FFCP PHASE1:Hg19::chr14:64663724..64663774,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23224 | |EntrezGene=23224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17084 | |HGNC=17084 | ||
|TSSclassifier=N | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=222bp_to_ENST00000553801_5end | |association_with_transcript=222bp_to_ENST00000553801_5end | ||
Revision as of 18:44, 6 July 2013
| Short description: | p3@SYNE2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_SYNE2_5end |
| Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
| Association with transcript: | 222bp_to_ENST00000553801_5end |
| EntrezGene: | SYNE2 |
| HGNC: | 17084 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@SYNE2 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 5.97e-66 | 56 |
| neural rod | 5.97e-66 | 56 |
| future spinal cord | 5.97e-66 | 56 |
| neural keel | 5.97e-66 | 56 |
| regional part of nervous system | 3.26e-64 | 53 |
| regional part of brain | 3.26e-64 | 53 |
| central nervous system | 5.06e-57 | 81 |
| adult organism | 2.89e-55 | 114 |
| regional part of forebrain | 6.82e-55 | 41 |
| forebrain | 6.82e-55 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
