FFCP PHASE1:Mm9::chr12:74039853..74039857,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2041|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:74039853..74039857,-|id=chr12:74039853..74039857,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!2.23e-19!9;UBERON:0000019!2.23e-19!9;UBERON:0000047!2.23e-19!9;UBERON:0004088!2.23e-19!9;UBERON:0002104!2.23e-19!9;UBERON:0001456!2.23e-19!9;UBERON:0003072!2.23e-19!9;UBERON:0003071!2.23e-19!9;UBERON:0004128!2.23e-19!9;UBERON:0000007!6.48e-18!8;UBERON:0003296!6.48e-18!8;UBERON:0010133!6.48e-18!8;UBERON:0001444!1.72e-15!11;UBERON:0000020!4.93e-14!12;UBERON:0001032!4.93e-14!12;UBERON:0004456!4.93e-14!12;UBERON:0001894!5.38e-14!10;UBERON:0006222!5.38e-14!10;UBERON:0005085!8.41e-13!13;UBERON:0003056!9.04e-11!49;UBERON:0000033!2.22e-07!63;UBERON:0002346!7.45e-07!71;UBERON:0003075!7.45e-07!71;UBERON:0007284!7.45e-07!71;UBERON:0005418!9.81e-07!5;UBERON:0002472!9.81e-07!5;UBERON:0008784!9.81e-07!5;UBERON:0006058!9.81e-07!5;UBERON:0004709!9.81e-07!5;UBERON:0005420!9.81e-07!5;UBERON:0006057!9.81e-07!5;UBERON:0000978!9.81e-07!5;UBERON:0002103!9.81e-07!5;UBERON:0000376!9.81e-07!5;UBERON:0000154!9.81e-07!5;UBERON:0005730!9.81e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000970,8.98e-38,9;UBERON:0000019,8.98e-38,9;UBERON:0000047,8.98e-38,9;UBERON:0010312,8.98e-38,9;UBERON:0004088,8.98e-38,9;UBERON:0002104,8.98e-38,9;UBERON:0001456,8.98e-38,9;UBERON:0003072,8.98e-38,9;UBERON:0004128,8.98e-38,9;UBERON:0003071,8.98e-38,9;UBERON:0000007,7.28e-34,8;UBERON:0003296,7.28e-34,8;UBERON:0010133,7.28e-34,8;UBERON:0001444,8.74e-31,11;UBERON:0000020,3.67e-28,12;UBERON:0001032,3.67e-28,12;UBERON:0004456,3.67e-28,12;UBERON:0001894,5.37e-27,10;UBERON:0006222,5.37e-27,10;UBERON:0000033,6.09e-26,13;UBERON:0005085,6.09e-26,13;UBERON:0003056,1.24e-23,49;UBERON:0002346,1.11e-17,64;UBERON:0003075,1.11e-17,64;UBERON:0007284,1.11e-17,64;UBERON:0010371,2.80e-15,73;UBERON:0010314,9.76e-12,92;UBERON:0004121,2.63e-11,95;UBERON:0000924,2.63e-11,95;UBERON:0006601,2.63e-11,95;UBERON:0007811,7.58e-09,36;UBERON:0000153,2.92e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,2.73252930221678,1.14951052216736,1.0803727788321,1.20563854268572,2.38127747029647,2.17793324484245,4.02917415606834,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10659408630682,0.900305470156551,1.94038025674132,3.00071849044229,2.30542303734956,3.56737635204141,2.63278432963394,1.8267896946876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr12:74039853..74039857,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2041 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:74039853..74039857,- | |||
|id=chr12:74039853..74039857,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!2.23e-19!9;UBERON:0000019!2.23e-19!9;UBERON:0000047!2.23e-19!9;UBERON:0004088!2.23e-19!9;UBERON:0002104!2.23e-19!9;UBERON:0001456!2.23e-19!9;UBERON:0003072!2.23e-19!9;UBERON:0003071!2.23e-19!9;UBERON:0004128!2.23e-19!9;UBERON:0000007!6.48e-18!8;UBERON:0003296!6.48e-18!8;UBERON:0010133!6.48e-18!8;UBERON:0001444!1.72e-15!11;UBERON:0000020!4.93e-14!12;UBERON:0001032!4.93e-14!12;UBERON:0004456!4.93e-14!12;UBERON:0001894!5.38e-14!10;UBERON:0006222!5.38e-14!10;UBERON:0005085!8.41e