NonredundantMotifs:65: Difference between revisions
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.171801268021359;0.139044669546891;0.265726262551171;0.423427799880579!2;0.146596658867561;0.118316133720996;0.577770295308537;0.157316912102905!3;0.247220107940536;0.191958250197233;0.432934963748745;0.127886678113486!4;0.119276597932449;0.232190913824341;0.39478558232841;0.253746905914801!5;0.227546273197179;0.664337925307098;0.0169910812960097;0.0911247201997123!6;0.27129000948291;0.146818938031769;0.518707235663286;0.0631838168220354!7;0.693351081732599;0.120941898623978;0.0668632665649568;0.118843753078466!8;0.0414592676270053;0.895990133603803;0.0422530582604952;0.0202975405086965!9;0.0202975405086965;0.0422530582604952;0.895990133603803;0.0414592676270053!10;0.118843753078466;0.0668632665649568;0.120941898623978;0.693351081732599!11;0.0631838168220354;0.518707235663286;0.146818938031769;0.27129000948291!12;0.0911247201997123;0.0169910812960098;0.664337925307098;0.22754627319718!13;0.122588689281357;0.186958929807665;0.078274324956417;0.612178055954561!14;0.103039017771895;0.27471909730558;0.113320329609324;0.508921555313201!15;0.375945452081216;0.28903990386458;0.127861454685645;0.207153189368559!16;0.429988760669549;0.189119885668972;0.110126757054164;0.270764596607315 | |||
|entrez_gene_id=10691 | |entrez_gene_id=10691 | ||
|motif_cluster_2013_march_motif_members= | |motif_cluster_2013_march_motif_members= /SWISSREGULON:ATF6.p2~XBP1.p3 /UNIPROBE:Gmeb1_secondary;SCI09 /HOCOMOCO:XBP1_f1~ATF6A_si | ||
|name=known65 | |name=known65 | ||
|representative_motif_db=UNIPROBE | |representative_motif_db=UNIPROBE | ||
Revision as of 10:46, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known65
- db :UNIPROBE
- Id :Gmeb1_secondary
- name :SCI09
- score :0.48838353073623125
- External refs:
- Internal refs:
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Sub Motif Members
