FFCP PHASE1:Hg19::chr10:21581922..21581939,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C49|description=CAGE_peak_at_chr10:21581922..21581939,-|id=chr10:21581922..21581939,-|ontology_enrichment_celltype=CL:0002322!2.38e-10!5|ontology_enrichment_celltype_v019=CL:0002322;1.01e-35;5!CL:0000540;3.60e-17;6!CL:0000404;3.60e-17;6!CL:0000039;4.07e-15;7!CL:0000586;4.07e-15;7!CL:0002321;4.01e-12;15|ontology_enrichment_celltype_v019_2=CL:0002322,1.05e-35,5;CL:0000540,3.14e-17,6;CL:0000031,3.14e-17,6;CL:0000404,3.14e-17,6;CL:0000039,4.17e-15,7;CL:0000586,4.17e-15,7;CL:0000047,4.46e-13,8|ontology_enrichment_development_v019=UBERON:0009117;2.15e-18;10!UBERON:0005564;2.15e-18;10!CL:0000031;3.60e-17;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3095;1.75e-08;22!DOID:2994;1.75e-08;22|ontology_enrichment_disease_v019_2=DOID:3095,1.77e-08,22;DOID:2994,1.77e-08,22|ontology_enrichment_uberon=UBERON:0007023!1.70e-20!115;UBERON:0001017!1.53e-16!82;UBERON:0005743!1.90e-16!86;UBERON:0001049!6.71e-16!57;UBERON:0005068!6.71e-16!57;UBERON:0006241!6.71e-16!57;UBERON:0007135!6.71e-16!57;UBERON:0000073!6.41e-14!94;UBERON:0001016!6.41e-14!94;UBERON:0002298!1.53e-12!8;UBERON:0002616!2.02e-12!59;UBERON:0002346!2.74e-12!90;UBERON:0003075!3.16e-12!86;UBERON:0007284!3.16e-12!86;UBERON:0000955!3.67e-12!69;UBERON:0006238!3.67e-12!69;UBERON:0003080!2.94e-11!42;UBERON:0001893!1.54e-10!34;UBERON:0002020!1.63e-10!34;UBERON:0003528!1.63e-10!34;UBERON:0002780!2.87e-10!41;UBERON:0001890!2.87e-10!41;UBERON:0006240!2.87e-10!41;UBERON:0002791!1.15e-09!33;UBERON:0001869!1.25e-08!32;UBERON:0003056!9.67e-08!61;UBERON:0002619!2.00e-07!22;UBERON:0001950!7.80e-07!20;UBERON:0000153!8.73e-07!129;UBERON:0007811!8.73e-07!129|ontology_enrichment_uberon_v019=UBERON:0000473;2.66e-13;8!UBERON:0005795;3.26e-12;1!UBERON:0003135;7.97e-10;11!UBERON:0000991;7.05e-09;21!UBERON:0000922;3.19e-08;49|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.71e-13,8;UBERON:0003135,8.10e-10,11;UBERON:0000991,7.12e-09,21;UBERON:0009196,7.12e-09,21;UBERON:0009117,7.12e-09,21;UBERON:0005564,7.12e-09,21;UBERON:0004176,1.77e-08,22|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29208379584664,0,0.66944122552934,0,0,0,0.735326160691737,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,2.07355300420312,2.51806559810822,1.39432731443422,0.932949495138334,2.52320850875628,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,1.30788020649984,0.22001485746285,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0.0884575645033392,0,0,0,0,0.404406797884062,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0.189559738885464,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0.176512253383001,0.225980740780532,0,0,0.253243183823515,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.201550417460179,0,2.32991899054908,0,0,0,0,0,0,0.681017030557878,1.28602518772015,1.92555211236127,3.32352270423348,0,0,0.303747783290123,0.335434687599266,0.0788057072991982,0.367182116944987,0,0.717149357331379,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.13223260174269,0.342173675768659,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.122026264901963,0.1251909307065,1.72022758707021,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr10:21581922..21581939,- | |||
|id=chr10:21581922..21581939,- | |||
|ontology_enrichment_celltype=CL:0002322!2.38e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.01e-35;5!CL:0000540;3.60e-17;6!CL:0000404;3.60e-17;6!CL:0000039;4.07e-15;7!CL:0000586;4.07e-15;7!CL:0002321;4.01e-12;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.05e-35,5;CL:0000540,3.14e-17,6;CL:0000031,3.14e-17,6;CL:0000404,3.14e-17,6;CL:0000039,4.17e-15,7;CL:0000586,4.17e-15,7;CL:0000047,4.46e-13,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.15e-18;10!UBERON:0005564;2.15e-18;10!CL:0000031;3.60e-17;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;1.75e-08;22!DOID:2994;1.75e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.77e-08,22;DOID:2994,1.77e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.70e-20!115;UBERON:0001017!1.53e-16!82;UBERON:0005743!1.90e-16!86;UBERON:0001049!6.71e-16!57;UBERON:0005068!6.71e-16!57;UBERON:0006241!6.71e-16!57;UBERON:0007135!6.71e-16!57;UBERON:0000073!6.41e-14!94;UBERON:0001016!6.41e-14!94;UBERON:0002298!1.53e-12!8;UBERON:0002616!2.02e-12!59;UBERON:0002346!2.74e-12!90;UBERON:0003075!3.16e-12!86;UBERON:0007284!3.16e-12!86;UBERON:0000955!3.67e-12!69;UBERON:0006238!3.67e-12!69;UBERON:0003080!2.94e-11!42;UBERON:0001893!1.54e-10!34;UBERON:0002020!1.63e-10!34;UBERON:0003528!1.63e-10!34;UBERON:0002780!2.87e-10!41;UBERON:0001890!2.87e-10!41;UBERON:0006240!2.87e-10!41;UBERON:0002791!1.15e-09!33;UBERON:0001869!1.25e-08!32;UBERON:0003056!9.67e-08!61;UBERON:0002619!2.00e-07!22;UBERON:0001950!7.80e-07!20;UBERON:0000153!8.73e-07!129;UBERON:0007811!8.73e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.66e-13;8!UBERON:0005795;3.26e-12;1!UBERON:0003135;7.97e-10;11!UBERON:0000991;7.05e-09;21!UBERON:0000922;3.19e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.71e-13,8;UBERON:0003135,8.10e-10,11;UBERON:0000991,7.12e-09,21;UBERON:0009196,7.12e-09,21;UBERON:0009117,7.12e-09,21;UBERON:0005564,7.12e-09,21;UBERON:0004176,1.77e-08,22 | |||
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|short_description=p@chr10:21581922..21581939,- | |||
}} |
Revision as of 12:49, 10 September 2013
Short description: | p@chr10:21581922..21581939, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:21581922..21581939, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.05e-35 | 5 |
neuron | 3.14e-17 | 6 |
neuroblast | 3.14e-17 | 6 |
electrically signaling cell | 3.14e-17 | 6 |
germ line cell | 4.17e-15 | 7 |
germ cell | 4.17e-15 | 7 |
neuronal stem cell | 4.46e-13 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 2.71e-13 | 8 |
male reproductive organ | 8.10e-10 | 11 |
gonad | 7.12e-09 | 21 |
indifferent external genitalia | 7.12e-09 | 21 |
indifferent gonad | 7.12e-09 | 21 |
gonad primordium | 7.12e-09 | 21 |
external genitalia | 1.77e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.77e-08 | 22 |
germ cell cancer | 1.77e-08 | 22 |
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