-13!13;UBERON:0003056!9.04e-11!49;UBERON:0000033!2.22e-07!63;UBERON:0002346!7.45e-07!71;UBERON:0003075!7.45e-07!71;UBERON:0007284!7.45e-07!71;UBERON:0005418!9.81e-07!5;UBERON:0002472!9.81e-07!5;UBERON:0008784!9.81e-07!5;UBERON:0006058!9.81e-07!5;UBERON:0004709!9.81e-07!5;UBERON:0005420!9.81e-07!5;UBERON:0006057!9.81e-07!5;UBERON:0000978!9.81e-07!5;UBERON:0002103!9.81e-07!5;UBERON:0000376!9.81e-07!5;UBERON:0000154!9.81e-07!5;UBERON:0005730!9.81e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,8.98e-38,9;UBERON:0000019,8.98e-38,9;UBERON:0000047,8.98e-38,9;UBERON:0010312,8.98e-38,9;UBERON:0004088,8.98e-38,9;UBERON:0002104,8.98e-38,9;UBERON:0001456,8.98e-38,9;UBERON:0003072,8.98e-38,9;UBERON:0004128,8.98e-38,9;UBERON:0003071,8.98e-38,9;UBERON:0000007,7.28e-34,8;UBERON:0003296,7.28e-34,8;UBERON:0010133,7.28e-34,8;UBERON:0001444,8.74e-31,11;UBERON:0000020,3.67e-28,12;UBERON:0001032,3.67e-28,12;UBERON:0004456,3.67e-28,12;UBERON:0001894,5.37e-27,10;UBERON:0006222,5.37e-27,10;UBERON:0000033,6.09e-26,13;UBERON:0005085,6.09e-26,13;UBERON:0003056,1.24e-23,49;UBERON:0002346,1.11e-17,64;UBERON:0003075,1.11e-17,64;UBERON:0007284,1.11e-17,64;UBERON:0010371,2.80e-15,73;UBERON:0010314,9.76e-12,92;UBERON:0004121,2.63e-11,95;UBERON:0000924,2.63e-11,95;UBERON:0006601,2.63e-11,95;UBERON:0007811,7.58e-09,36;UBERON:0000153,2.92e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,2.73252930221678,1.14951052216736,1.0803727788321,1.20563854268572,2.38127747029647,2.17793324484245,4.02917415606834,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10659408630682,0.900305470156551,1.94038025674132,3.00071849044229,2.30542303734956,3.56737635204141,2.63278432963394,1.8267896946876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr12:74039853..74039857,- | |||
}} |
Revision as of 23:08, 12 September 2013
Short description: | p@chr12:74039853..74039857, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:74039853..74039857, - |
Coexpression cluster: | MCL_coexpression_mm9:2041 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 8.98e-38 | 9 |
camera-type eye | 8.98e-38 | 9 |
simple eye | 8.98e-38 | 9 |
immature eye | 8.98e-38 | 9 |
ocular region | 8.98e-38 | 9 |
visual system | 8.98e-38 | 9 |
face | 8.98e-38 | 9 |
optic cup | 8.98e-38 | 9 |
optic vesicle | 8.98e-38 | 9 |
eye primordium | 8.98e-38 | 9 |
pituitary gland | 7.28e-34 | 8 |
gland of diencephalon | 7.28e-34 | 8 |
neuroendocrine gland | 7.28e-34 | 8 |
subdivision of head | 8.74e-31 | 11 |
sense organ | 3.67e-28 | 12 |
sensory system | 3.67e-28 | 12 |
entire sense organ system | 3.67e-28 | 12 |
diencephalon | 5.37e-27 | 10 |
future diencephalon | 5.37e-27 | 10 |
head | 6.09e-26 | 13 |
ectodermal placode | 6.09e-26 | 13 |
pre-chordal neural plate | 1.24e-23 | 49 |
neurectoderm | 1.11e-17 | 64 |
neural plate | 1.11e-17 | 64 |
presumptive neural plate | 1.11e-17 | 64 |
ecto-epithelium | 2.80e-15 | 73 |
structure with developmental contribution from neural crest | 9.76e-12 | 92 |
ectoderm-derived structure | 2.63e-11 | 95 |
ectoderm | 2.63e-11 | 95 |
presumptive ectoderm | 2.63e-11 | 95 |
craniocervical region | 7.58e-09 | 36 |
anterior region of body | 2.92e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.