537,27.1668305370485,30.7451906029535,27.8910320663068,33.0918763179608,26.4278114398533,21.5791601363967,21.8121277223866,32.8396856448183,32.0206752608434,29.1711487511786,16.4717969410815,23.0732670112989,26.1285003698345,36.5339445987348,30.0404246486107,37.0934897192348,35.2884060932638,51.8420902332549,42.8999443278483,65.3922146505854,94.5160153853773,96.0671681115314,132.554389159325,90.9494580807591,46.3466586434781,64.0818012893497,63.3877851231,63.6011234118612,43.9431469703243,17.9657068380045,35.6727335589304,0,52.8238140067362,40.7909383414909,44.9916756063157,47.9572294820052,63.1808436099099,34.1416919849097,60.8933496949137,55.7171825311218,54.4252573524298,42.3530619952869,36.9228540406113,24.1279855352977,88.2486034811715,21.256105467227,35.384422077995,58.0742991311199,54.7686965781776,76.1254147422299,42.8701050801681,23.7152445579353,30.9981126083913,80.4689723907063,83.7507720296383,71.3884249882155,84.501701003588,19.472783122627,22.4175295381127,28.5235379296202,23.4662832259573,27.872984849006,19.5320761885986,26.6075671431123,63.1404055871961,67.3041711000603,84.4094013168474,55.7670918099156,55.6915495880372,44.1412040512268,44.2952839321159,45.3621501685502,32.997702088394,32.0284300712124,30.4530604819119,32.855328083855,63.8081259081213,62.5941125355482,77.5944457563014,64.2243496012794,77.2971352847162,73.132954969655,72.4353120155961,58.516074444637,75.8390242298294,82.8660260909383,87.8065213132381,62.1377317606506,75.2828652539319,64.1020938801213,65.8150364926884,56.0778060480101,64.7921874126989,65.1095045301142,69.4828109625014,51.9605773533904,55.127549721016,35.2960047770055,31.454698103792,36.8423968311837,39.079920521807,29.9280313835629,48.9975580154416,27.7842453424068,59.4753809370836,73.2528069658018,52.4689096316676,60.381534683714,67.2688148101327,74.2195370613901,67.1581692411508,52.6924984331789,64.5359523700536,51.3860738738914,43.9836615400472,43.7704238490532,45.0367041245168,59.3220809711786,54.2506505185483,57.7509692437665,50.6413295544728,69.5773441793249,73.2600281875023,64.150168271274,62.6466533551431,47.9729008049779,38.0683953488029,26.717436784308,26.6897837330337,27.1473760627961,101.683251090892,47.7177002348029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|EntrezGene=56463
|HGNC=
|MCL_coexpression_id=872
|UniProt=Q3TJ56
|association_with_transcript=27bp_to_ENSMUST00000167201_5end
|description=CAGE_peak_1_at_Snd1_5end
|id=chr6:28430386..28430413,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001264!2.44e-09!12;UBERON:0003922!2.44e-09!12;UBERON:0002114!2.44e-09!12;UBERON:0003923!2.44e-09!12;UBERON:0003924!2.44e-09!12;UBERON:0003921!2.44e-09!12;UBERON:0002365!1.87e-08!25;UBERON:0002330!1.87e-08!25;UBERON:0001045!2.37e-08!13;UBERON:0002108!1.09e-07!16;UBERON:0004119!1.68e-07!130;UBERON:0000925!1.68e-07!130;UBERON:0006595!1.68e-07!130;UBERON:0000466!2.33e-07!79;UBERON:0001007!8.21e-07!128;UBERON:0001555!8.21e-07!128;UBERON:0007026!8.21e-07!128;UBERON:0002107!8.94e-07!22;UBERON:0007499!8.94e-07!22;UBERON:0006925!8.94e-07!22;UBERON:0009497!8.94e-07!22;UBERON:0000015!8.94e-07!22;UBERON:0002423!8.94e-07!22;UBERON:0006235!8.94e-07!22;UBERON:0008835!8.94e-07!22;UBERON:0003894!8.94e-07!22;UBERON:0004161!8.94e-07!22;UBERON:0008836!8.94e-07!22;UBERON:0000160!9.24e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.44e-09,12;UBERON:0002365,1.87e-08,25;UBERON:0002330,1.87e-08,25;UBERON:0002107,8.94e-07,22;UBERON:0007499,8.94e-07,22;UBERON:0006925,8.94e-07,22;UBERON:0009497,8.94e-07,22;UBERON:0000015,8.94e-07,22;UBERON:0002423,8.94e-07,22;UBERON:0006235,8.94e-07,22;UBERON:0008835,8.94e-07,22;UBERON:0003894,8.94e-07,22;UBERON:0004161,8.94e-07,22;UBERON:0008836,8.94e-07,22
