FFCP PHASE1:Hg19::chr1:78401567..78401585,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C933|description=CAGE_peak_at_chr1:78401567..78401585,+|id=chr1:78401567..78401585,+|ontology_enrichment_celltype=CL:0000057!7.06e-09!75;CL:0000055!5.54e-08!180|ontology_enrichment_celltype_v019=CL:0002617;6.19e-09;2|ontology_enrichment_celltype_v019_2=CL:0002617,9.57e-09,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!2.34e-07!95;UBERON:0002385!2.39e-07!63;UBERON:0001015!2.39e-07!63;UBERON:0000383!2.39e-07!63|ontology_enrichment_uberon_v019=UBERON:0005904;5.96e-09;4!UBERON:0003101;1.68e-07;22!UBERON:0000079;1.68e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0005904,3.67e-09,4;UBERON:0003101,1.20e-07,22;UBERON:0000079,1.20e-07,22;UBERON:0000948,3.11e-07,24;UBERON:0005498,3.11e-07,24;UBERON:0004140,3.11e-07,24;UBERON:0009881,3.11e-07,24;UBERON:0004141,3.11e-07,24;UBERON:0003084,3.11e-07,24;UBERON:0007005,3.11e-07,24;UBERON:0004139,3.11e-07,24;UBERON:0004291,3.11e-07,24|phase1_expression=1.09007027562334,4.49611100171065,2.11431606143957,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.522371256399677,0,0,0,0,0.247532705920093,0.662794751455832,0,2.41077811209591,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0.426224750532694,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.217188844705117,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0.255725123687061,0.361439152384566,0,0.434539556882471,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.926864265692532,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0.404132016209064,0,0,0.576175924479999,0,0.312160076830321,0,0.448346041655403,0,0,0,0.408308342509787,0.491337269247072,0.206651562351531,0,1.23633464639278,0,0,0.505008341862199,0.250237039743928,0,0,0.30648779579902,0,0.453728732640084,1.61450672119976,0.427114777637135,0.211931901159562,0.900273288253207,0.206105058476878,0.515281080091258,0.744467425326359,0.675105328965065,0.0974370051611986,2.52433774244115,0.368199594569197,0,2.13005755509969,0.10075209822764,0.508681776931463,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,2.3218396401599,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0,1.06375246633948,1.04007436911366,0,0,0,1.57275793023962,0,0,0.325736184293735,0,0,0,0,1.49959486773086,0,0,0,0.239624855491583,1.14861935834114,0,0.868687840005475,0,0.179060963239896,0.448340575974109,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,1.03985430765404,2.3195768543631,1.73472656537328,0.468565659970853,0,0,0,0,0,0.260650843404249,0,0,0,0.215714200818617,0,0,0,0,0.496215615637554,1.68808170616869,1.12264037773229,0.512556597022804,0,1.28683136914886,0,0.925258162815933,0.355123450626254,0.328508624055237,0,0.348631135379878,0,0.40101294060657,0,0,1.45672934405374,1.83574180943194,0,0.15403067420883,0,0,0.316654886678627,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.366277859273374,0,0,0,1.6068392984416,0.193341436584244,0,0.15350367472613,0.137836572484531,0.214840489736547,0.870100163485371,0.340906509664404,1.06838442776085,0,0,0,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0.38126038784765,0,2.56763392820352,0,0,0.179872457583315,0.54907405947211,0.353437207037059,0,1.58510321173008,0,0,0,0,0.272999822815972,1.1312434556297,1.13008116620243,0,0,0.438450885253763,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0.573645408816206,0.294747123039363,0,0,0.422215270595328,0.987884678879706,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0.561594356226918,1.14117339516596,0,0,0,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0.398495976502139,0.552567831062295,0,0,0,0.933118762985422,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,1.18375320854817,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.225980740780532,0.137041924646751,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0.429765441419957,0,1.39641200636127,3.43740636017525,0,0.399358000997982,0.429226048136571,0.89268582976749,0.873385142327441,1.80149941771202,0,0,0,0,0,0.677386656526276,0,0,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0,0,0,0.191915197319445,5.00286728461357,7.28301167401