FFCP PHASE1:Hg19::chr1:98519916..98519967,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:98519916..98519967,+|id=chr1:98519916..98519967,+|ontology_enrichment_celltype=CL:0000055!6.55e-12!180;CL:0000243!5.37e-08!15;CL:0000125!5.37e-08!15;CL:0000030!5.37e-08!15;CL:0000339!5.37e-08!15;CL:0000222!1.82e-07!119;CL:0002319!5.38e-07!25|ontology_enrichment_celltype_v019=CL:0000243;1.51e-09;15!CL:0000125;1.51e-09;15!CL:0000095;2.75e-08;17!CL:0002319;1.82e-07;25!CL:0000128;6.12e-07;7!CL:0000126;6.12e-07;7!CL:0000127;6.12e-07;7!CL:0002618;6.32e-07;3!CL:0002605;7.51e-07;3|ontology_enrichment_celltype_v019_2=CL:0000243,1.44e-09,15;CL:0000125,1.44e-09,15;CL:0000030,1.44e-09,15;CL:0000339,1.44e-09,15;CL:0000095,2.63e-08,17;CL:0000123,2.63e-08,17;CL:0002319,1.76e-07,25;CL:0000128,5.09e-07,7;CL:0000126,5.09e-07,7;CL:0000127,5.09e-07,7;CL:0002453,5.09e-07,7;CL:0002618,6.65e-07,3;CL:0002605,7.18e-07,3|ontology_enrichment_development_v019=CL:0000339;1.51e-09;15|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000483!3.50e-16!309;UBERON:0000119!1.34e-15!312;UBERON:0000073!1.78e-15!94;UBERON:0001016!1.78e-15!94;UBERON:0000475!7.04e-15!365;UBERON:0005743!3.61e-14!86;UBERON:0001017!9.69e-13!82;UBERON:0000033!5.21e-12!123;UBERON:0003075!7.13e-12!86;UBERON:0007284!7.13e-12!86;UBERON:0000955!1.31e-10!69;UBERON:0006238!1.31e-10!69;UBERON:0002346!1.38e-10!90;UBERON:0000153!1.78e-10!129;UBERON:0007811!1.78e-10!129;UBERON:0004121!2.81e-10!169;UBERON:0000477!3.50e-10!286;UBERON:0000025!5.08e-10!194;UBERON:0000924!1.70e-09!173;UBERON:0006601!1.70e-09!173;UBERON:0001049!3.15e-09!57;UBERON:0005068!3.15e-09!57;UBERON:0006241!3.15e-09!57;UBERON:0007135!3.15e-09!57;UBERON:0002616!6.73e-09!59;UBERON:0003056!6.80e-09!61;UBERON:0004111!1.30e-08!241;UBERON:0000481!1.84e-08!347;UBERON:0000467!7.27e-08!625;UBERON:0000468!8.20e-08!659;UBERON:0000480!9.31e-08!626;UBERON:0002049!8.19e-07!79;UBERON:0007798!8.19e-07!79|ontology_enrichment_uberon_v019=UBERON:0002066;2.28e-09;5!UBERON:0010260;6.35e-09;9!UBERON:0001638;9.10e-07;9!UBERON:0003920;9.10e-07;9!UBERON:0004582;9.10e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002066,3.54e-09,5;UBERON:0010260,8.04e-09,9;UBERON:0001016,1.00e-08,89;UBERON:0000483,5.25e-08,306;UBERON:0000119,8.79e-08,309;UBERON:0001017,7.66e-07,81|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0.37129905888014,0,0,0,0,0,1.47745269692145,0.408001382488506,0.313454721478088,9.73202356245593,3.83248390204076,5.64941878176613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,4.82127567536746,2.4390233720882,3.51339142772504,0.327447688744282,0,0,0,0,0,0,0,0,0.993812036833525,1.72046919021225,0.347140501607594,0.56530794192401,0.419499436209906,0.550236083880135,0.417989933073621,1.55050055501597,2.49036383880697,2.67776490211736,0,0,0,1.47065232138347,0.81014194788176,6.07238152331742,8.30758678716828,4.39184773884957,0,0,1.28241220751285,0,0,0,0.496971951695318,0.25326102332916,0.926864265692532,0.860509862246441,0,0,0,0.74000264525148,0.622422070799533,1.0776853765575,1.47115712802113,0.302714855289863,0,0,0,0,0,0.469737994575059,0.323745888736263,0.280901613404497,0,0.368502951935304,0,0,0.247266929278557,0,1.43723628363248,0.168336113954066,0.375355559615893,0,0.438977620880838,0.30648779579902,0.600952235626387,0.226864366320042,1.07633781413317,0.640672166455702,0,0.600182192168805,0.515262646192195,0.257640540045629,0,0.675105328965065,0.584622030967192,1.26216887122057,0.184099797284599,0.80823028409406,0.710019185033229,1.61203357164224,0,0,0,0,0,0,0,0,0.252320850875628,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,4.28942498407784,1.17408694235822,0,0,0.380508304469197,0,0,0,0,0,0,0.335964256397719,0.992425680696705,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0.771622122786426,0,1.0656887160644,0,1.62786481617433,0.823240336780769,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,2.85273810081437,0.144781306667579,0.205476322550383,0.537182889