FFCP PHASE1:Mm9::chr8:82163391..82163418,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=73945|HGNC=|MCL_coexpression_id=143|UniProt=B2RRE7|association_with_transcript=-98bp_to_ENSMUST00000173078_5end|description=CAGE_peak_5_at_Otud4_5end|id=chr8:82163391..82163418,+|ontology_enrichment_celltype=CL:0000838!4.42e-07!12;CL:0000084!8.00e-07!11;CL:0000827!8.00e-07!11;CL:0000542!9.83e-07!13;CL:0000051!9.83e-07!13|ontology_enrichment_celltype_v019_2=CL:0000838,2.57e-07,12;CL:0000084,4.77e-07,11;CL:0000827,4.77e-07,11;CL:0000542,5.92e-07,13;CL:0000051,5.92e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!7.63e-11!147;UBERON:0000926!9.81e-08!193;UBERON:0004120!9.81e-08!193;UBERON:0006603!9.81e-08!193|ontology_enrichment_uberon_v019_2=UBERON:0001048,3.54e-11,134|phase1_expression=2.40223270657191,0,0,0.30246421130683,0.500895729946347,0.839396359559449,1.63528848416868,2.1950964985068,11.9670413828917,11.4691617897777,5.99262888789267,7.6581272635523,2.56801094896809,2.44777126773193,0.999329285446988,0.809901069559304,0.699561878128147,2.68142840554502,1.91960207048034,1.27316895539409,1.36069264241712,3.3758923408301,3.13439746966722,0.47997726838022,0.68822784320151,0.57423196411502,0.86152399231815,0.861884930743556,0.760093677825496,0.252030129759931,1.77384408524244,6.35030673459631,3.69038872550742,0,1.73310971850765,1.16364251750945,2.6542016314108,0,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0.755380907853464,1.4192770370732,1.10128051297009,0,0.436050312760893,0.439372365468944,0.388859798148567,1.25987779462826,0,2.51673909086605,4.35217285206807,5.04140698713696,1.02903774414379,0,1.54701627683233,1.41621522601718,1.05798195854407,1.26766280701236,0.677689064138264,0,0,0,0,0.299600110518405,0.768436610643109,1.45165457231869,0.405017814995072,0.630974884054146,0.856952953211411,0.220868540951614,0.979926393719632,0.766763768145891,0,0,0.766124028511126,0.153606533256243,0.923204014111357,0.823388792421687,0.52091337055676,0,0.56276261003168,0.763991238884051,1.47314292736834,0.996601765593721,1.4911955666024,6.6639050133202,1.66257432234928,3.76823835312181,1.72084775396277,5.439770669662,1.61910957491345,1.29955283489534,0.448026887097336,1.40444420131752,0.681721290312231,1.29893002301434,0,2.11265129665021,0,0,0,5.62876706629157,6.33399663687746,6.57181778519218,1.37020655662872,1.8125651855302,1.33597925158342,0.867426633830679,1.82679286987285,2.30615497256059,0.753613202763113,0.823120949949934,1.25666591329675,2.71914464507811,1.01219549843938,0,2.58826959915855,1.54589062922275,0.969750506270444,0,0.585561594023094,0.628340120440365,1.02182822083437,3.71426885968353,2.39961092397363,3.68503658511888,0.748953197024114,0.457500602818626,1.63350657746724,0.173824320192276,0.767146371990992,0.62336413367868,0.973447578406546,0.81471491080253,1.49288364732112,1.26361379216837,1.05220927943237,2.47228841629137,0.689706313300419,1.80062129805349,1.35634336052144,2.4493139694478,2.43416068541215,1.59292931751539,1.03481348295606,2.15567992932842,1.70195472151037,1.75951124163949,1.97276159184817,1.39023624612799,0.696504333044333,1.02891068203972,3.78165106955137,2.1066395619397,2.05878325691772,2.55747149456033,2.69263504296152,2.81431271977315,3.96136535214233,4.26140524053378,2.75469924446365,2.93107514486019,1.86027155800326,0.536546802799238,2.56883753207773,3.94943639792353,2.46251196118643,2.83740833410495,2.77779976108131,1.97595103761946,3.22095405024892,0.420579897128254,1.23485534855141,0.991256348951394,0.528901133327089,1.49301775374664,2.55460339046482,2.19074684247559,1.61346819698674,1.11189021922435,0.760902504450237,1.42358718463353,0.988193728344065,0.754005626400808,0.596869416123452,2.14460495831032,2.69645822596266,0.432276099749388,0.398282546508734,1.89667900953082,2.28497025219458,3.38123207019241,0.814605311381257