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FFCP PHASE1:Mm9::chr3:68808891..68808943,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=70099|HGNC=|MCL_coexpression_id=156|UniProt=E9Q2X6,Q3U763,D6RCX2,Q8CG47,Q3UZJ7,Q6P7V9|association_with_transcript=0bp_to_ENSMUST00000107803,ENSMUST00000136502,ENSMUST00000148385,NM_133786,uc008ply.1,uc008plz.1,uc008pma.1,uc008pmb.1_5end|description=CAGE_peak_1_at_Smc4_5end|id=chr3:68808891..68808943,+|ontology_enrichment_celltype=CL:0000988!2.32e-08!32;CL:0002032!2.32e-08!32;CL:0000037!2.32e-08!32;CL:0000566!2.32e-08!32;CL:0000837!2.32e-08!32|ontology_enrichment_celltype_v019_2=CL:0000988,2.32e-08,32;CL:0002032,2.32e-08,32;CL:0000037,2.32e-08,32;CL:0000837,2.32e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!8.17e-11!29;UBERON:0002193!5.71e-10!48;UBERON:0002390!5.96e-10!45;UBERON:0003061!5.96e-10!45;UBERON:0002405!9.49e-09!70;UBERON:0001048!2.07e-08!147;UBERON:0005057!2.67e-08!51;UBERON:0002370!3.16e-08!23;UBERON:0000974!3.16e-08!23;UBERON:0004807!3.16e-08!23;UBERON:0005058!3.16e-08!23;UBERON:0003351!3.16e-08!23;UBERON:0009113!3.16e-08!23;UBERON:0003295!3.16e-08!23;UBERON:0009722!3.16e-08!23;UBERON:0005562!3.16e-08!23;UBERON:0007690!3.16e-08!23;UBERON:0006562!1.71e-07!24;UBERON:0001557!1.71e-07!24;UBERON:0001042!1.71e-07!24;UBERON:0008814!1.71e-07!24;UBERON:0009145!1.71e-07!24;UBERON:0003081!1.78e-07!88;UBERON:0003408!2.12e-07!24;UBERON:0000072!3.83e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.16e-11,29;UBERON:0005057,8.16e-11,29;UBERON:0002193,5.71e-10,48;UBERON:0002405,5.71e-10,48;UBERON:0002390,5.95e-10,45;UBERON:0003061,5.95e-10,45;UBERON:0001048,4.90e-09,134;UBERON:0002370,3.16e-08,23;UBERON:0000974,3.16e-08,23;UBERON:0004807,3.16e-08,23;UBERON:0005058,3.16e-08,23;UBERON:0003351,3.16e-08,23;UBERON:0009113,3.16e-08,23;UBERON:0003295,3.16e-08,23;UBERON:0009722,3.16e-08,23;UBERON:0005562,3.16e-08,23;UBERON:0007690,3.16e-08,23;UBERON:0006562,1.71e-07,24;UBERON:0001557,1.71e-07,24;UBERON:0001042,1.71e-07,24;UBERON:0008814,1.71e-07,24;UBERON:0009145,1.71e-07,24;UBERON:0003408,2.12e-07,24;UBERON:0000072,3.83e-07,27;UBERON:0003081,3.91e-07,87;UBERON:0000077,5.89e-07,35|phase1_expression=10.089377367602,7.32848356042658,5.45999087267443,5.14189159221611,5.00895729946347,29.3788725845807,24.2957146219347,125.507870385212,42.658982811955,34.1734208430111,16.608142917874,14.1994443011699,70.1922992717944,69.1495383134269,85.2760990248097,103.059911101421,150.405803797552,34.2276449413688,33.593036233406,28.00971701867,58.7649134943892,31.7731043842833,34.7395719554784,15.8392498565473,14.9116032693661,5.7423196411502,13.3536218809313,14.8675150553263,11.5914285868388,20.1624103807945,13.082100128663,37.4668097341182,37.5189520426588,63.3926724061755,34.9510459899042,27.5949511295097,31.4420808644048,53.1535171035873,64.0694982509516,56.0170406051964,40.58797267414,60.1080026763432,52.9206284803957,5.5394599909254,2.23029248682932,2.9367480345869,3.12956537739216,8.28495594245697,1.75748946187577,1.74986909166855,4.05960622713551,2.87505128729943,26.8452169692378,62.3811442129756,74.9489172087695,8.7468208252222,12.0344044774278,5.15672092277442,3.43937983461316,1.5869729378161,2.53532561402472,3.04960078862219,2.66788438833342,6.74924787961049,1.97773272513395,7.104801149461,6.5912024314049,5.76327457982332,10.0578923939223,6.75029691658453,7.57169860864975,2.57085885963423,1.98781686856452,10.779190330916,10.4471563409878,8.27296907949019,3.30347642998166,1.40456071893706,1.53606533256243,1.45074916503213,2.28719109006024,0.52091337055676,0.837548997004143,1.68828783009504,1.22238598221448,6.77645746589436,5.26775218956681,2.42319279572891,6.20954785332109,25.3920441958799,9.85539261585705,6.88339101585109,2.03991400112325,3.77792234146472,0.649776417447669,4.03224198387602,16.8533304158102,30.1661670963162,24.1600984280668,21.5537140451308,6.33795388995062,29.5150898052931,7.64415719119937,14.2213340630666,20.7831399370766,18.4952701796822,17.6933555755174,20.3247305899927,56.4484586350834,3.71105347662062,21.685665845767,10.9607572192371,14.0675453