975,0,0,0.864221491201268,0,0,0,0.511164065356265,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0.149254802886874,0,0,0.378806010550178,0,1.77962244319307,0,0.151230923763239,0.15543720058278,0.443565449968902,0.159296767163702,0,0,0.414706207840855,0.797525143673985,1.5652351854352,0.150257608997218,0,0,0.363697318405119,0.322231671127465,0,1.19428766609585,2.40016658797892,0,1.01024846629776,0,0,0,0.260994291965212,0.226705925512272,0.463044948647668,0.734210113519403,0.71635536432595,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0.636008701306837,0,0,0.705351887381368,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0.198916222116275,0.225630985047772,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,3.47347824872506,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0.801711364730253,0.207216164163037,0.85359238546975,0,0,0.118332000730565,0,1.69354820076372,0,0,0,0,0,0,20.0702939528247,1.43727929598746,2.3196288626764,0.485710993059139,0,0,0.118920090777569,0,0,0,0.0771741581079447,0.218559560503957,0,2.94177986104687,0,0,0,0,0.679708458751268,0.187967835959707,0.0644578879735772,0,0,0,0,1.46067277649303,0.458729283404541,0.143339583151451,0.315543124386369,0.0679914901909147,0,0.5290268405154,1.11598505450025,0.462175628631418,0,0,0,0,0,0,0.275684698604535,0,0.151557396436479,0.267964130156178,0.829169439458779,0,0.852935927603924,0.714193294391221,0,0,0.560659312903067,0.0636471582781649,0.404234377916439,4.35433495793923,3.42233301085281,0,0.0717222053926763,0,0,0.320182037633146,0,0,0,0.122241444182866,0.813792356631477,0,0.201273793591026,0.320568492303233|short_description=p@chr1:78401567..78401585,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C933 | |||
|description=CAGE_peak_at_chr1:78401567..78401585,+ | |||
|id=chr1:78401567..78401585,+ | |||
|ontology_enrichment_celltype=CL:0000057!7.06e-09!75;CL:0000055!5.54e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0002617;6.19e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,9.57e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.34e-07!95;UBERON:0002385!2.39e-07!63;UBERON:0001015!2.39e-07!63;UBERON:0000383!2.39e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;5.96e-09;4!UBERON:0003101;1.68e-07;22!UBERON:0000079;1.68e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,3.67e-09,4;UBERON:0003101,1.20e-07,22;UBERON:0000079,1.20e-07,22;UBERON:0000948,3.11e-07,24;UBERON:0005498,3.11e-07,24;UBERON:0004140,3.11e-07,24;UBERON:0009881,3.11e-07,24;UBERON:0004141,3.11e-07,24;UBERON:0003084,3.11e-07,24;UBERON:0007005,3.11e-07,24;UBERON:0004139,3.11e-07,24;UBERON:0004291,3.11e-07,24 | |||
|phase1_expression=1.09007027562334,4.49611100171065,2.11431606143957,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.522371256399677,0,0,0,0,0.247532705920093,0.662794751455832,0,2.41077811209591,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0.426224750532694,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.217188844705117,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0.255725123687061,0.361439152384566,0,0.434539556882471,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.926864265692532,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0.404132016209064,0,0,0.576175924479999,0,0.312160076830321,0,0.448346041655403,0,0,0,0.408308342509787,0.491337269247072,0.206651562351531,0,1.23633464639278,0,0,0.505008341862199,0.250237039743928,0,0,0.30648779579902,0,0.453728732640084,1.61450672119976,0.427114777637135,0.211931901159562,0.900273288253207,0.206105058476878,0.515281080091258,0.744467425326359,0.675105328965065,0.0974370051611986,2.52433774244115,0.368199594569197,0,2.13005755509969,0.10075209822764,0.508681776931463,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,2.3218396401599,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0,1.06375246633948,1.04007436911366,0,0,0,1.57275793023962,0,0,0.325736184293735,0,0,0,0,1.49959486773086,0,0,0,0.239624855491583,1.14861935834114,0,0.868687840005475,0,0.179060963239896,0.448340575974109,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,1.03985430765404,2.3195768543631,1.73472656537328