,1.16371492300575,1.68325967736765,0.948548056863859,1.47610147979602,1.255989822731,0.987177311374404,2.07516838961004,2.66952169145751,3.14494392181125,1.34917267430912,2.02860121388503,0.482354319504834,1.2731292589071,1.43848068725405,3.40483976227574,2.19649130550465,4.31304619582064,2.60498663367952,2.18426371180192,2.02063102357689,1.07638448113147,4.3419916922703,0.184753190166605,2.65287976478679,1.79261474086228,1.86719594352707,3.28566347603903,2.68010011906905,1.19021820443007,2.53673742215138,1.10344600874334,0.8858587585951,1.11618338060241,0.983179888294428,1.03610989119537,0.867894351489069,1.50791283939272,0,1.47529281905711,1.93155722413313,0.80275294993896,0.703270119553219,0.983609672260053,1.76729649043061,1.57754109708128,1.56175497718655,2.36965737506079,1.91175038362042,0,1.69845918473299,2.42886421004937,3.50707029493574,1.18586333383957,1.60660658210904,1.13552068166615,1.42452482933804,1.62886959353576,2.47455184458803,0,1.69946445308487,1.209294227859,1.69744571780308,1.77181135728464,2.45948118355142,1.80899805217755,0.363533729477506,2.13898427030833,2.84433082142234,2.10837217149998,1.03135543248187,1.70219802876894,1.260427658219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| ||
|EntrezGene=73945 | |||
|HGNC= | |||
|MCL_coexpression_id=143 | |||
|UniProt=B2RRE7 | |||
|association_with_transcript=-98bp_to_ENSMUST00000173078_5end | |||
|description=CAGE_peak_5_at_Otud4_5end | |||
|id=chr8:82163391..82163418,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.42e-07!12;CL:0000084!8.00e-07!11;CL:0000827!8.00e-07!11;CL:0000542!9.83e-07!13;CL:0000051!9.83e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.57e-07,12;CL:0000084,4.77e-07,11;CL:0000827,4.77e-07,11;CL:0000542,5.92e-07,13;CL:0000051,5.92e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!7.63e-11!147;UBERON:0000926!9.81e-08!193;UBERON:0004120!9.81e-08!193;UBERON:0006603!9.81e-08!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,3.54e-11,134 | |||
|phase1_expression=2.40223270657191,0,0,0.30246421130683,0.500895729946347,0.839396359559449,1.63528848416868,2.1950964985068,11.9670413828917,11.4691617897777,5.99262888789267,7.6581272635523,2.56801094896809,2.44777126773193,0.999329285446988,0.809901069559304,0.699561878128147,2.68142840554502,1.91960207048034,1.27316895539409,1.36069264241712,3.3758923408301,3.13439746966722,0.47997726838022,0.68822784320151,0.57423196411502,0.86152399231815,0.861884930743556,0.760093677825496,0.252030129759931,1.77384408524244,6.35030673459631,3.69038872550742,0,1.73310971850765,1.16364251750945,2.6542016314108,0,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0.755380907853464,1.4192770370732,1.10128051297009,0,0.436050312760893,0.439372365468944,0.388859798148567,1.25987779462826,0,2.51673909086605,4.35217285206807,5.04140698713696,1.02903774414379,0,1.54701627683233,1.41621522601718,1.05798195854407,1.26766280701236,0.677689064138264,0,0,0,0,0.299600110518405,0.768436610643109,1.45165457231869,0.405017814995072,0.630974884054146,0.856952953211411,0.220868540951614,0.979926393719632,0.766763768145891,0,0,0.766124028511126,0.153606533256243,0.923204014111357,0.823388792421687,0.52091337055676,0,0.56276261003168,0.763991238884051,1.47314292736834,0.996601765593721,1.4911955666024,6.6639050133202,1.66257432234928,3.76823835312181,1.72084775396277,5.439770669662,1.61910957491345,1.29955283489534,0.448026887097336,1.40444420131752,0.681721290312231,1.29893002301434,0,2.11265129665021,0,0,0,5.62876706629157,6.33399663687746,6.57181778519218,1.37020655662872,1.8125651855302,1.33597925158342,0.867426633830679,1.82679286987285,2.30615497256059,0.753613202763113,0.823120949949934,1.25666591329675,2.71914464507811,1.01219549843938,0,2.58826959915855,1.54589062922275,0.969750506270444,0,0.585561594023094,0.628340120440365,1.02182822