FFCP PHASE1:Hg19::chr1:33832914..33832926,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1912|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=3183|TSSclassifier=S|UniProt=B4DG61|association_with_transcript=94bp_to_AK294426_5end|description=CAGE_peak_12_at_PHC2_5end|id=chr1:33832914..33832926,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002600;3.18e-11;2!CL:0000346;6.56e-08;3!CL:1000428;6.56e-08;3!CL:0000515;6.56e-08;3|ontology_enrichment_celltype_v019_2=CL:0002600,2.23e-11,2;CL:0000346,5.93e-08,3;CL:1000428,5.93e-08,3|ontology_enrichment_development_v019=UBERON:0006241;6.56e-08;3!UBERON:0003057;6.56e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.67e-11!57;UBERON:0005068!1.67e-11!57;UBERON:0006241!1.67e-11!57;UBERON:0007135!1.67e-11!57;UBERON:0001893!4.79e-10!34;UBERON:0001017!5.24e-10!82;UBERON:0002780!7.24e-10!41;UBERON:0001890!7.24e-10!41;UBERON:0006240!7.24e-10!41;UBERON:0002791!1.04e-09!33;UBERON:0005743!1.71e-09!86;UBERON:0003080!1.96e-09!42;UBERON:0002020!2.69e-09!34;UBERON:0003528!2.69e-09!34;UBERON:0001869!3.69e-09!32;UBERON:0003075!1.01e-08!86;UBERON:0007284!1.01e-08!86;UBERON:0000955!1.25e-08!69;UBERON:0006238!1.25e-08!69;UBERON:0002346!1.77e-08!90;UBERON:0000073!1.80e-08!94;UBERON:0001016!1.80e-08!94;UBERON:0002616!2.89e-08!59;UBERON:0007023!1.05e-07!115;UBERON:0001950!1.85e-07!20;UBERON:0002619!3.02e-07!22;UBERON:0003056!9.26e-07!61|ontology_enrichment_uberon_v019=UBERON:0002067;9.23e-10;9!UBERON:0002114;4.68e-08;2!UBERON:0002240;6.56e-08;3!UBERON:0005174;6.56e-08;3!UBERON:0000412;6.56e-08;3!UBERON:0001992;6.56e-08;3!UBERON:0001137;6.56e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0002067,8.84e-10,9;UBERON:0004016,8.84e-10,9;UBERON:0010083,8.84e-10,9;UBERON:0002114,4.84e-08,2;UBERON:0000412,5.93e-08,3;UBERON:0001992,5.93e-08,3;UBERON:0002240,6.34e-08,3;UBERON:0005174,6.34e-08,3;UBERON:0001137,6.34e-08,3|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0.672325146451775,0,0,0.487932798790507,0.369363174230364,0.408001382488506,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0.872389432677388,1.13362783106643,0.485168122375632,0.232429036905685,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0.188242339542605,1.09162460023138,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.392937226493138,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0.234321431833797,0.936480230490962,0,0.747243402759005,1.17434498643765,0.485618833104395,0.140450806702248,0,0.245668634623536,0.309977343527296,0,0,0,0.718618141816238,0.168336113954066,0.625592599359821,0,0.438977620880838,0.30648779579902,0.300476117813194,0,0.179389635688862,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0,0,0.144366447761074,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.448524337381443,0.43596006883328,0.4400297149257,0,0,0,0,0,0.257207374262142,0,0.532844358032199,0,0,0.823240336780769,0.325736184293735,0,0,0,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0.289562613335158,1.02738161275192,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0.343143423810856,0,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0.616838775210622,0,0.164254312027618,0.519254429183621,0.697262270759755,0,0.200506470303285,0,0.114814448164607,0.728364672026868,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.275673144969061,0,0.435050081742686,0,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0,0,0,0,1.9676842561399,0,0.6196469961995,0.563391205064483,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0,0.43050537267123,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0.852408440419239,0,0,0,0,0.703347082052564,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0.173624994933292,0.885741385813839,0.361789315876224,0,0.221158519862449,0.295547618953547,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,1.53036380815245,0.063186579628488,0.150323419414493,0,0,0.661983911750998,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.411125773940253,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0.209205692624666,0.101998217636322,0.288950589901519,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.104909176269996,0.422401346077626,0,0,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.366078794705889,0.500763722825999,0,0.332787154610557,0,2.90532133366085,0,0,0,0.235265819698172,0,0.144921028610825,0.298509605773748,0,0,0.378806010550178,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0.899606224327209,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0.168942440653073,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0.107824811396682,0,0,0,0,0.495743057036009,0,0,0,0.80057074828547,0.352675943690684,0,0.0642292250964595,0,0.478901577171454,0.205116364240755,0.252071696221718,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.135075169236789,0.781078098613847,0,0.126831620387814,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0.131545547125698,0,0.111231401892069,0.078493092850514,0.471346769748006,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0.340853619036631,0,0,0.31020638566432,0,0.111855431797792,0,0,0,0.410651227424988,0,0,0,0,0,0,0.219881033490858,0.150962843566674,0,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,1.2679671827502,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0.203974470572744,2.18175345170189,0,0.371995018166751,0,0,0,0,0,0,0,0,0.250707539292375,0.303114792872958,0.267964130156178,0,0.413731983447581,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0.244482888365733,0.406896178315738,0,0.201273793591026,0|short_description=p12@PHC2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1912 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3183 | |||
|TSSclassifier=S | |||
|UniProt=B4DG61 | |||
|association_with_transcript=94bp_to_AK294426_5end | |||
|description=CAGE_peak_12_at_PHC2_5end | |||
