FFCP PHASE1:Hg19::chr1:165796811..165796860,+: Difference between revisions
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{{FFCP | 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052,16.50072494953,13.8803388051516,63.9497836952247,27.8774068787403,61.5946529037899,56.6764813780681,36.1175059945181,38.6683993120219,34.7432351698086,66.392311139609,43.1989577670053,33.9243160216092,59.8033518639836,28.3823300297162,47.917163975946,91.1936102170364,38.8940743907049,10.784158019835,4.09206648562716,3.32162100783408,6.05191958746624,32.7609848846413,45.9595339369455,36.3456852176839,21.7986261481874,28.4866918283356,18.7714327830289,74.3445899172555,30.9297996423092,33.1514433295083,37.3246356019784,43.6119806145452,109.981307624615,9.59322245320968,50.4548528447104,39.2082144193798,12.5419202859993,4.83349480610109,10.6142534414916,36.8885046757966,21.0560859153346,102.47305578054,14.459713691318,65.842777630938,11.8181774177486,9.91876034279095,14.5266811742008,10.87116730476,24.1988828372849,12.4483054435592,9.20411180101551,25.6984956466478,26.696179432279,59.2208011205657,23.1120034137316,48.7518311154427,23.6456899189644,40.0408757114858,35.8049199809294,10.7550769539438,23.5994930383118,18.7563362695942,14.4048681964782,18.1786828436207,19.8127155530841,12.4269155697846,11.7161714792077,10.3343398250592,14.268557293629,22.9729419787652,14.8029597051439,8.9318012110073,27.2600428757412,21.7196126987312,27.8564954656709,10.7610791110024,7.89055285507621,8.42350107999801,6.83008250252319,23.7382014364905,17.8347529814915,15.7010083176481,13.2861002596955,45.2682410585598,34.0368089789732,12.1664293918297,6.59885477647208,28.3074884946927,15.5236982486614,27.8546592672022,25.7985911459007,9.22047419878867,85.6433775591378,32.1988748269707,49.7234658785377,11.2239591062235,32.3257216094337,23.729868316059,25.5766074871214,17.2090943528111,31.7129761957915,37.9199651178252,13.1249985559188,31.1585341219908,16.7511448258733,40.1326354370522,21.4762429051761,21.7893518625839,42.1836020438652,18.7754362784489,27.8216206580429,8.11870101936739,7.28566489588709,33.4533432750811,39.989105807435,24.9732190632894,203.754731998284,130.279512343334,33.0608627411015,30.2522699783143,9.17950154116621,23.9861821144377,13.7283060182187,53.9699292862723,16.0972943034255,10.6936704117751,21.13278637917,36.7042567725684,9.58635963394507,11.6024198352439,29.0828763741543,31.4254931945957,34.9365922998535,11.3140327031727,15.3370641531769,13.7618785021362,19.064164559143,26.8211655728414,12.1704767441737,15.2722741619132,11.6385904913388,22.3197010900051,21.2600789170452,27.2554734137987,33.6864354309661,35.0742486003463,46.3716513701859,30.3926712631106,22.4462620423071,16.5410819162721,16.7974051325891,6.97164023607803,10.1826369459348,24.0459137443046,14.3771864248034,11.9411029864549,7.37999737537595,6.3943020737646,5.83502314381064,35.4336685754738,8.71966068410859,6.06351566874658,15.2401723527873,9.58253243038787,12.4601298076987,19.508439866808,11.3104521225645,22.223092330796,52.9367635553469,5.7921684686082,22.6359509308599,16.4248659682418,11.3684543090066,12.6137815277879,14.6466490320813,11.0700586475064,26.9277533534716|short_description=p1@UCK2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7371 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12562 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_uc001gdp.2,uc010plb.1_5end | |||