|phase1_expression=51.2476310735341,69.7950815278722,48.2299193752908,46.5794885412518,54.0967388342055,58.5898658972495,75.2232702717593,40.5447235606549,52.795770806875,64.8358737911922,49.4819928171709,57.0370936816655,32.3569379569979,33.219752919219,30.9792078488566,26.3217847606774,20.9868563438444,32.9657962799358,30.3022898268683,20.7950929381035,27.2138528483423,70.5958663038294,70.7851428566515,63.8369766945693,53.2229532075834,43.0673973086265,51.691439539089,51.2821533792416,54.1566745450666,41.5849714103886,63.1931955367618,46.3572391625531,49.2051830067656,15.8481681015439,63.8362079650317,59.0132991022648,66.1508714290076,14.2300754450549,17.9707129240474,14.6586648312664,5.88231488031014,5.46436387966757,6.311634589405,44.1897831094276,43.0851957682937,56.5323996657979,46.1610893165343,98.1113203712009,100.835957875123,82.2438473084219,122.348132500567,97.7517437681807,24.160695272314,43.5217285206807,39.3229744996683,75.6342741945684,75.0717612639543,56.7239301505187,33.3822160418336,40.7323054039465,32.3254015788151,94.5376244472879,117.38691308667,57.5935819060095,61.3097144791524,44.0497671266582,54.8268202248681,43.0324501960141,29.1367810586822,32.4014251996058,34.2829687002753,26.5655415495537,27.1668305370485,30.7451906029535,27.8910320663068,33.0918763179608,26.4278114398533,21.5791601363967,21.8121277223866,32.8396856448183,32.0206752608434,29.1711487511786,16.4717969410815,23.0732670112989,26.1285003698345,36.5339445987348,30.0404246486107,37.0934897192348,35.2884060932638,51.8420902332549,42.8999443278483,65.3922146505854,94.5160153853773,96.0671681115314,132.554389159325,90.9494580807591,46.3466586434781,64.0818012893497,63.3877851231,63.6011234118612,43.9431469703243,17.9657068380045,35.6727335589304,0,52.8238140067362,40.7909383414909,44.9916756063157,47.9572294820052,63.1808436099099,34.1416919849097,60.8933496949137,55.7171825311218,54.4252573524298,42.3530619952869,36.9228540406113,24.1279855352977,88.2486034811715,21.256105467227,35.384422077995,58.0742991311199,54.7686965781776,76.1254147422299,42.8701050801681,23.7152445579353,30.9981126083913,80.4689723907063,83.7507720296383,71.3884249882155,84.501701003588,19.472783122627,22.4175295381127,28.5235379296202,23.4662832259573,27.872984849006,19.5320761885986,26.6075671431123,63.1404055871961,67.3041711000603,84.4094013168474,55.7670918099156,55.6915495880372,44.1412040512268,44.2952839321159,45.3621501685502,32.997702088394,32.0284300712124,30.4530604819119,32.855328083855,63.8081259081213,62.5941125355482,77.5944457563014,64.2243496012794,77.2971352847162,73.132954969655,72.4353120155961,58.516074444637,75.8390242298294,82.8660260909383,87.8065213132381,62.1377317606506,75.2828652539319,64.1020938801213,65.8150364926884,56.0778060480101,64.7921874126989,65.1095045301142,69.4828109625014,51.9605773533904,55.127549721016,35.2960047770055,31.454698103792,36.8423968311837,39.079920521807,29.9280313835629,48.9975580154416,27.7842453424068,59.4753809370836,73.2528069658018,52.4689096316676,60.381534683714,67.2688148101327,74.2195370613901,67.1581692411508,52.6924984331789,64.5359523700536,51.3860738738914,43.9836615400472,43.7704238490532,45.0367041245168,59.3220809711786,54.2506505185483,57.7509692437665,50.6413295544728,69.5773441793249,73.2600281875023,64.150168271274,62.6466533551431,47.9729008049779,38.0683953488029,26.717436784308,26.6897837330337,27.1473760627961,101.683251090892,47.7177002348029,60.9332884850929,63.6359778049136,55.9893935032268,72.8355022452299,91.6653066413111,97.5289905958248,56.2609236909373,80.995616890484,70.4464211984037,75.9167533243747,80.8177573366712,80.0675043092344,105.306281737362,106.137574699941,38.2439103644872,60.0687775312437,60.1340763071075,74.857582826858,64.0704377827611,55.444571213241,71.6511359066901,63.028168258069,47.2905432318573,38.9777853781844,45.7635186046988,46.7010446939853,49.7332747773779,45.7091025117577,46.7452980211744,29.914812610029,281.780928439908,160.871123095659,22.4770825982909,20.6292568402278,126.557777830793,36.1033425902253,36.5989534522858,39.0438744296638,51.4861920581389,50.4224163679885,44.3369361423964,39.9137908412254,42.100312974189,40.9158201075837,38.7382022387593,17.3513510867776,63.0213978324713,66.2404045642189,50.332070440255,60.2140948849754,399.562866403288,111.436311995136,161.138455862212,315.347693351862,279.355590665211,271.772670782432,138.775993431335,203.578888507403,238.853243517763,377.979962491236,443.812342100745,468.235366346768,126.983972946163,55.4588169616435,51.3553974617535,57.2279883534351,64.197164578503,41.9166721364866,71.9079220031269,90.1216249379214,124.376005273766,97.8664167390849,117.541636163295,26.7115729765198,41.3348932341518,37.6955780800974,30.3205753767967,30.0377846533462,58.0046864893403,23.5490133553347,46.4768795770159,53.2478119345114,55.7435527382832,32.9644799758209,36.2239703460717,33.4016132881523,74.2805739073148,87.0498033453153,93.8377822132038,