FFCP PHASE1:Hg19::chr19:49838937..49838974,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=W | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
Revision as of 19:55, 8 July 2013
| Short description: | p@chr19:49838937..49838974, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr19:49838937..49838974, + |
| Coexpression cluster: | C590_CD4_CD14CD16_CD14_CD19_Neutrophils_Whole_blood |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr19:49838937..49838974+ |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 1.41e-97 | 136 |
| nongranular leukocyte | 4.19e-88 | 115 |
| hematopoietic stem cell | 2.65e-87 | 168 |
| hematopoietic lineage restricted progenitor cell | 1.08e-83 | 120 |
| hematopoietic oligopotent progenitor cell | 4.32e-83 | 161 |
| hematopoietic multipotent progenitor cell | 4.32e-83 | 161 |
| hematopoietic cell | 4.15e-81 | 177 |
| myeloid leukocyte | 4.56e-54 | 72 |
| granulocyte monocyte progenitor cell | 1.32e-43 | 67 |
| myeloid lineage restricted progenitor cell | 7.64e-43 | 66 |
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 3.70e-55 | 98 |
| blood island | 3.70e-55 | 98 |
| hemolymphoid system | 3.67e-51 | 108 |
| immune system | 8.72e-40 | 93 |
| bone marrow | 7.97e-38 | 76 |
| bone element | 8.88e-34 | 82 |
| skeletal element | 3.06e-29 | 90 |
| skeletal system | 1.27e-24 | 100 |
| connective tissue | 4.23e-21 | 371 |
| lateral plate mesoderm | 6.72e-16 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