326196,14.6200961336044,13.4051126134703,9.29932775839599,7.91023896749996,4.33798070759735,53.0766331169925,23.6179600923217,46.1558773582222,43.63877278217,0,3.22058876712702,1.8850203613211,10.9846533739694,62.3038647430785,44.9927048245056,50.9551610562989,1.49790639404823,2.28750301409313,5.40313714085317,0.521472960576829,1.79000820131231,0.83115217823824,1.62241263067758,17.9237280376557,32.5946262998444,5.05445516867349,4.20883711772948,26.0240885925407,25.289231487682,27.1893816006077,24.5648853072216,29.3237311342223,34.8469319174791,29.6097449608743,4.65666067330228,15.3053274982318,37.632109953396,26.3926686245923,23.6731391021781,19.1852601965663,26.4671646556847,19.9608672315705,21.6947350832158,40.0261516768544,57.1312353794668,61.379315869448,35.4185071035708,28.8467053776748,30.6105504483725,45.2182444967752,33.6466836288061,37.6411755445203,31.8571504308059,39.1679166043444,33.5116532593776,26.4941358360704,13.9542344467231,9.32291309777341,6.578999434139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|EntrezGene=70099
|HGNC=
|MCL_coexpression_id=156
|UniProt=E9Q2X6,Q3U763,D6RCX2,Q8CG47,Q3UZJ7,Q6P7V9
|association_with_transcript=0bp_to_ENSMUST00000107803,ENSMUST00000136502,ENSMUST00000148385,NM_133786,uc008ply.1,uc008plz.1,uc008pma.1,uc008pmb.1_5end
|description=CAGE_peak_1_at_Smc4_5end
|id=chr3:68808891..68808943,+
|ontology_enrichment_celltype=CL:0000988!2.32e-08!32;CL:0002032!2.32e-08!32;CL:0000037!2.32e-08!32;CL:0000566!2.32e-08!32;CL:0000837!2.32e-08!32
|ontology_enrichment_celltype_v019_2=CL:0000988,2.32e-08,32;CL:0002032,2.32e-08,32;CL:0000037,2.32e-08,32;CL:0000837,2.32e-08,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!8.17e-11!29;UBERON:0002193!5.71e-10!48;UBERON:0002390!5.96e-10!45;UBERON:0003061!5.96e-10!45;UBERON:0002405!9.49e-09!70;UBERON:0001048!2.07e-08!147;UBERON:0005057!2.67e-08!51;UBERON:0002370!3.16e-08!23;UBERON:0000974!3.16e-08!23;UBERON:0004807!3.16e-08!23;UBERON:0005058!3.16e-08!23;UBERON:0003351!3.16e-08!23;UBERON:0009113!3.16e-08!23;UBERON:0003295!3.16e-08!23;UBERON:0009722!3.16e-08!23;UBERON:0005562!3.16e-08!23;UBERON:0007690!3.16e-08!23;UBERON:0006562!1.71e-07!24;UBERON:0001557!1.71e-07!24;UBERON:0001042!1.71e-07!24;UBERON:0008814!1.71e-07!24;UBERON:0009145!1.71e-07!24;UBERON:0003081!1.78e-07!88;UBERON:0003408!2.12e-07!24;UBERON:0000072!3.83e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.16e-11,29;UBERON:0005057,8.16e-11,29;UBERON:0002193,5.71e-10,48;UBERON:0002405,5.71e-10,48;UBERON:0002390,5.95e-10,45;UBERON:0003061,5.95e-10,45;UBERON:0001048,4.90e-09,134;UBERON:0002370,3.16e-08,23;UBERON:0000974,3.16e-08,23;UBERON:0004807,3.16e-08,23;UBERON:0005058,3.16e-08,23;UBERON:0003351,3.16e-08,23;UBERON:0009113,3.16e-08,23;UBERON:0003295,3.16e-08,23;UBERON:0009722,3.16e-08,23;UBERON:0005562,3.16e-08,23;UBERON:0007690,3.16e-08,23;UBERON:0006562,1.71e-07,24;UBERON:0001557,1.71e-07,24;UBERON:0001042,1.71e-07,24;UBERON:0008814,1.71e-07,24;UBERON:0009145,1.71e-07,24;UBERON:0003408,2.12e-07,24;UBERON:0000072,3.83e-07,27;UBERON:0003081,3.91e-07,87;UBERON:0000077,5.89e-07,35
|phase1_expression=10.089377367602,7.32848356042658,5.45999087267443,5.14189159221611,5.00895729946347,29.3788725845807,24.2957146219347,125.507870385212,42.658982811955,34.1734208430111,16.608142917874,14.1994443011699,70.1922992717944,69.1495383134269,85.2760990248097,103.059911101421,150.405803797552,34.2276449413688,33.593036233406,28.00971701867,58.7649134943892,31.7731043842833,34.7395719554784,15.8392498565473,14.9116032693661,5.7423196411502,13.3536218809313,14.8675150553263,11.5914285868388,20.1624103807945,13.082100128663,37.4668097341182,37.5189520426588,63.3926724061755,34.9510459899042,27.5949511295097,31.4420808644048,53.1535171035873,64.0694982509516,56.0170406051964,40.58797267414,60.1080026763432,52.9206284803957,5.5394599909254,2.23029248682932,2.9367480345869,3.12956537739216,8.28495594245697,1.75748946187577,1.74986909166855,4.05960622713551,2.87505128729943,26.8452169692378,62.3811442129756,74.9489172087695,8.7468208252222,12.0344044774278,5.15672092277442,3.43937