42.9601778106801,51.5627669537251,81.3277868507395,70.9595089199234,68.9991376847747,77.9554352573854,76.4680844001933,61.0809037810233,59.6803547723588,26.1822246049422,117.433130173429,7.89170114157866,58.6104860492397,54.1049263794709,50.5573089694524,57.3469616241126,52.0384866511597,44.830465162678,46.6131697741341,51.8005161463012,25.1247485659046,19.298010419277,38.2373455960096,83.928239130128,82.3741876461915,73.9249482743654,59.4368629616038,43.1138539875345,42.1886027815091,38.5469665925647,37.1556535809183,33.2261677015799,35.7932957235784,37.9111156077637,36.1756524567639,33.4267940239287,27.4343764174406,55.2745023901421,74.7316425556933,54.7303849346896,29.3648182928929,97.970252185517,79.8541081805276,51.4484109789758,122.383593384629,30.4965995013216,25.7782132444019,41.2484769676366,37.1202873862365,16.4419804744954,29.4603619981983,24.300810008345,21.6154177547626,21.7508356312418,20.192652158321,51.3747370541674,47.0849350613217,49.683479274453,69.7716277986004,44.0187641518763,58.0945486702045,62.0068370566506,71.4941648618963,64.1838419183631,63.9323945762408,67.9324523705843,60.9263082677026,55.71669694458,60.3757187177917,56.286759576501,53.8211871149873,57.9421629724277,58.6444030209663,52.7469953028232,58.5851702134901,66.5166349627706,72.9425563314877,58.1784303471463,67.8767765672974,62.0180816937029,65.914779547616,60.5491590208877,64.9782187251472,59.0747895229499,72.948495315506,68.2151354214001,57.8221311544558,51.5631114393809,57.9463786035513,66.7456873994749,65.4503714197418,53.5703383339985,43.4039529177563,41.3182797268702,45.6624237577397,40.8087390691942
|short_description=p1@Snd1
}}

Revision as of 09:32, 14 September 2013

Short description:p1@Snd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Snd1_5end
Coexpression cluster:MCL_coexpression_mm9:872
Association with transcript: 27bp_to_ENSMUST00000167201_5end
EntrezGene:Snd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Snd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G751.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I569.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I648.23
CD326+ enterocyte, pool1.CNhs13542.11848-124I346.58
CD326+ enterocyte, pool2.CNhs13197.11849-124I454.10
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I758.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I875.22
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E940.54
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E752.80
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F264.84
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E649.48
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F157.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E432.36
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E833.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A130.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A326.32
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A520.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A232.97
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A430.30
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A620.80
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A327.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H270.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I970.79
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D163.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D253.22
GP2+ M cell, pool1.CNhs13228.11845-124H943.07
GP2+ M cell, pool2.CNhs13231.11846-124I151.69
GP2+ M cell, pool3.CNhs13240.11847-124I251.28
Ileum epithelium, pool1.CNhs13199.10252-104B954.16
Ileum epithelium, pool2.CNhs13232.10253-104C141.58
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C863.19
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I346.36
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G649.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F563.84
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F659.01
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F766.15
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G814.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H117.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H314.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D844.19
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D943.09
