FFCP PHASE1:Hg19::chr4:5890145..5890234,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1400 | |EntrezGene=1400 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2365 | |HGNC=2365 | ||
|TSSclassifier=S | |||
|UniProt=Q14194 | |UniProt=Q14194 | ||
|association_with_transcript=0bp_to_ENST00000397890,ENST00000506216,ENST00000534845,uc003gip.2_5end | |association_with_transcript=0bp_to_ENST00000397890,ENST00000506216,ENST00000534845,uc003gip.2_5end | ||
Revision as of 18:33, 9 July 2013
| Short description: | p1@CRMP1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_CRMP1_5end |
| Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
| Association with transcript: | 0bp_to_ENST00000397890, ENST00000506216, ENST00000534845, uc003gip.2_5end |
| EntrezGene: | CRMP1 |
| HGNC: | 2365 |
| UniProt: | Q14194 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@CRMP1 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural cell | 1.99e-11 | 25 |
| neurectodermal cell | 9.93e-11 | 59 |
| neuronal stem cell | 5.76e-09 | 8 |
| migratory neural crest cell | 1.24e-07 | 41 |
| neuron | 5.07e-07 | 6 |
| neuroblast | 5.07e-07 | 6 |
| electrically signaling cell | 5.07e-07 | 6 |
| ectodermal cell | 8.22e-07 | 72 |
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 1.96e-49 | 81 |
| nervous system | 2.43e-49 | 89 |
| neurectoderm | 6.56e-45 | 86 |
| neural tube | 6.47e-44 | 56 |
| neural rod | 6.47e-44 | 56 |
| future spinal cord | 6.47e-44 | 56 |
| neural keel | 6.47e-44 | 56 |
| neural plate | 3.87e-42 | 82 |
| presumptive neural plate | 3.87e-42 | 82 |
| regional part of nervous system | 9.12e-42 | 53 |
| Ontology term | p-value | n |
|---|---|---|
| neuroectodermal tumor | 6.19e-07 | 10 |
| germ cell and embryonal cancer | 7.34e-07 | 22 |
| germ cell cancer | 7.34e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