983461316,1.5869729378161,2.53532561402472,3.04960078862219,2.66788438833342,6.74924787961049,1.97773272513395,7.104801149461,6.5912024314049,5.76327457982332,10.0578923939223,6.75029691658453,7.57169860864975,2.57085885963423,1.98781686856452,10.779190330916,10.4471563409878,8.27296907949019,3.30347642998166,1.40456071893706,1.53606533256243,1.45074916503213,2.28719109006024,0.52091337055676,0.837548997004143,1.68828783009504,1.22238598221448,6.77645746589436,5.26775218956681,2.42319279572891,6.20954785332109,25.3920441958799,9.85539261585705,6.88339101585109,2.03991400112325,3.77792234146472,0.649776417447669,4.03224198387602,16.8533304158102,30.1661670963162,24.1600984280668,21.5537140451308,6.33795388995062,29.5150898052931,7.64415719119937,14.2213340630666,20.7831399370766,18.4952701796822,17.6933555755174,20.3247305899927,56.4484586350834,3.71105347662062,21.685665845767,10.9607572192371,14.0675453326196,14.6200961336044,13.4051126134703,9.29932775839599,7.91023896749996,4.33798070759735,53.0766331169925,23.6179600923217,46.1558773582222,43.63877278217,0,3.22058876712702,1.8850203613211,10.9846533739694,62.3038647430785,44.9927048245056,50.9551610562989,1.49790639404823,2.28750301409313,5.40313714085317,0.521472960576829,1.79000820131231,0.83115217823824,1.62241263067758,17.9237280376557,32.5946262998444,5.05445516867349,4.20883711772948,26.0240885925407,25.289231487682,27.1893816006077,24.5648853072216,29.3237311342223,34.8469319174791,29.6097449608743,4.65666067330228,15.3053274982318,37.632109953396,26.3926686245923,23.6731391021781,19.1852601965663,26.4671646556847,19.9608672315705,21.6947350832158,40.0261516768544,57.1312353794668,61.379315869448,35.4185071035708,28.8467053776748,30.6105504483725,45.2182444967752,33.6466836288061,37.6411755445203,31.8571504308059,39.1679166043444,33.5116532593776,26.4941358360704,13.9542344467231,9.32291309777341,6.57899943413995,7.90380415047782,8.58921080066379,0.841159794256509,6.99751364179134,2.31293148088659,11.9002754998595,24.1015723104814,29.2618206544153,35.6962867862199,26.2188582010345,17.5678654637448,12.7451169495415,17.5575752771469,8.39964669092456,13.069430857614,13.3300836267571,10.3330966173134,12.5834717211591,14.0489732418551,13.1433240347882,13.0870851657626,27.5338915389446,22.5415471346161,24.641810669283,16.2920089220806,16.4117818543345,13.4061458703425,7.0852871030209,8.47793130343424,6.41665252393363,3.85388415213294,62.4000695378192,48.1569538027347,73.0801865250775,58.2208548385003,52.5766208260269,36.1568709529616,41.7159399303675,33.7241271692074,32.1236853430055,89.1362880469598,19.3513292787622,16.5379966750717,9.59799736199025,13.9929982547091,5.78932225636041,8.12914036733061,31.26608294213,40.7412441105065,33.9490171550376,33.5607055052558,29.983620082085,17.853273066451,12.2934198150413,20.4925687338048,17.2742457926044,15.6265673284337,7.53771247692395,13.9874835311375,11.5719246865209,7.53956419696361,9.24639662491806,9.83528546038072,10.2096596132751,1.12385412991454,1.64096361229084,33.6066638022185,8.83648245215305,25.2406575533005,21.0836921920185,22.1886099664783,16.010909462821,15.1503098376028,12.4553673547086,20.2405350837447,13.151513606009,12.6492088942888,1.92792789853084,11.071326646245,12.6426578603751,16.7773568134183,7.9185659026817,5.30980553359851,20.6363540731734,24.1858845571801,20.5579536933929,5.02013217897314,13.2197113615889,11.1124166062335,21.4484900391728,21.0333453246986,9.16506598013866,8.4334886859999,16.5016869197099,5.7874732978144,23.9481255061643,3.88076051348264,12.2172109968008,14.0098784577396,11.9507107793387,10.6956863391379,2.74018454203139,15.0189893160775,1.90648863777438,2.20528398054962,20.610781617685,17.7610869365496,26.6583128182449,24.9488198966555,19.8610488691524,15.4484843413821,1.66882771809459,46.8186213386116,23.7344898157706,39.816823384488,86.4611217651532,92.405297939413,72.5226809064677,34.1656644287649,39.8861639122425,35.5173932677369,5.72802370809068,27.5212314415588,33.9543510101837,21.4930628235385,25.0905955217362,13.9752040797554,21.038838036032,14.8776220