|coexpression_cluster_id=C2540 | |||
|description=CAGE_peak_1_at_UCK2_5end | |||
|id=chr1:165796811..165796860,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.80e-35!254;CL:0000548!6.16e-23!679;CL:0000004!6.16e-23!679;CL:0000255!6.16e-23!679;CL:0002321!1.49e-22!248;CL:0000012!4.28e-22!682;CL:0000220!4.89e-22!246;CL:0000055!6.48e-13!180;CL:0000076!1.42e-11!62;CL:0000222!6.37e-10!119;CL:0000003!7.23e-10!722;CL:0000063!2.03e-09!578;CL:0000144!1.50e-08!625;CL:0000057!3.24e-07!75;CL:1000449!9.14e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000449;7.72e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.22e-35,253;CL:0002321,8.86e-23,250;CL:0000076,3.98e-11,63;CL:0000222,4.44e-10,121;CL:0000057,1.71e-07,76;CL:1000449,7.49e-07,15;CL:0000223,9.61e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.60e-27!235;DOID:14566!1.63e-26!239;DOID:0050687!1.14e-19!143;DOID:305!1.02e-16!106;DOID:0050686!1.89e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.59e-27,235;DOID:14566,1.63e-26,239;DOID:0050687,1.14e-19,143;DOID:305,1.02e-16,106;DOID:0050686,1.89e-08,137 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000072;9.17e-09;37!UBERON:0006554;5.91e-08;30!UBERON:0001008;5.91e-08;30!UBERON:0001737;2.06e-07;9!UBERON:0001557;2.06e-07;9!UBERON:0006555;7.72e-07;15!UBERON:0004819;7.72e-07;15!UBERON:0001285;7.72e-07;15!UBERON:0007684;7.72e-07;15!UBERON:0005911;8.95e-07;36 | |||
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| |||
|short_description=p1@UCK2 | |||
}} |
Revision as of 01:32, 12 September 2013
Short description: | p1@UCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_UCK2_5end |
Coexpression cluster: | C2540_small_neuroblastoma_nonsmall_Urothelial_colon_anaplastic_Smooth |
Association with transcript: | -29bp_to_uc001gdp.2, uc010plb.1_5end |
EntrezGene: | UCK2 |
HGNC: | 12562 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.22e-35 | 253 |
embryonic cell | 8.86e-23 | 250 |
squamous epithelial cell | 3.98e-11 | 63 |
mesodermal cell | 4.44e-10 | 121 |
fibroblast | 1.71e-07 | 76 |
epithelial cell of nephron | 7.49e-07 | 15 |
endodermal cell | 9.61e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.94e-11 | 199 |
mesenchyme | 3.95e-10 | 160 |
entire embryonic mesenchyme | 3.95e-10 | 160 |
cell layer | 5.02e-10 | 309 |
epithelium | 1.58e-09 | 306 |
unilaminar epithelium | 3.33e-09 | 148 |
trunk region element | 4.62e-09 | 101 |
epithelial tube | 6.00e-09 | 117 |
trunk mesenchyme | 2.13e-08 | 122 |
endoderm-derived structure | 6.68e-08 | 160 |
endoderm | 6.68e-08 | 160 |
presumptive endoderm | 6.68e-08 | 160 |
respiratory primordium | 1.51e-07 | 38 |
endoderm of foregut | 1.51e-07 | 38 |
larynx | 2.09e-07 | 9 |
epithelial vesicle | 4.15e-07 | 78 |
segment of respiratory tract | 5.72e-07 | 47 |
nephron epithelium | 7.49e-07 | 15 |
renal tubule | 7.49e-07 | 15 |
nephron tubule | 7.49e-07 | 15 |
nephron | 7.49e-07 | 15 |
uriniferous tubule | 7.49e-07 | 15 |
nephrogenic mesenchyme | 7.49e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.59e-27 | 235 |
disease of cellular proliferation | 1.63e-26 | 239 |
cell type cancer | 1.14e-19 | 143 |
carcinoma | 1.02e-16 | 106 |
organ system cancer | 1.89e-08 | 137 |
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