FFCP PHASE1:Hg19::chr1:116072140..116072172,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=N | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
Revision as of 19:22, 5 July 2013
| Short description: | p@chr1:116072140..116072172, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr1:116072140..116072172, + |
| Coexpression cluster: | C1601_Mallassezderived_Gingival_Keratinocyte_Prostate_Sebocyte_salivary_cervical |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr1:116072140..116072172+ |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell of Malassez | 7.85e-67 | 3 |
| gingival epithelial cell | 1.98e-30 | 3 |
| general ecto-epithelial cell | 1.12e-25 | 14 |
| sebum secreting cell | 2.59e-12 | 2 |
| epithelial cell of sweat gland | 2.59e-12 | 2 |
| epithelial cell of skin gland | 2.59e-12 | 2 |
| acinar cell of sebaceous gland | 2.59e-12 | 2 |
| ecto-epithelial cell | 7.56e-11 | 34 |
| fibrocyte | 1.30e-08 | 3 |
| tendon cell | 1.30e-08 | 3 |
| Ontology term | p-value | n |
|---|---|---|
| jaw skeleton | 2.23e-50 | 4 |
| splanchnocranium | 2.23e-50 | 4 |
| primary subdivision of cranial skeletal system | 1.70e-40 | 5 |
| protuberance | 6.72e-34 | 6 |
| pharyngeal arch | 6.72e-34 | 6 |
| embryonic head | 6.72e-34 | 6 |
| gingival epithelium | 1.98e-30 | 3 |
| cranial skeletal system | 7.22e-19 | 11 |
| axial skeletal system | 5.52e-15 | 14 |
| subdivision of skeletal system | 3.36e-13 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