305605,9.94672579539312,11.0172727298024,4.34937519160848,217.021781393413,27.6605610181361,17.3731414979952,23.5285937896298,20.1489324625261,28.21567295696,22.1805181040475,23.436789271911,28.2071636505162,134.803939420911,147.183333197769,54.3539127480467,22.9079493277886,36.3596788363488,51.7084875451624,73.4009452236674,68.9424301090989,79.4491921326994,74.7309007503361,85.8214824559255,85.2754166469448,81.8708623311145,77.3815573073634,81.2027943444381,69.7755106023967,6.34845074122592,42.3993170944464,38.666672198684,38.9492309964662,6.18206700903009,8.25802891985201,6.95976172215607,6.21668299329291,3.00943262421218,1.12950368523413,1.84130094602871,2.86447756719698,2.06223818812425,2.74033007908257,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,1.03552062350364,38.0899565633928,32.7200396188845,17.9270286041841,29.1728060481953,23.0574478890781,17.8328203196514,14.6682840349066,18.3371200942616,11.8740107548972,15.1618327058278,14.7017993936339,16.9763707247469,24.4404334496393,23.6252812373968,24.0080260234463,22.8620971815875,23.8721711446402,24.8852894398179,22.6647245441819,21.3438434194876,16.8005933668854,18.4574838405711,23.3667466148375,15.8427594129238,20.7040636913727,18.1075260888188,16.097661612804,18.1518100892112,18.8767718245748,17.3954104213899,18.0325227548745,18.7158516513571,25.3723246765207,20.2967261953615,15.8183421004536,5.24602213669686,16.609144199624,11.6030369186081,13.0076065806813,15.8825821766051,16.9263520002908
|short_description=p1@Smc4
}}

Revision as of 02:29, 14 September 2013

Short description:p1@Smc4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Smc4_5end
Coexpression cluster:MCL_coexpression_mm9:156
Association with transcript: 0bp_to_ENSMUST00000107803, ENSMUST00000136502, ENSMUST00000148385, NM_133786, uc008ply.1, uc008plz.1, uc008pma.1, uc008pmb.1_5end
EntrezGene:Smc4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Smc4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I729.38
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I824.30
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9125.51
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E742.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F234.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E616.61
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F114.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E470.19
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E869.15
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A185.28
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3103.06
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5150.41
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A234.23
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A433.59
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A628.01
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A358.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H231.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I934.74
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.91
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I113.35
GP2+ M cell, pool3.CNhs13240.11847-124I214.87
Ileum epithelium, pool1.CNhs13199.10252-104B911.59
Ileum epithelium, pool2.CNhs13232.10253-104C120.16
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I337.47
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G637.52
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E963.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F534.95
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F627.59
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F731.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G853.15
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H164.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H356.02
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G940.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H260.11
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H452.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.54
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.28