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B356.53
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B746.16
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C298.11
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8100.84
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C382.24
Mouse Astrocytes, donor2.CNhs12078.11552-120C4122.35
Mouse Astrocytes, donor3.CNhs12107.11633-122C497.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A224.16
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I943.52
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A139.32
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C175.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E175.07
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C556.72
Mouse Granule cells, donor1.CNhs12131.11713-123C333.38
Mouse Granule cells, donor2.CNhs12357.11731-123E340.73
Mouse Granule cells, donor3.CNhs12108.11636-122C732.33
Mouse Meningeal cells, donor1.CNhs12132.11716-123C694.54
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1117.39
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C757.59
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E761.31
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D244.05
Mouse Microglia, donor1.CNhs12629.11718-123C854.83
Mouse Microglia, donor2.CNhs12634.11736-123E843.03
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D529.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F532.40
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D934.28
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F126.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D527.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D230.75
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F227.89
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D633.09
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.81
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D432.84
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F432.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D829.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I626.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D636.53
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F630.04
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E137.09
Mouse Schwann, donor1.CNhs12507.11728-123D935.29
Mouse Schwann, donor2.CNhs12573.11746-123F951.84
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G342.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F765.39
Mouse hepatocyte, donor1.CNhs13078.11714-123C494.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C896.07
Mouse hepatocyte, donor6.CNhs13090.11822-124F4132.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F690.95
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A746.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I764.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E363.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I863.60
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G643.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I835.67
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G152.82
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G240.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G344.99
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B647.96
accessory axillary lymph node, adult.CNhs10475.1063-29H963.18
adrenal gland, adult.CNhs10508.49-24D734.14
adrenal gland, embryo E14.CNhs11038.406-44C560.89
adrenal gland, embryo E16.CNhs11004.1254-43D655.72
adrenal gland, embryo E17.CNhs11043.1263-45I154.43
adrenal gland, embryo E18.CNhs11026.1262-18F542.35
adrenal gland, neonate N00.CNhs11191.1311-23C136.92
adrenal gland, neonate N25.CNhs11223.1377-27I324.13
amnion, adult pregnant day17.5.CNhs10488.583-22A888.25
aorta, adult.CNhs10498.46-23H121.26
bone (os femoris), adult.CNhs10483.56-12G235.38
bone (os femoris), neonate N02.CNhs11227.1985-43F558.07
bone (os femoris), neonate N16.CNhs11225.1525-43A654.77
bone (os femoris), neonate N20.CNhs11195.1350-25C376.13
cecum, adult.CNhs10467.37-13H442.87
cerebellum, adult.CNhs10494.15-8B223.72
cerebellum, neonate N30.CNhs11135.1395-42I231.00
colon, adult.CNhs10468.36-18H780.47
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C783.75
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D171.39
