FFCP PHASE1:Hg19::chr20:45948030..45948047,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23613 | |EntrezGene=23613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9397 | |HGNC=9397 | ||
|TSSclassifier=W | |||
|UniProt=Q5JV90 | |UniProt=Q5JV90 | ||
|association_with_transcript=-225bp_to_ENST00000468376,uc002xtg.2_5end | |association_with_transcript=-225bp_to_ENST00000468376,uc002xtg.2_5end | ||
Revision as of 06:51, 9 July 2013
| Short description: | p16@ZMYND8 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_16_at_ZMYND8_5end |
| Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
| Association with transcript: | -225bp_to_ENST00000468376, uc002xtg.2_5end |
| EntrezGene: | ZMYND8 |
| HGNC: | 9397 |
| UniProt: | Q5JV90 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p16@ZMYND8 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| germ line cell | 1.41e-22 | 7 |
| germ cell | 1.41e-22 | 7 |
| astrocyte of the cerebral cortex | 1.82e-13 | 3 |
| oligodendrocyte | 1.16e-12 | 7 |
| macroglial cell | 1.16e-12 | 7 |
| astrocyte | 1.16e-12 | 7 |
| oligodendrocyte precursor cell | 1.16e-12 | 7 |
| neural cell | 1.02e-08 | 25 |
| Ontology term | p-value | n |
|---|---|---|
| testis | 8.58e-20 | 8 |
| multi cell component structure | 8.72e-20 | 2 |
| neuron projection bundle | 8.72e-20 | 2 |
| globus pallidus | 1.41e-19 | 2 |
| pallidum | 1.41e-19 | 2 |
| nervous system | 2.65e-15 | 89 |
| central nervous system | 1.57e-14 | 81 |
| male reproductive organ | 1.83e-14 | 11 |
| regional part of forebrain | 2.54e-13 | 41 |
| forebrain | 2.54e-13 | 41 |
| Ontology term | p-value | n |
|---|---|---|
| germ cell and embryonal cancer | 5.05e-11 | 22 |
| germ cell cancer | 5.05e-11 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