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A226.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I962.38
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A174.95
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.75
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.06
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.75
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D96.21
Mouse Schwann, donor2.CNhs12573.11746-123F925.39
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.86
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A716.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I730.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E324.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I821.55
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.34
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H129.52
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G120.78
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G218.50
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.69
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B620.32
accessory axillary lymph node, adult.CNhs10475.1063-29H956.45
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C521.69
adrenal gland, embryo E16.CNhs11004.1254-43D610.96
adrenal gland, embryo E17.CNhs11043.1263-45I114.07
adrenal gland, embryo E18.CNhs11026.1262-18F514.62
adrenal gland, neonate N00.CNhs11191.1311-23C113.41
adrenal gland, neonate N25.CNhs11223.1377-27I39.30
amnion, adult pregnant day17.5.CNhs10488.583-22A87.91
aorta, adult.CNhs10498.46-23H14.34
bone (os femoris), adult.CNhs10483.56-12G253.08
bone (os femoris), neonate N02.CNhs11227.1985-43F523.62
bone (os femoris), neonate N16.CNhs11225.1525-43A646.16
bone (os femoris), neonate N20.CNhs11195.1350-25C343.64
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H710.98
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C762.30
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D144.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D450.96
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F15.40
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A232.59
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C626.02
eyeball, embryo E14.CNhs10521.399-16E225.29
eyeball, embryo E15.CNhs10593.426-16C927.19
eyeball, embryo E17.CNhs11023.1261-18D424.56
eyeball, neonate N00.CNhs11207.633-15C629.32
eyeball, neonate N01.CNhs11140.1532-43E734.85
eyeball, neonate N02.CNhs11205.1551-44G829.61
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E215.31
forelimb, embryo E12.CNhs10600.359-14H237.63
forelimb, embryo E13.CNhs10589.384-1E226.39
forelimb, embryo E14.CNhs10577.413-26A823.67
forelimb, embryo E15.CNhs11007.437-20E719.19
forelimb, embryo E17.CNhs10598.1517-43C426.47
forelimb, embryo E18.CNhs11008.1520-43B519.96
gonad, embryo E13.CNhs11044.1564-45I621.69
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C840.03
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D257.13
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D561.38
heart, embryo E11.CNhs10586.331-24E935.42
heart, embryo E12.CNhs11015.353-12F528.85
heart, embryo E13.CNhs11013.376-3I930.61
heart, embryo E14.CNhs10597.403-26D445.22
heart, embryo E15.CNhs11017.431-16C833.65
heart, embryo E16.CNhs11021.457-17C637.64
heart, embryo E17.CNhs11025.479-18E531.86
heart, embryo E18.CNhs11030.1283-20G339.17
heart, neonate N00.CNhs11213.639-21E333.51
heart, neonate N03.CNhs11221.1349-25I226.49
heart, neonate N10.CNhs11118.749-24G113.95
heart, neonate N16.CNhs11209.782-15G19.32
heart, neonate N20.CNhs11127.821-26I66.58
heart, neonate N25.CNhs11196.1351-25D37.90
heart, neonate N30.CNhs11202.1390-42D28.59
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G17.00
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A311.90
intestine, embryo E12.CNhs11019.1251-16I524.10
intestine, embryo E13.CNhs11010.381-16D529.26
intestine, embryo E15.CNhs10602.976-16D835.70
intestine, embryo E16.CNhs10585.463-22H426.22
intestine, embryo E17.CNhs10582.482-18D317.57