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D484.50
corpora quadrigemina, adult.CNhs10501.16-22A419.47
corpus striatum, adult.CNhs10487.19-21D822.42
corpus striatum, neonate N00.CNhs11226.630-43F128.52
cortex, adult.CNhs10473.12-14D523.47
cortex, neonate N30.CNhs11107.1392-42F227.87
diencephalon, adult.CNhs10482.20-12F219.53
diencephalon, neonate N30.CNhs11201.1388-42B226.61
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B163.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A267.30
epididymis, adult.CNhs10490.58-23B284.41
eyeball, adult.CNhs10484.31-12G455.77
eyeball, embryo E12.CNhs11016.345-16C655.69
eyeball, embryo E14.CNhs10521.399-16E244.14
eyeball, embryo E15.CNhs10593.426-16C944.30
eyeball, embryo E17.CNhs11023.1261-18D445.36
eyeball, neonate N00.CNhs11207.633-15C633.00
eyeball, neonate N01.CNhs11140.1532-43E732.03
eyeball, neonate N02.CNhs11205.1551-44G830.45
eyeball, neonate N16.CNhs11188.777-19A232.86
forelimb, embryo E11.CNhs10596.335-25E263.81
forelimb, embryo E12.CNhs10600.359-14H262.59
forelimb, embryo E13.CNhs10589.384-1E277.59
forelimb, embryo E14.CNhs10577.413-26A864.22
forelimb, embryo E15.CNhs11007.437-20E777.30
forelimb, embryo E17.CNhs10598.1517-43C473.13
forelimb, embryo E18.CNhs11008.1520-43B572.44
gonad, embryo E13.CNhs11044.1564-45I658.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C875.84
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D282.87
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D587.81
heart, embryo E11.CNhs10586.331-24E962.14
heart, embryo E12.CNhs11015.353-12F575.28
heart, embryo E13.CNhs11013.376-3I964.10
heart, embryo E14.CNhs10597.403-26D465.82
heart, embryo E15.CNhs11017.431-16C856.08
heart, embryo E16.CNhs11021.457-17C664.79
heart, embryo E17.CNhs11025.479-18E565.11
heart, embryo E18.CNhs11030.1283-20G369.48
heart, neonate N00.CNhs11213.639-21E351.96
heart, neonate N03.CNhs11221.1349-25I255.13
heart, neonate N10.CNhs11118.749-24G135.30
heart, neonate N16.CNhs11209.782-15G131.45
heart, neonate N20.CNhs11127.821-26I636.84
heart, neonate N25.CNhs11196.1351-25D339.08
heart, neonate N30.CNhs11202.1390-42D229.93
hippocampus, adult.CNhs10478.13-16E849.00
hippocampus, neonate N00.CNhs11228.627-43G127.78
intestinal mucosa, adult.CNhs10506.860-29I359.48
intestine, adult.CNhs10496.178-9A373.25
intestine, embryo E12.CNhs11019.1251-16I552.47
intestine, embryo E13.CNhs11010.381-16D560.38
intestine, embryo E15.CNhs10602.976-16D867.27
intestine, embryo E16.CNhs10585.463-22H474.22
intestine, embryo E17.CNhs10582.482-18D367.16
intestine, embryo E18.CNhs10526.1289-20F752.69
intestine, neonate N00.CNhs11126.644-26D164.54
intestine, neonate N01.CNhs11192.1322-23E951.39
intestine, neonate N06.CNhs11102.688-20B843.98
intestine, neonate N07.CNhs11095.720-20F243.77
intestine, neonate N10.CNhs11098.755-23A545.04
intestine, neonate N20.CNhs11187.827-18D159.32
intestine, neonate N25.CNhs11121.1352-25E354.25
intestine, neonate N30.CNhs11131.1384-42G157.75
kidney, embryo E14.CNhs10606.411-4I950.64
kidney, embryo E15.CNhs10997.434-16F869.58
kidney, embryo E16.CNhs10584.464-22A573.26
kidney, embryo E17.CNhs11028.483-18I264.15
kidney, embryo E18.CNhs11001.1288-20C762.65
kidney, neonate N00.CNhs11214.646-21G747.97
kidney, neonate N10.CNhs11206.758-6D538.07
kidney, neonate N20.CNhs11113.832-19I126.72
kidney, neonate N25.CNhs11122.1353-25F326.69
kidney, neonate N30.CNhs11203.1385-42H127.15
liver, adult pregnant day01.CNhs10466.508-5B2101.68
liver, embryo E12.CNhs10601.355-15F847.72
liver, embryo E13.CNhs10524.378-3H660.93
liver, embryo E14.CNhs10594.409-16E163.64
liver, embryo E15.CNhs10520.433-16D755.99
liver, embryo E16.CNhs10523.462-17F572.84
liver, embryo E17.CNhs10510.481-18A391.67
liver, embryo E18.CNhs10579.499-43G497.53
liver, neonate N00.CNhs11117.641-24F456.26
liver, neonate N03.CNhs11123.1345-25G281.00
liver, neonate N06.CNhs11101.684-20A870.45
liver, neonate N07.CNhs11103.716-20H275.92
liver, neonate N10.CNhs11115.751-24B980.82
liver, neonate N20.CNhs11220.823-25A380.07
liver, neonate N25.CNhs11198.1368-26H1105.31
liver, neonate N30.CNhs11106.1382-42D1106.14
lung, adult.CNhs10474.28-22B138.24
lung, embryo E12.CNhs10522.354-16G260.07
lung, embryo E14.CNhs10604.404-26F860.13
lung, embryo E15.CNhs11020.432-17C574.86
lung, embryo E16.CNhs10998.458-17B664.07
lung, embryo E17.CNhs10605.480-44A655.44