719687,0,0,0,0,2.7950408664471,0,0,0,1.27587750330633,0,0,0,0,4.50153468953709,1.08506009479894,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0.737476674166813,0.781952530212746,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.561320188866147,0.128139149255701,0,0.160853921143607,0,0.462629081407967,0,0.657017248110473,1.03850885836724,0.232420756919918,0,0,0,0.114814448164607,0.182091168006717,0,0.451199612907412,0.231046011313244,0,0,0.422206515571503,0,1.02056223165909,1.07957958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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:98519916..98519967,+ | |||
|id=chr1:98519916..98519967,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.55e-12!180;CL:0000243!5.37e-08!15;CL:0000125!5.37e-08!15;CL:0000030!5.37e-08!15;CL:0000339!5.37e-08!15;CL:0000222!1.82e-07!119;CL:0002319!5.38e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000243;1.51e-09;15!CL:0000125;1.51e-09;15!CL:0000095;2.75e-08;17!CL:0002319;1.82e-07;25!CL:0000128;6.12e-07;7!CL:0000126;6.12e-07;7!CL:0000127;6.12e-07;7!CL:0002618;6.32e-07;3!CL:0002605;7.51e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.44e-09,15;CL:0000125,1.44e-09,15;CL:0000030,1.44e-09,15;CL:0000339,1.44e-09,15;CL:0000095,2.63e-08,17;CL:0000123,2.63e-08,17;CL:0002319,1.76e-07,25;CL:0000128,5.09e-07,7;CL:0000126,5.09e-07,7;CL:0000127,5.09e-07,7;CL:0002453,5.09e-07,7;CL:0002618,6.65e-07,3;CL:0002605,7.18e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000339;1.51e-09;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!3.50e-16!309;UBERON:0000119!1.34e-15!312;UBERON:0000073!1.78e-15!94;UBERON:0001016!1.78e-15!94;UBERON:0000475!7.04e-15!365;UBERON:0005743!3.61e-14!86;UBERON:0001017!9.69e-13!82;UBERON:0000033!5.21e-12!123;UBERON:0003075!7.13e-12!86;UBERON:0007284!7.13e-12!86;UBERON:0000955!1.31e-10!69;UBERON:0006238!1.31e-10!69;UBERON:0002346!1.38e-10!90;UBERON:0000153!1.78e-10!129;UBERON:0007811!1.78e-10!129;UBERON:0004121!2.81e-10!169;UBERON:0000477!3.50e-10!286;UBERON:0000025!5.08e-10!194;UBERON:0000924!1.70e-09!173;UBERON:0006601!1.70e-09!173;UBERON:0001049!3.15e-09!57;UBERON:0005068!3.15e-09!57;UBERON:0006241!3.15e-09!57;UBERON:0007135!3.15e-09!57;UBERON:0002616!6.73e-09!59;UBERON:0003056!6.80e-09!61;UBERON:0004111!1.30e-08!241;UBERON:0000481!1.84e-08!347;UBERON:0000467!7.27e-08!625;UBERON:0000468!8.20e-08!659;UBERON:0000480!9.31e-08!626;UBERON:0002049!8.19e-07!79;UBERON:0007798!8.19e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0002066;2.28e-09;5!UBERON:0010260;6.35e-09;9!UBERON:0001638;9.10e-07;9!UBERON:0003920;9.10e-07;9!UBERON:0004582;9.10e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002066,3.54e-09,5;UBERON:0010260,8.04e-09,9;UBERON:0001016,1.00e-08,89;UBERON:0000483,5.25e-08,306;UBERON:0000119,8.79e-08,309;UBERON:0001017,7.66e-07,81 | |||
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| |||
|short_description=p@chr1:98519916..98519967,+ | |||
}} |
Revision as of 07:24, 12 September 2013
Short description: | p@chr1:98519916..98519967, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:98519916..98519967, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.44e-09 | 15 |
glial cell | 1.44e-09 | 15 |
glioblast | 1.44e-09 | 15 |
glioblast (sensu Vertebrata) | 1.44e-09 | 15 |
neuron associated cell | 2.63e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 2.63e-08 | 17 |
neural cell | 1.76e-07 | 25 |
oligodendrocyte | 5.09e-07 | 7 |
macroglial cell | 5.09e-07 | 7 |
astrocyte | 5.09e-07 | 7 |
oligodendrocyte precursor cell | 5.09e-07 | 7 |
endothelial cell of umbilical vein | 6.65e-07 | 3 |
astrocyte of the cerebral cortex | 7.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical vein | 3.54e-09 | 5 |
umbilical blood vessel | 8.04e-09 | 9 |
nervous system | 1.00e-08 | 89 |
epithelium | 5.25e-08 | 306 |
cell layer | 8.79e-08 | 309 |
central nervous system | 7.66e-07 | 81 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.