intestine, embryo E18.CNhs10526.1289-20F712.75
intestine, neonate N00.CNhs11126.644-26D117.56
intestine, neonate N01.CNhs11192.1322-23E98.40
intestine, neonate N06.CNhs11102.688-20B813.07
intestine, neonate N07.CNhs11095.720-20F213.33
intestine, neonate N10.CNhs11098.755-23A510.33
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E314.05
intestine, neonate N30.CNhs11131.1384-42G113.14
kidney, embryo E14.CNhs10606.411-4I913.09
kidney, embryo E15.CNhs10997.434-16F827.53
kidney, embryo E16.CNhs10584.464-22A522.54
kidney, embryo E17.CNhs11028.483-18I224.64
kidney, embryo E18.CNhs11001.1288-20C716.29
kidney, neonate N00.CNhs11214.646-21G716.41
kidney, neonate N10.CNhs11206.758-6D513.41
kidney, neonate N20.CNhs11113.832-19I17.09
kidney, neonate N25.CNhs11122.1353-25F38.48
kidney, neonate N30.CNhs11203.1385-42H16.42
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F862.40
liver, embryo E13.CNhs10524.378-3H648.16
liver, embryo E14.CNhs10594.409-16E173.08
liver, embryo E15.CNhs10520.433-16D758.22
liver, embryo E16.CNhs10523.462-17F552.58
liver, embryo E17.CNhs10510.481-18A336.16
liver, embryo E18.CNhs10579.499-43G441.72
liver, neonate N00.CNhs11117.641-24F433.72
liver, neonate N03.CNhs11123.1345-25G232.12
liver, neonate N06.CNhs11101.684-20A889.14
liver, neonate N07.CNhs11103.716-20H219.35
liver, neonate N10.CNhs11115.751-24B916.54
liver, neonate N20.CNhs11220.823-25A39.60
liver, neonate N25.CNhs11198.1368-26H113.99
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B18.13
lung, embryo E12.CNhs10522.354-16G231.27
lung, embryo E14.CNhs10604.404-26F840.74
lung, embryo E15.CNhs11020.432-17C533.95
lung, embryo E16.CNhs10998.458-17B633.56
lung, embryo E17.CNhs10605.480-44A629.98
lung, embryo E18.CNhs10583.1287-20I617.85
lung, neonate N00.CNhs11224.640-42C612.29
lung, neonate N06.CNhs11212.683-20E520.49
lung, neonate N07.CNhs11111.715-19A317.27
lung, neonate N10.CNhs11219.750-23E615.63
lung, neonate N20.CNhs11109.822-18A47.54
lung, neonate N25.CNhs11119.1359-25C713.99
lung, neonate N30.CNhs11133.1394-42H211.57
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.25
mammary gland, adult lactating day02.CNhs10480.595-22B69.84
mammary gland, adult pregnant day19.CNhs10476.588-5H210.21
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C733.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.84
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E125.24
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.01
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.15
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D420.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.15
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.65
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I711.07
ovary, embryo E18.CNhs11040.505-44H712.64
ovary, neonate N00.CNhs11217.1299-22I416.78
oviduct, adult pregnant day01.CNhs10500.988-6G67.92
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F420.64
pancreas, embryo E15.CNhs11042.1556-45F224.19
pancreas, embryo E16.CNhs11003.460-26E520.56
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I713.22
pancreas, neonate N00.CNhs11105.645-26G911.11
pancreas, neonate N01.CNhs11138.1531-43D721.45
pancreas, neonate N02.CNhs11139.1539-43D821.03
pancreas, neonate N16.CNhs11136.787-43B69.17
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E623.95
pituitary gland, embryo E13.CNhs11009.370-44C73.88
pituitary gland, embryo E14.CNhs11037.398-44A512.22
pituitary gland, embryo E15.CNhs10592.427-16B914.01
pituitary gland, embryo E16.CNhs11036.449-43F611.95
pituitary gland, embryo E17.CNhs11039.1265-44F510.70
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I715.02
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C320.61
skin, neonate N00.CNhs11124.650-25G417.76
skin, neonate N03.CNhs11215.662-22H326.66
skin, neonate N06.CNhs11097.693-20I524.95
skin, neonate N10.CNhs11108.762-6C419.86
small intestine, neonate N16.CNhs11114.790-21I115.45
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G246.82
spleen, embryo E16.CNhs11035.461-43C123.73
spleen, embryo E18.CNhs11011.1271-21F239.82