lung, embryo E18.CNhs10583.1287-20I671.65
lung, neonate N00.CNhs11224.640-42C663.03
lung, neonate N06.CNhs11212.683-20E547.29
lung, neonate N07.CNhs11111.715-19A338.98
lung, neonate N10.CNhs11219.750-23E645.76
lung, neonate N20.CNhs11109.822-18A446.70
lung, neonate N25.CNhs11119.1359-25C749.73
lung, neonate N30.CNhs11133.1394-42H245.71
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A146.75
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A129.91
mammary gland, adult lactating day02.CNhs10480.595-22B6281.78
mammary gland, adult pregnant day19.CNhs10476.588-5H2160.87
medulla oblongata, adult.CNhs10477.17-12C222.48
medulla oblongata, neonate N30.CNhs11200.1396-42A320.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7126.56
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C236.10
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E136.60
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E239.04
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E351.49
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D750.42
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D844.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D939.91
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D442.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D540.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D638.74
olfactory brain, adult.CNhs10489.18-22I917.35
ovary, adult.CNhs10507.91-2I763.02
ovary, embryo E18.CNhs11040.505-44H766.24
ovary, neonate N00.CNhs11217.1299-22I450.33
oviduct, adult pregnant day01.CNhs10500.988-6G660.21
pancreas, adult.CNhs10486.34-16E4399.56
pancreas, embryo E14.CNhs11012.405-44F4111.44
pancreas, embryo E15.CNhs11042.1556-45F2161.14
pancreas, embryo E16.CNhs11003.460-26E5315.35
pancreas, embryo E17.CNhs10599.1558-45G3279.36
pancreas, embryo E18.CNhs10580.1535-43I7271.77
pancreas, neonate N00.CNhs11105.645-26G9138.78
pancreas, neonate N01.CNhs11138.1531-43D7203.58
pancreas, neonate N02.CNhs11139.1539-43D8238.85
pancreas, neonate N16.CNhs11136.787-43B6377.98
pancreas, neonate N25.CNhs11094.1555-45E2443.81
pancreas, neonate N30.CNhs11182.1548-44H5468.24
pituitary gland, adult.CNhs10493.21-1G8126.98
pituitary gland, embryo E12.CNhs11018.346-16E655.46
pituitary gland, embryo E13.CNhs11009.370-44C751.36
pituitary gland, embryo E14.CNhs11037.398-44A557.23
pituitary gland, embryo E15.CNhs10592.427-16B964.20
pituitary gland, embryo E16.CNhs11036.449-43F641.92
pituitary gland, embryo E17.CNhs11039.1265-44F571.91
pituitary gland, neonate N00.CNhs11190.1308-22E990.12
placenta, adult pregnant day10.CNhs10472.539-13I7124.38
placenta, adult pregnant day17.CNhs10464.577-18G397.87
prostate, adult.CNhs10470.859-1F8117.54
skin, adult.CNhs10492.30-1C326.71
skin, neonate N00.CNhs11124.650-25G441.33
skin, neonate N03.CNhs11215.662-22H337.70
skin, neonate N06.CNhs11097.693-20I530.32
skin, neonate N10.CNhs11108.762-6C430.04
small intestine, neonate N16.CNhs11114.790-21I158.00
spinal cord, adult.CNhs10505.24-13C923.55
spleen, adult.CNhs10465.25-2G246.48
spleen, embryo E16.CNhs11035.461-43C153.25
spleen, embryo E18.CNhs11011.1271-21F255.74
spleen, neonate N10.CNhs11116.752-24D132.96
spleen, neonate N20.CNhs11112.824-19H136.22
spleen, neonate N25.CNhs11099.1354-25G333.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C674.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C987.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D393.84
stomach, adult.CNhs10503.33-1H642.96
stomach, embryo E12.CNhs10588.356-43E351.56
stomach, embryo E15.CNhs10603.1252-16G881.33
stomach, embryo E16.CNhs11022.459-17D470.96
stomach, embryo E17.CNhs11006.1035-18D569.00
stomach, embryo E18.CNhs10999.1286-20C677.96
stomach, neonate N03.CNhs11193.1340-24B876.47
stomach, neonate N07.CNhs11210.718-18A961.08
stomach, neonate N25.CNhs11104.1355-25E459.68
stomach, neonate N30.CNhs11134.1386-42I126.18
submandibular gland, adult.CNhs10469.59-29C1117.43
testis, adult.CNhs10504.57-7G57.89
testis, embryo E13.CNhs11031.389-23F558.61
testis, embryo E15.CNhs11034.443-27C554.10
testis, embryo E16.CNhs11033.470-26G550.56
testis, embryo E17.CNhs11029.486-18I557.35
testis, embryo E18.CNhs11027.503-18G552.04
testis, neonate N00.CNhs11189.1300-22B744.83
testis, neonate N07.CNhs11222.726-26I446.61
testis, neonate N10.CNhs11204.763-44D951.80
testis, neonate N20.CNhs11110.839-18H325.12
