FFCP PHASE1:Hg19::chr10:9102477..9102481,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C108|description=CAGE_peak_at_chr10:9102477..9102481,-|id=chr10:9102477..9102481,-|ontology_enrichment_celltype=CL:1001319!4.75e-10!1;CL:1000600!4.75e-10!1;CL:0002251!3.92e-07!21;CL:0000223!7.50e-07!59|ontology_enrichment_celltype_v019=CL:0000322;1.71e-14;3!CL:0002327;2.53e-11;4|ontology_enrichment_celltype_v019_2=CL:0000322,1.40e-14,3;CL:0002327,2.53e-11,4|ontology_enrichment_development_v019=UBERON:0008425;6.62e-41;1|ontology_enrichment_disease=DOID:305!2.30e-19!106;DOID:1749!4.32e-16!14;DOID:0050687!1.14e-13!143;DOID:5093!1.99e-10!4;DOID:1612!1.99e-10!4;DOID:3905!6.88e-10!9;DOID:3908!1.97e-08!5;DOID:7!4.82e-08!39;DOID:162!3.26e-07!235;DOID:14566!5.24e-07!239|ontology_enrichment_disease_v019=DOID:5093;2.01e-40;4!DOID:1612;2.01e-40;4!DOID:3910;5.15e-21;2!DOID:3908;3.10e-09;5!DOID:305;4.52e-08;106!DOID:7;1.05e-07;39!DOID:1325;5.86e-07;7!DOID:3904;5.86e-07;7|ontology_enrichment_disease_v019_2=DOID:5093,2.22e-40,4;DOID:1612,2.22e-40,4;DOID:3910,3.81e-21,2;DOID:305,5.66e-10,106;DOID:7,5.72e-10,39;DOID:3908,2.74e-09,5;DOID:0050687,1.55e-07,143;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7|ontology_enrichment_uberon=UBERON:0001282!3.61e-10!1;UBERON:0009842!3.61e-10!1;UBERON:0003704!3.61e-10!1;UBERON:0001171!3.61e-10!1;UBERON:0001172!3.61e-10!1;UBERON:0000997!3.96e-10!1;UBERON:0005056!3.96e-10!1;UBERON:0004645!4.75e-10!1;UBERON:0001256!4.75e-10!1;UBERON:0001259!4.75e-10!1;UBERON:0003343!5.97e-10!4;UBERON:0004785!5.97e-10!4;UBERON:0003729!3.92e-08!5;UBERON:0000344!3.14e-07!12|ontology_enrichment_uberon_v019=UBERON:0006562;5.15e-21;2!UBERON:0004903;5.15e-21;2!UBERON:0002173;5.15e-21;2!UBERON:0002186;5.15e-21;2!UBERON:0000310;6.65e-17;10!UBERON:0001443;1.81e-15;11!UBERON:0004821;1.71e-14;3!UBERON:0007499;1.71e-14;3!UBERON:0003215;1.71e-14;3!UBERON:0010368;1.71e-14;3!UBERON:0009911;1.71e-14;3!UBERON:0002299;1.71e-14;3!UBERON:0006524;1.71e-14;3!UBERON:0008874;1.71e-14;3!UBERON:0002169;1.71e-14;3!UBERON:0004894;1.71e-14;3!UBERON:0001911;2.53e-11;4!UBERON:0009856;3.26e-11;4|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.81e-21,2;UBERON:0002173,3.81e-21,2;UBERON:0002186,3.81e-21,2;UBERON:0000310,6.93e-17,10;UBERON:0001443,1.88e-15,11;UBERON:0004821,1.40e-14,3;UBERON:0003215,1.40e-14,3;UBERON:0010368,1.40e-14,3;UBERON:0009911,1.40e-14,3;UBERON:0002299,1.40e-14,3;UBERON:0006524,1.40e-14,3;UBERON:0008874,1.40e-14,3;UBERON:0002169,1.40e-14,3;UBERON:0004894,1.40e-14,3;UBERON:0001911,2.53e-11,4;UBERON:0005333,2.53e-11,4;UBERON:0008425,2.53e-11,4;UBERON:0005311,2.53e-11,4;UBERON:0000915,1.12e-07,52|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30213880542617,3.84823999983261,0,0,1.77977555204936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,1.40538670403555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,1.2498775702396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p@chr10:9102477..9102481,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_at_chr10:9102477..9102481,- | |||
|id=chr10:9102477..9102481,- | |||
|ontology_enrichment_celltype=CL:1001319!4.75e-10!1;CL:1000600!4.75e-10!1;CL:0002251!3.92e-07!21;CL:0000223!7.50e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.71e-14;3!CL:0002327;2.53e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.40e-14,3;CL:0002327,2.53e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;6.62e-41;1 | |||