083437,3.71426885968353,2.39961092397363,3.68503658511888,0.748953197024114,0.457500602818626,1.63350657746724,0.173824320192276,0.767146371990992,0.62336413367868,0.973447578406546,0.81471491080253,1.49288364732112,1.26361379216837,1.05220927943237,2.47228841629137,0.689706313300419,1.80062129805349,1.35634336052144,2.4493139694478,2.43416068541215,1.59292931751539,1.03481348295606,2.15567992932842,1.70195472151037,1.75951124163949,1.97276159184817,1.39023624612799,0.696504333044333,1.02891068203972,3.78165106955137,2.1066395619397,2.05878325691772,2.55747149456033,2.69263504296152,2.81431271977315,3.96136535214233,4.26140524053378,2.75469924446365,2.93107514486019,1.86027155800326,0.536546802799238,2.56883753207773,3.94943639792353,2.46251196118643,2.83740833410495,2.77779976108131,1.97595103761946,3.22095405024892,0.420579897128254,1.23485534855141,0.991256348951394,0.528901133327089,1.49301775374664,2.55460339046482,2.19074684247559,1.61346819698674,1.11189021922435,0.760902504450237,1.42358718463353,0.988193728344065,0.754005626400808,0.596869416123452,2.14460495831032,2.69645822596266,0.432276099749388,0.398282546508734,1.89667900953082,2.28497025219458,3.38123207019241,0.814605311381257,1.16371492300575,1.68325967736765,0.948548056863859,1.47610147979602,1.255989822731,0.987177311374404,2.07516838961004,2.66952169145751,3.14494392181125,1.34917267430912,2.02860121388503,0.482354319504834,1.2731292589071,1.43848068725405,3.40483976227574,2.19649130550465,4.31304619582064,2.60498663367952,2.18426371180192,2.02063102357689,1.07638448113147,4.3419916922703,0.184753190166605,2.65287976478679,1.79261474086228,1.86719594352707,3.28566347603903,2.68010011906905,1.19021820443007,2.53673742215138,1.10344600874334,0.8858587585951,1.11618338060241,0.983179888294428,1.03610989119537,0.867894351489069,1.50791283939272,0,1.47529281905711,1.93155722413313,0.80275294993896,0.703270119553219,0.983609672260053,1.76729649043061,1.57754109708128,1.56175497718655,2.36965737506079,1.91175038362042,0,1.69845918473299,2.42886421004937,3.50707029493574,1.18586333383957,1.60660658210904,1.13552068166615,1.42452482933804,1.62886959353576,2.47455184458803,0,1.69946445308487,1.209294227859,1.69744571780308,1.77181135728464,2.45948118355142,1.80899805217755,0.363533729477506,2.13898427030833,2.84433082142234,2.10837217149998,1.03135543248187,1.70219802876894,1.26042765821917,1.94038025674132,0.643011105094777,1.95074257006501,1.78368817602071,1.81003922662333,0.608929898229199,0.704015124191131,4.2366414172764,0.441056796109924,1.15420377059036,1.13025098687134,0.965006798850494,0.835606408021955,1.14898629821543,0.874442509889552,0,2.22132145037209,1.23832120777933,1.48155621895769,1.13021074202815,0.683471138605126,2.51655990527175,3.0596117398894,2.23922323717853,3.45499934511059,1.90934123603023,1.58167996790568,2.23651413839534,1.18805874903981,1.88179466413022,1.09181281873089,0.809186078308924,1.48776220305605,1.83229159388821,0.259229946583586,1.86401793926078,0.56369293868419,4.18646328923141,2.64733584731356,2.52786544847262,2.19571699912143,2.19642963138012,1.5256441023948,5.9894017028217,7.2352947653740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| |||
|short_description=p5@Otud4 | |||
}} |
Revision as of 16:08, 14 September 2013
Short description: | p5@Otud4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Otud4_5end |
Coexpression cluster: | MCL_coexpression_mm9:143 |
Association with transcript: | -98bp_to_ENSMUST00000173078_5end |
EntrezGene: | Otud4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.57e-07 | 12 |
T cell | 4.77e-07 | 11 |
pro-T cell | 4.77e-07 | 11 |
lymphocyte | 5.92e-07 | 13 |
common lymphoid progenitor | 5.92e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
primordium | 3.54e-11 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.