|id=chr1:33832914..33832926,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002600;3.18e-11;2!CL:0000346;6.56e-08;3!CL:1000428;6.56e-08;3!CL:0000515;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,2.23e-11,2;CL:0000346,5.93e-08,3;CL:1000428,5.93e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;6.56e-08;3!UBERON:0003057;6.56e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.67e-11!57;UBERON:0005068!1.67e-11!57;UBERON:0006241!1.67e-11!57;UBERON:0007135!1.67e-11!57;UBERON:0001893!4.79e-10!34;UBERON:0001017!5.24e-10!82;UBERON:0002780!7.24e-10!41;UBERON:0001890!7.24e-10!41;UBERON:0006240!7.24e-10!41;UBERON:0002791!1.04e-09!33;UBERON:0005743!1.71e-09!86;UBERON:0003080!1.96e-09!42;UBERON:0002020!2.69e-09!34;UBERON:0003528!2.69e-09!34;UBERON:0001869!3.69e-09!32;UBERON:0003075!1.01e-08!86;UBERON:0007284!1.01e-08!86;UBERON:0000955!1.25e-08!69;UBERON:0006238!1.25e-08!69;UBERON:0002346!1.77e-08!90;UBERON:0000073!1.80e-08!94;UBERON:0001016!1.80e-08!94;UBERON:0002616!2.89e-08!59;UBERON:0007023!1.05e-07!115;UBERON:0001950!1.85e-07!20;UBERON:0002619!3.02e-07!22;UBERON:0003056!9.26e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;9.23e-10;9!UBERON:0002114;4.68e-08;2!UBERON:0002240;6.56e-08;3!UBERON:0005174;6.56e-08;3!UBERON:0000412;6.56e-08;3!UBERON:0001992;6.56e-08;3!UBERON:0001137;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,8.84e-10,9;UBERON:0004016,8.84e-10,9;UBERON:0010083,8.84e-10,9;UBERON:0002114,4.84e-08,2;UBERON:0000412,5.93e-08,3;UBERON:0001992,5.93e-08,3;UBERON:0002240,6.34e-08,3;UBERON:0005174,6.34e-08,3;UBERON:0001137,6.34e-08,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0.672325146451775,0,0,0.487932798790507,0.369363174230364,0.408001382488506,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0.872389432677388,1.13362783106643,0.485168122375632,0.232429036905685,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0.188242339542605,1.09162460023138,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.392937226493138,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0.234321431833797,0.936480230490962,0,0.747243402759005,1.17434498643765,0.485618833104395,0.140450806702248,0,0.245668634623536,0.309977343527296,0,0,0,0.718618141816238,0.168336113954066,0.625592599359821,0,0.438977620880838,0.30648779579902,0.300476117813194,0,0.179389635688862,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0,0,0.144366447761074,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.448524337381443,0.43596006883328,0.4400297149257,0,0,0,0,0,0.257207374262142,0,0.532844358032199,0,0,0.823240336780769,0.325736184293735,0,0,0,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0.289562613335158,1.02738161275192,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0.343143423810856,0,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0.616838775210622,0,0.164254312027618,0.519254429183621,0.697262270759755,0,0.200506470303285,0,0.114814448164607,0.728364672026868,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.275673144969061,0,0.435050081742686,0,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0,0,0,0,1.9676842561399,0,0.6196469961995,0.563391205064483,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0,0.43050537267123,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0.852408440419239,0,0,0,0,0.703347082052564,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0.173624994933292,0.885741385813839,0.361789315876224,0,0.221158519862449,0.295547618953547,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,1.53036380815245,0.063186579628488,0.150323419414493,0,0,0.661983911750998,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.411125773940253,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0.209205692624666,0.101998217636322,0.288950589901519,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.104909176269996,0.422401346077626,0,0,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.366078794705889,0.500763722825999,0,0.332787154610557,0,2.90532133366085,0,0,0,0.235265819698172,0,0.144921028610825,0.298509605773748,0,0,0.378806010550178,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0.899606224327209,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0.168942440653073,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0.107824811396682,0,0,0,0,0.495743057036009,0,0,0,0.80057074828547,0.352675943690684,0,0.0642292250964595,0,0.478901577171454,0.205116364240755,0.252071696221718,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.135075169236789,0.781078098613847,0,0.126831620387814,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0.131545547125698,0,0.111231401892069,0.078493092850514,0.471346769748006,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0.340853619036631,0,0,0.31020638566432,0,0.111855431797792,0,0,0,0.410651227424988,0,0,0,0,0,0,0.219881033490858,0.150962843566674,0,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,1.2679671827502,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0.203974470572744,2.18175345170189,0,0.371995018166751,0,0,0,0,0,0,0,0,0.250707539292375,0.303114792872958,0.267964130156178,0,0.413731983447581,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0.244482888365733,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p12@PHC2 | |||
}} |
Revision as of 05:23, 12 September 2013
Short description: | p12@PHC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_PHC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 94bp_to_AK294426_5end |
EntrezGene: | PHC2 |
HGNC: | 3183 |
UniProt: | B4DG61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 2.23e-11 | 2 |
hair follicle dermal papilla cell | 5.93e-08 | 3 |
stem cell of epidermis | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
dermis | 8.84e-10 | 9 |
dermatome | 8.84e-10 | 9 |
future dermis | 8.84e-10 | 9 |
duodenum | 4.84e-08 | 2 |
dermal papilla | 5.93e-08 | 3 |
papillary layer of dermis | 5.93e-08 | 3 |
spinal cord | 6.34e-08 | 3 |
dorsal region element | 6.34e-08 | 3 |
dorsum | 6.34e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.