|ontology_enrichment_disease=DOID:305!2.30e-19!106;DOID:1749!4.32e-16!14;DOID:0050687!1.14e-13!143;DOID:5093!1.99e-10!4;DOID:1612!1.99e-10!4;DOID:3905!6.88e-10!9;DOID:3908!1.97e-08!5;DOID:7!4.82e-08!39;DOID:162!3.26e-07!235;DOID:14566!5.24e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.01e-40;4!DOID:1612;2.01e-40;4!DOID:3910;5.15e-21;2!DOID:3908;3.10e-09;5!DOID:305;4.52e-08;106!DOID:7;1.05e-07;39!DOID:1325;5.86e-07;7!DOID:3904;5.86e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.22e-40,4;DOID:1612,2.22e-40,4;DOID:3910,3.81e-21,2;DOID:305,5.66e-10,106;DOID:7,5.72e-10,39;DOID:3908,2.74e-09,5;DOID:0050687,1.55e-07,143;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001282!3.61e-10!1;UBERON:0009842!3.61e-10!1;UBERON:0003704!3.61e-10!1;UBERON:0001171!3.61e-10!1;UBERON:0001172!3.61e-10!1;UBERON:0000997!3.96e-10!1;UBERON:0005056!3.96e-10!1;UBERON:0004645!4.75e-10!1;UBERON:0001256!4.75e-10!1;UBERON:0001259!4.75e-10!1;UBERON:0003343!5.97e-10!4;UBERON:0004785!5.97e-10!4;UBERON:0003729!3.92e-08!5;UBERON:0000344!3.14e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0006562;5.15e-21;2!UBERON:0004903;5.15e-21;2!UBERON:0002173;5.15e-21;2!UBERON:0002186;5.15e-21;2!UBERON:0000310;6.65e-17;10!UBERON:0001443;1.81e-15;11!UBERON:0004821;1.71e-14;3!UBERON:0007499;1.71e-14;3!UBERON:0003215;1.71e-14;3!UBERON:0010368;1.71e-14;3!UBERON:0009911;1.71e-14;3!UBERON:0002299;1.71e-14;3!UBERON:0006524;1.71e-14;3!UBERON:0008874;1.71e-14;3!UBERON:0002169;1.71e-14;3!UBERON:0004894;1.71e-14;3!UBERON:0001911;2.53e-11;4!UBERON:0009856;3.26e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.81e-21,2;UBERON:0002173,3.81e-21,2;UBERON:0002186,3.81e-21,2;UBERON:0000310,6.93e-17,10;UBERON:0001443,1.88e-15,11;UBERON:0004821,1.40e-14,3;UBERON:0003215,1.40e-14,3;UBERON:0010368,1.40e-14,3;UBERON:0009911,1.40e-14,3;UBERON:0002299,1.40e-14,3;UBERON:0006524,1.40e-14,3;UBERON:0008874,1.40e-14,3;UBERON:0002169,1.40e-14,3;UBERON:0004894,1.40e-14,3;UBERON:0001911,2.53e-11,4;UBERON:0005333,2.53e-11,4;UBERON:0008425,2.53e-11,4;UBERON:0005311,2.53e-11,4;UBERON:0000915,1.12e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30213880542617,3.84823999983261,0,0,1.77977555204936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,1.40538670403555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,1.2498775702396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:9102477..9102481,- | |||
}} |
Revision as of 14:54, 10 September 2013
Short description: | p@chr10:9102477..9102481, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:9102477..9102481, - |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.40e-14 | 3 |
mammary gland epithelial cell | 2.53e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.81e-21 | 2 |
alveolar duct | 3.81e-21 | 2 |
bronchiole | 3.81e-21 | 2 |
breast | 6.93e-17 | 10 |
chest | 1.88e-15 | 11 |
pulmonary alveolus epithelium | 1.40e-14 | 3 |
alveolus | 1.40e-14 | 3 |
pulmonary lobule | 1.40e-14 | 3 |
lobule | 1.40e-14 | 3 |
alveolus of lung | 1.40e-14 | 3 |
alveolar system | 1.40e-14 | 3 |
pulmonary acinus | 1.40e-14 | 3 |
alveolar sac | 1.40e-14 | 3 |
alveolar wall | 1.40e-14 | 3 |
mammary gland | 2.53e-11 | 4 |
mammary bud | 2.53e-11 | 4 |
mammary ridge | 2.53e-11 | 4 |
mammary placode | 2.53e-11 | 4 |
thoracic segment of trunk | 1.12e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.22e-40 | 4 |
breast cancer | 2.22e-40 | 4 |
lung adenocarcinoma | 3.81e-21 | 2 |
carcinoma | 5.66e-10 | 106 |
disease of anatomical entity | 5.72e-10 | 39 |
non-small cell lung carcinoma | 2.74e-09 | 5 |
cell type cancer | 1.55e-07 | 143 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.