testis, neonate N30.CNhs11130.1391-42E219.30
thymus, adult.CNhs10471.38-12B538.24
thymus, embryo E14.CNhs11041.402-44I483.93
thymus, embryo E15.CNhs11005.430-45I282.37
thymus, embryo E16.CNhs11002.456-26C573.92
thymus, embryo E17.CNhs10581.478-18C159.44
thymus, embryo E18.CNhs10595.1273-19G443.11
thymus, neonate N02.CNhs11181.1541-43F842.19
thymus, neonate N03.CNhs11137.2104-43C738.55
thymus, neonate N06.CNhs11197.681-26C437.16
thymus, neonate N07.CNhs11211.713-19D333.23
thymus, neonate N10.CNhs11194.748-24E435.79
thymus, neonate N20.CNhs11186.820-7A237.91
thymus, neonate N25.CNhs11125.1362-25G736.18
thymus, neonate N30.CNhs11132.1393-42G233.43
tongue, adult.CNhs10499.32-1B427.43
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H355.27
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F774.73
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G554.73
urinary bladder, adult.CNhs10481.879-12E429.36
uterus, adult pregnant day19.CNhs10497.590-15F597.97
uterus, adult.CNhs10509.92-27E579.85
vagina, adult.CNhs10502.89-27D551.45
vesicular gland, adult.CNhs10491.51-27F8122.38
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A130.50
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A225.78
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A341.25
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D737.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A721.62
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A821.75
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.19
whole body, embryo E11.CNhs11014.324-5I851.37
whole body, embryo E12.CNhs10587.857-27C947.08
whole body, embryo E13.CNhs10512.372-23H249.68
whole body, embryo E14.5.CNhs10578.420-27D269.77
whole body, embryo E14.CNhs10519.395-14B144.02
whole body, embryo E16.CNhs10514.453-14F258.09
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G562.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G571.49
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G564.18
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G563.93
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G567.93
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G560.93
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G555.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G560.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G556.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G553.82
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G557.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G558.64
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G552.75
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G558.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G566.52
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G572.94
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G558.18
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G567.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G562.02
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G565.91
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G560.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G564.98
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G559.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G572.95
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G568.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G557.82
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G551.56
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G557.95
whole body, embryo E17.5.CNhs10513.490-9F966.75
whole body, embryo E17.CNhs10517.475-3I565.45
whole body, embryo E18.CNhs10516.493-3B353.57
whole body, neonate N00.CNhs10525.657-19C243.40
whole body, neonate N01.CNhs10576.659-23C641.32
whole body, neonate N06.CNhs10515.692-21D145.66
whole body, neonate N10.CNhs10518.761-6B440.81





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pancreas2.44e-0912
exocrine gland1.87e-0825
exocrine system1.87e-0825
liver8.94e-0722
epithelial sac8.94e-0722
digestive gland8.94e-0722
epithelium of foregut-midgut junction8.94e-0722
anatomical boundary8.94e-0722
hepatobiliary system8.94e-0722
foregut-midgut junction8.94e-0722
hepatic diverticulum8.94e-0722
liver primordium8.94e-0722
septum transversum8.94e-0722
liver bud8.94e-0722







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