FFCP PHASE1:Hg19::chr7:103630073..103630088,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5649 | |EntrezGene=5649 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9957 | |HGNC=9957 | ||
|TSSclassifier=S | |||
|UniProt=P78509,F8WF74 | |UniProt=P78509,F8WF74 | ||
|association_with_transcript=-110bp_to_ENST00000343529,ENST00000424685,ENST00000424828,ENST00000428762,ENST00000448171,NM_005045,NM_173054,uc003vca.2,uc010liz.2_5end | |association_with_transcript=-110bp_to_ENST00000343529,ENST00000424685,ENST00000424828,ENST00000428762,ENST00000448171,NM_005045,NM_173054,uc003vca.2,uc010liz.2_5end | ||
Revision as of 12:33, 10 July 2013
| Short description: | p2@RELN |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_RELN_5end |
| Coexpression cluster: | C2873_cerebellum_pineal_mesothelioma_Endothelial_Lymphatic_merkel_chronic |
| Association with transcript: | -110bp_to_ENST00000343529, ENST00000424685, ENST00000424828, ENST00000428762, ENST00000448171, NM_005045, NM_173054, uc003vca.2, uc010liz.2_5end |
| EntrezGene: | RELN |
| HGNC: | 9957 |
| UniProt: | P78509F8WF74 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p2@RELN |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| ciliated cell | 1.14e-07 | 3 |
| ciliated epithelial cell | 1.14e-07 | 3 |
| multi-ciliated epithelial cell | 1.14e-07 | 3 |
| non-pigmented ciliary epithelial cell | 1.14e-07 | 3 |
| lymphangioblast | 6.21e-07 | 6 |
| endothelial cell of lymphatic vessel | 6.21e-07 | 6 |
| vascular lymphangioblast | 6.21e-07 | 6 |
| Ontology term | p-value | n |
|---|---|---|
| neural plate | 2.79e-17 | 82 |
| presumptive neural plate | 2.79e-17 | 82 |
| neurectoderm | 4.30e-16 | 86 |
| ecto-epithelium | 2.28e-15 | 104 |
| pre-chordal neural plate | 1.16e-12 | 61 |
| brain | 7.20e-12 | 68 |
| future brain | 7.20e-12 | 68 |
| neural tube | 1.09e-11 | 56 |
| neural rod | 1.09e-11 | 56 |
| future spinal cord | 1.09e-11 | 56 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
