FFCP PHASE1:Mm9::chr10:5484221..5484225,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2563|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:5484221..5484225,-|id=chr10:5484221..5484225,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!3.31e-18!26;UBERON:0000990!3.31e-18!26;UBERON:0003133!1.63e-15!24;UBERON:0000474!3.21e-13!9;UBERON:0003134!1.77e-11!8;UBERON:0000991!2.40e-11!18;UBERON:0005564!2.40e-11!18;UBERON:0003100!1.84e-10!11;UBERON:0004176!2.71e-10!17;UBERON:0009196!2.71e-10!17;UBERON:0009117!2.71e-10!17;UBERON:0003101!6.89e-07!16;UBERON:0000079!6.89e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0003975,1.80e-39,5;UBERON:0000474,3.75e-39,9;UBERON:0003100,3.07e-32,11;UBERON:0003134,4.22e-25,8;UBERON:0000993,3.06e-23,1;UBERON:0006834,8.39e-23,1;UBERON:0005795,1.08e-22,4;UBERON:0000995,1.08e-22,4;UBERON:0000996,1.39e-22,1;UBERON:0004175,1.96e-22,9;UBERON:0005156,3.27e-14,26;UBERON:0000990,3.27e-14,26;UBERON:0003133,5.26e-09,24;UBERON:0000162,1.88e-08,3;UBERON:0001353,1.88e-08,3;UBERON:0000163,1.88e-08,3;UBERON:0006866,1.88e-08,3;UBERON:0001046,1.88e-08,3;UBERON:0000164,1.88e-08,3;UBERON:0000931,1.88e-08,3;UBERON:0007023,1.20e-07,51|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0.247194967734374,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0.509196819251581,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0,0.316182685621286,0.590440591918409,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.624075346229121,0.505157755894224,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0.35613120733451,0.977321756121456,2.14461159864296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.258319646955462,0.337912250981556,0.234714477291508,0.2604087696879,0,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,1.12609485270709,2.01466786693992,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0.231768651889711,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr10:5484221..5484225,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2563 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:5484221..5484225,- | |||
|id=chr10:5484221..5484225,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!3.31e-18!26;UBERON:0000990!3.31e-18!26;UBERON:0003133!1.63e-15!24;UBERON:0000474!3.21e-13!9;UBERON:0003134!1.77e-11!8;UBERON:0000991!2.40e-11!18;UBERON:0005564!2.40e-11!18;UBERON:0003100!1.84e-10!11;UBERON:0004176!2.71e-10!17;UBERON:0009196!2.71e-10!17;UBERON:0009117!2.71e-10!17;UBERON:0003101!6.89e-07!16;UBERON:0000079!6.89e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003975,1.80e-39,5;UBERON:0000474,3.75e-39,9;UBERON:0003100,3.07e-32,11;UBERON:0003134,4.22e-25,8;UBERON:0000993,3.06e-23,1;UBERON:0006834,8.39e-23,1;UBERON:0005795,1.08e-22,4;UBERON:0000995,1.08e-22,4;UBERON:0000996,1.39e-22,1;UBERON:0004175,1.96e-22,9;UBERON:0005156,3.27e-14,26;UBERON:0000990,3.27e-14,26;UBERON:0003133,5.26e-09,24;UBERON:0000162,1.88e-08,3;UBERON:0001353,1.88e-08,3;UBERON:0000163,1.88e-08,3;UBERON:0006866,1.88e-08,3;UBERON:0001046,1.88e-08,3;UBERON:0000164,1.88e-08,3;UBERON:0000931,1.88e-08,3;UBERON:0007023,1.20e-07,51 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0.247194967734374,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0.509196819251581,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0,0.316182685621286,0.590440591918409,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.624075346229121,0.505157755894224,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0.35613120733451,0.977321756121456,2.14461159864296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.258319646955462,0.337912250981556,0.234714477291508,0.2604087696879,0,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,1.12609485270709,2.01466786693992,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0.231768651889711,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr10:5484221..5484225,- | |||
}} |
Revision as of 16:53, 12 September 2013
Short description: | p@chr10:5484221..5484225, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:5484221..5484225, - |
Coexpression cluster: | MCL_coexpression_mm9:2563 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
internal female genitalia | 1.80e-39 | 5 |
female reproductive system | 3.75e-39 | 9 |
female organism | 3.07e-32 | 11 |
female reproductive organ | 4.22e-25 | 8 |
oviduct | 3.06e-23 | 1 |
uterus or analog | 8.39e-23 | 1 |
embryonic uterus | 1.08e-22 | 4 |
uterus | 1.08e-22 | 4 |
vagina | 1.39e-22 | 1 |
internal genitalia | 1.96e-22 | 9 |
reproductive structure | 3.27e-14 | 26 |
reproductive system | 3.27e-14 | 26 |
reproductive organ | 5.26e-09 | 24 |
cloaca | 1.88e-08 | 3 |
anal region | 1.88e-08 | 3 |
embryonic cloaca | 1.88e-08 | 3 |
terminal part of digestive tract | 1.88e-08 | 3 |
hindgut | 1.88e-08 | 3 |
primitive urogenital sinus | 1.88e-08 | 3 |
proctodeum | 1.88e-08 | 3 |
adult organism | 1.20e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.