spleen, neonate N10.CNhs11116.752-24D186.46
spleen, neonate N20.CNhs11112.824-19H192.41
spleen, neonate N25.CNhs11099.1354-25G372.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C634.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C939.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D335.52
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E327.52
stomach, embryo E15.CNhs10603.1252-16G833.95
stomach, embryo E16.CNhs11022.459-17D421.49
stomach, embryo E17.CNhs11006.1035-18D525.09
stomach, embryo E18.CNhs10999.1286-20C613.98
stomach, neonate N03.CNhs11193.1340-24B821.04
stomach, neonate N07.CNhs11210.718-18A914.88
stomach, neonate N25.CNhs11104.1355-25E49.95
stomach, neonate N30.CNhs11134.1386-42I111.02
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G5217.02
testis, embryo E13.CNhs11031.389-23F527.66
testis, embryo E15.CNhs11034.443-27C517.37
testis, embryo E16.CNhs11033.470-26G523.53
testis, embryo E17.CNhs11029.486-18I520.15
testis, embryo E18.CNhs11027.503-18G528.22
testis, neonate N00.CNhs11189.1300-22B722.18
testis, neonate N07.CNhs11222.726-26I423.44
testis, neonate N10.CNhs11204.763-44D928.21
testis, neonate N20.CNhs11110.839-18H3134.80
testis, neonate N30.CNhs11130.1391-42E2147.18
thymus, adult.CNhs10471.38-12B554.35
thymus, embryo E14.CNhs11041.402-44I422.91
thymus, embryo E15.CNhs11005.430-45I236.36
thymus, embryo E16.CNhs11002.456-26C551.71
thymus, embryo E17.CNhs10581.478-18C173.40
thymus, embryo E18.CNhs10595.1273-19G468.94
thymus, neonate N02.CNhs11181.1541-43F879.45
thymus, neonate N03.CNhs11137.2104-43C774.73
thymus, neonate N06.CNhs11197.681-26C485.82
thymus, neonate N07.CNhs11211.713-19D385.28
thymus, neonate N10.CNhs11194.748-24E481.87
thymus, neonate N20.CNhs11186.820-7A277.38
thymus, neonate N25.CNhs11125.1362-25G781.20
thymus, neonate N30.CNhs11132.1393-42G269.78
tongue, adult.CNhs10499.32-1B46.35
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H342.40
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F738.67
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G538.95
urinary bladder, adult.CNhs10481.879-12E46.18
uterus, adult pregnant day19.CNhs10497.590-15F58.26
uterus, adult.CNhs10509.92-27E56.96
vagina, adult.CNhs10502.89-27D56.22
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I838.09
whole body, embryo E12.CNhs10587.857-27C932.72
whole body, embryo E13.CNhs10512.372-23H217.93
whole body, embryo E14.5.CNhs10578.420-27D229.17
whole body, embryo E14.CNhs10519.395-14B123.06
whole body, embryo E16.CNhs10514.453-14F217.83
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.34
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.16
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.70
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G524.44
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G523.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G524.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G522.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G523.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G524.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G521.34
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.46
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G523.37
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.84
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.70
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.11
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.88
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G518.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.72
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G525.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.30
whole body, embryo E17.5.CNhs10513.490-9F915.82
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B316.61
whole body, neonate N00.CNhs10525.657-19C211.60
whole body, neonate N01.CNhs10576.659-23C613.01
whole body, neonate N06.CNhs10515.692-21D115.88
whole body, neonate N10.CNhs10518.761-6B416.93





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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