FFCP PHASE1:Mm9::chr3:96637141..96637180,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=59020|HGNC=|MCL_coexpression_id=11|UniProt=D3Z114|association_with_transcript=0bp_to_ENSMUST00000128789_5end|description=CAGE_peak_4_at_Pdzk1_5end|id=chr3:96637141..96637180,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!3.58e-17!14;UBERON:0003918!3.58e-17!14;UBERON:0005095!3.58e-17!14;UBERON:0007687!3.58e-17!14;UBERON:0006554!1.72e-14!16;UBERON:0001008!2.16e-13!17;UBERON:0000489!4.59e-10!21|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.67e-50,14;UBERON:0003918,1.67e-50,14;UBERON:0011143,1.67e-50,14;UBERON:0005095,1.67e-50,14;UBERON:0007687,1.67e-50,14;UBERON:0006554,4.87e-39,18;UBERON:0001008,6.33e-37,19;UBERON:0000489,2.67e-33,21;UBERON:0003103,1.26e-15,43;UBERON:0005172,1.50e-13,49;UBERON:0005173,1.50e-13,49;UBERON:0002417,1.50e-13,49;UBERON:0000916,1.50e-13,49;UBERON:0003104,1.29e-10,61;UBERON:0009142,1.29e-10,61;UBERON:0009569,1.05e-09,66;UBERON:0001301,1.11e-08,3;UBERON:0006555,1.11e-08,3;UBERON:0005103,1.11e-08,3;UBERON:0000083,1.11e-08,3;UBERON:0009201,1.11e-08,3;UBERON:0004819,1.11e-08,3;UBERON:0006553,1.11e-08,3;UBERON:0003074,1.11e-08,3;UBERON:0003060,1.11e-08,3;UBERON:0005177,7.19e-08,79;UBERON:0002100,9.98e-07,90|phase1_expression=0,0,0,0.60492842261366,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,2.21112554392781,0,0,0.159992422793407,0,0.57423196411502,0.430761996159075,0.215471232685889,0.570070258369122,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,1.45653105909346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,1.49288364732112,11.3725241295154,0,0.390361328888111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.597423819763102,0.948339504765408,3.08470984046268,6.76246414038483,7.33144780243131,11.6371492300575,7.78507600782536,19.7930361198925,29.3744194479408,27.7887748279233,22.9518724894549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0.299033092087958,1.65458490457098,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0,0,0.201652370273681,0.38983152295901,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.243106717068294,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0,0.294397840268795,0,0,0,0.290692833264657,0.188218760830661,0.338458431566706,0.548783918618318,0.263069711437843,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0,0,0.220591419119515,0|short_description=p4@Pdzk1}} | ||
|EntrezGene=59020 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|UniProt=D3Z114 | |||
|association_with_transcript=0bp_to_ENSMUST00000128789_5end | |||
|description=CAGE_peak_4_at_Pdzk1_5end | |||
|id=chr3:96637141..96637180,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!3.58e-17!14;UBERON:0003918!3.58e-17!14;UBERON:0005095!3.58e-17!14;UBERON:0007687!3.58e-17!14;UBERON:0006554!1.72e-14!16;UBERON:0001008!2.16e-13!17;UBERON:0000489!4.59e-10!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.67e-50,14;UBERON:0003918,1.67e-50,14;UBERON:0011143,1.67e-50,14;UBERON:0005095,1.67e-50,14;UBERON:0007687,1.67e-50,14;UBERON:0006554,4.87e-39,18;UBERON:0001008,6.33e-37,19;UBERON:0000489,2.67e-33,21;UBERON:0003103,1.26e-15,43;UBERON:0005172,1.50e-13,49;UBERON:0005173,1.50e-13,49;UBERON:0002417,1.50e-13,49;UBERON:0000916,1.50e-13,49;UBERON:0003104,1.29e-10,61;UBERON:0009142,1.29e-10,61;UBERON:0009569,1.05e-09,66;UBERON:0001301,1.11e-08,3;UBERON:0006555,1.11e-08,3;UBERON:0005103,1.11e-08,3;UBERON:0000083,1.11e-08,3;UBERON:0009201,1.11e-08,3;UBERON:0004819,1.11e-08,3;UBERON:0006553,1.11e-08,3;UBERON:0003074,1.11e-08,3;UBERON:0003060,1.11e-08,3;UBERON:0005177,7.19e-08,79;UBERON:0002100,9.98e-07,90 | |||
|phase1_expression=0,0,0,0.60492842261366,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,2.21112554392781,0,0,0.159992422793407,0,0.57423196411502,0.430761996159075,0.215471232685889,0.570070258369122,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,1.45653105909346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,1.49288364732112,11.3725241295154,0,0.390361328888111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.597423819763102,0.948339504765408,3.08470984046268,6.76246414038483,7.33144780243131,11.6371492300575,7.78507600782536,19.7930361198925,29.3744194479408,27.7887748279233,22.9518724894549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0.299033092087958,1.65458490457098,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0,0,0.201652370273681,0.38983152295901,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.243106717068294,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0,0.294397840268795,0,0,0,0.290692833264657,0.188218760830661,0.338458431566706,0.548783918618318,0.263069711437843,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p4@Pdzk1 | |||
}} |
Revision as of 03:09, 14 September 2013
Short description: | p4@Pdzk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pdzk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_ENSMUST00000128789_5end |
EntrezGene: | Pdzk1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.67e-50 | 14 |
kidney mesenchyme | 1.67e-50 | 14 |
upper urinary tract | 1.67e-50 | 14 |
kidney rudiment | 1.67e-50 | 14 |
kidney field | 1.67e-50 | 14 |
urinary system structure | 4.87e-39 | 18 |
renal system | 6.33e-37 | 19 |
cavitated compound organ | 2.67e-33 | 21 |
compound organ | 1.26e-15 | 43 |
abdomen element | 1.50e-13 | 49 |
abdominal segment element | 1.50e-13 | 49 |
abdominal segment of trunk | 1.50e-13 | 49 |
abdomen | 1.50e-13 | 49 |
mesenchyme | 1.29e-10 | 61 |
entire embryonic mesenchyme | 1.29e-10 | 61 |
subdivision of trunk | 1.05e-09 | 66 |
epididymis | 1.11e-08 | 3 |
excretory tube | 1.11e-08 | 3 |
mesonephric epithelium | 1.11e-08 | 3 |
mesonephric tubule | 1.11e-08 | 3 |
nephric duct | 1.11e-08 | 3 |
kidney epithelium | 1.11e-08 | 3 |
renal duct | 1.11e-08 | 3 |
mesonephric duct | 1.11e-08 | 3 |
pronephric duct | 1.11e-08 | 3 |
trunk region element | 7.19e-08 | 79 |
trunk | 9.98e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.