,0.468565659970853,0,0,0,0,0,0.260650843404249,0,0,0,0.215714200818617,0,0,0,0,0.496215615637554,1.68808170616869,1.12264037773229,0.512556597022804,0,1.28683136914886,0,0.925258162815933,0.355123450626254,0.328508624055237,0,0.348631135379878,0,0.40101294060657,0,0,1.45672934405374,1.83574180943194,0,0.15403067420883,0,0,0.316654886678627,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.366277859273374,0,0,0,1.6068392984416,0.193341436584244,0,0.15350367472613,0.137836572484531,0.214840489736547,0.870100163485371,0.340906509664404,1.06838442776085,0,0,0,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0.38126038784765,0,2.56763392820352,0,0,0.179872457583315,0.54907405947211,0.353437207037059,0,1.58510321173008,0,0,0,0,0.272999822815972,1.1312434556297,1.13008116620243,0,0,0.438450885253763,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0.573645408816206,0.294747123039363,0,0,0.422215270595328,0.987884678879706,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0.561594356226918,1.14117339516596,0,0,0,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0.398495976502139,0.552567831062295,0,0,0,0.933118762985422,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,1.18375320854817,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.225980740780532,0.137041924646751,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0.429765441419957,0,1.39641200636127,3.43740636017525,0,0.399358000997982,0.429226048136571,0.89268582976749,0.873385142327441,1.80149941771202,0,0,0,0,0,0.677386656526276,0,0,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0,0,0,0.191915197319445,5.00286728461357,7.28301167401975,0,0,0.864221491201268,0,0,0,0.511164065356265,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0.149254802886874,0,0,0.378806010550178,0,1.77962244319307,0,0.151230923763239,0.15543720058278,0.443565449968902,0.159296767163702,0,0,0.414706207840855,0.797525143673985,1.5652351854352,0.150257608997218,0,0,0.363697318405119,0.322231671127465,0,1.19428766609585,2.40016658797892,0,1.01024846629776,0,0,0,0.260994291965212,0.226705925512272,0.463044948647668,0.734210113519403,0.71635536432595,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0.636008701306837,0,0,0.705351887381368,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0.198916222116275,0.225630985047772,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,3.47347824872506,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0.801711364730253,0.207216164163037,0.85359238546975,0,0,0.118332000730565,0,1.69354820076372,0,0,0,0,0,0,20.0702939528247,1.43727929598746,2.3196288626764,0.485710993059139,0,0,0.118920090777569,0,0,0,0.0771741581079447,0.218559560503957,0,2.94177986104687,0,0,0,0,0.679708458751268,0.187967835959707,0.0644578879735772,0,0,0,0,1.46067277649303,0.458729283404541,0.143339583151451,0.315543124386369,0.0679914901909147,0,0.5290268405154,1.11598505450025,0.462175628631418,0,0,0,0,0,0,0.275684698604535,0,0.151557396436479,0.267964130156178,0.829169439458779,0,0.852935927603924,0.714193294391221,0,0,0.560659312903067,0.0636471582781649,0.404234377916439,4.35433495793923,3.42233301085281,0,0.0717222053926763,0,0,0.320182037633146,0,0,0,0.122241444182866,0.813792356631477,0,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr1:78401567..78401585,+ | |||
}} |
Revision as of 06:47, 12 September 2013
Short description: | p@chr1:78401567..78401585, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:78401567..78401585, + |
Coexpression cluster: | C933_skeletal_heart_left_penis_Cardiac_Preadipocyte_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 9.57e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 3.67e-09 | 4 |
male organism | 1.20e-07 | 22 |
male reproductive system | 1.20e-07 | 22 |
heart | 3.11e-07 | 24 |
primitive heart tube | 3.11e-07 | 24 |
primary heart field | 3.11e-07 | 24 |
anterior lateral plate mesoderm | 3.11e-07 | 24 |
heart tube | 3.11e-07 | 24 |
heart primordium | 3.11e-07 | 24 |
cardiac mesoderm | 3.11e-07 | 24 |
cardiogenic plate | 3.11e-07 | 24 |
heart rudiment | 3.11e-07 | 24 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.