FFCP PHASE1:Mm9::chr2:84314747..84314757,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21788|HGNC=|MCL_coexpression_id=56|UniProt=O54819,A2ARA1|association_with_transcript=-416bp_to_ENSMUST00000028487,ENSMUST00000111712,NM_011576,uc008kij.1_5end|description=CAGE_peak_7_at_Tfpi_5end|id=chr2:84314747..84314757,-|ontology_enrichment_celltype=CL:0000349!2.82e-23!3;CL:0000351!2.82e-23!3|ontology_enrichment_celltype_v019_2=CL:0000349,5.71e-11,3;CL:0000351,5.71e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!2.38e-23!3;UBERON:0000478!2.38e-23!3;UBERON:0000158!2.38e-23!3;UBERON:0000358!2.82e-23!3;UBERON:0000307!2.82e-23!3;UBERON:0001987!2.44e-16!2;UBERON:0003124!2.44e-16!2;UBERON:0004340!2.44e-16!2;UBERON:0004923!1.23e-14!24;UBERON:0002106!2.19e-11!6;UBERON:0004457!2.19e-11!6;UBERON:0000042!2.19e-11!6;UBERON:0004854!2.19e-11!6;UBERON:0009034!2.19e-11!6;UBERON:0002095!2.19e-11!6;UBERON:0004782!2.19e-11!6;UBERON:0003281!2.19e-11!6;UBERON:0009664!2.19e-11!6;UBERON:0002296!2.19e-11!6;UBERON:0005602!2.19e-11!6;UBERON:0001179!2.19e-11!6;UBERON:0006293!2.19e-11!6;UBERON:0000305!1.05e-08!1;UBERON:0005795!1.25e-08!4;UBERON:0000995!1.25e-08!4;UBERON:0003975!4.52e-07!5;UBERON:0003887!4.70e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.28e-58,2;UBERON:0003124,3.28e-58,2;UBERON:0004340,3.28e-58,2;UBERON:0005631,2.66e-39,3;UBERON:0000478,2.66e-39,3;UBERON:0000158,2.66e-39,3;UBERON:0005795,7.88e-30,4;UBERON:0000995,7.88e-30,4;UBERON:0003975,3.90e-24,5;UBERON:0003134,1.45e-15,8;UBERON:0004175,5.71e-14,9;UBERON:0000474,5.71e-14,9;UBERON:0003100,1.21e-11,11;UBERON:0000358,5.71e-11,3;UBERON:0000307,5.71e-11,3;UBERON:0007010,5.71e-11,3;UBERON:0006554,1.52e-07,18;UBERON:0001008,3.34e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3255551548033,1.0591603543191,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0.665957860122194,0.538283139656854,1.84673078000486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@Tfpi}} | ||
|EntrezGene=21788 | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|UniProt=O54819,A2ARA1 | |||
|association_with_transcript=-416bp_to_ENSMUST00000028487,ENSMUST00000111712,NM_011576,uc008kij.1_5end | |||
|description=CAGE_peak_7_at_Tfpi_5end | |||
|id=chr2:84314747..84314757,- | |||
|ontology_enrichment_celltype=CL:0000349!2.82e-23!3;CL:0000351!2.82e-23!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.71e-11,3;CL:0000351,5.71e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.38e-23!3;UBERON:0000478!2.38e-23!3;UBERON:0000158!2.38e-23!3;UBERON:0000358!2.82e-23!3;UBERON:0000307!2.82e-23!3;UBERON:0001987!2.44e-16!2;UBERON:0003124!2.44e-16!2;UBERON:0004340!2.44e-16!2;UBERON:0004923!1.23e-14!24;UBERON:0002106!2.19e-11!6;UBERON:0004457!2.19e-11!6;UBERON:0000042!2.19e-11!6;UBERON:0004854!2.19e-11!6;UBERON:0009034!2.19e-11!6;UBERON:0002095!2.19e-11!6;UBERON:0004782!2.19e-11!6;UBERON:0003281!2.19e-11!6;UBERON:0009664!2.19e-11!6;UBERON:0002296!2.19e-11!6;UBERON:0005602!2.19e-11!6;UBERON:0001179!2.19e-11!6;UBERON:0006293!2.19e-11!6;UBERON:0000305!1.05e-08!1;UBERON:0005795!1.25e-08!4;UBERON:0000995!1.25e-08!4;UBERON:0003975!4.52e-07!5;UBERON:0003887!4.70e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.28e-58,2;UBERON:0003124,3.28e-58,2;UBERON:0004340,3.28e-58,2;UBERON:0005631,2.66e-39,3;UBERON:0000478,2.66e-39,3;UBERON:0000158,2.66e-39,3;UBERON:0005795,7.88e-30,4;UBERON:0000995,7.88e-30,4;UBERON:0003975,3.90e-24,5;UBERON:0003134,1.45e-15,8;UBERON:0004175,5.71e-14,9;UBERON:0000474,5.71e-14,9;UBERON:0003100,1.21e-11,11;UBERON:0000358,5.71e-11,3;UBERON:0000307,5.71e-11,3;UBERON:0007010,5.71e-11,3;UBERON:0006554,1.52e-07,18;UBERON:0001008,3.34e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3255551548033,1.0591603543191,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0.665957860122194,0.538283139656854,1.84673078000486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@Tfpi | |||
}} |
Revision as of 00:46, 14 September 2013
Short description: | p7@Tfpi |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Tfpi_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | -416bp_to_ENSMUST00000028487, ENSMUST00000111712, NM_011576, uc008kij.1_5end |
EntrezGene: | Tfpi |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.71e-11 | 3 |
trophoblast cell | 5.71e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
placenta | 3.28e-58 | 2 |
chorion | 3.28e-58 | 2 |
allantois | 3.28e-58 | 2 |
extraembryonic membrane | 2.66e-39 | 3 |
extraembryonic structure | 2.66e-39 | 3 |
membranous layer | 2.66e-39 | 3 |
embryonic uterus | 7.88e-30 | 4 |
uterus | 7.88e-30 | 4 |
internal female genitalia | 3.90e-24 | 5 |
female reproductive organ | 1.45e-15 | 8 |
internal genitalia | 5.71e-14 | 9 |
female reproductive system | 5.71e-14 | 9 |
female organism | 1.21e-11 | 11 |
blastocyst | 5.71e-11 | 3 |
blastula | 5.71e-11 | 3 |
cleaving embryo | 5.71e-11 | 3 |
urinary system structure | 1.52e-07 | 18 |
renal system | 3.34e-07 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.