FFCP PHASE1:Hg19::chr10:28034450..28034462,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C199|description=CAGE_peak_at_chr10:28034450..28034462,+|id=chr10:28034450..28034462,+|ontology_enrichment_celltype=CL:0002622!3.11e-21!3;CL:0000057!6.23e-11!75;CL:0002556!8.78e-11!6;CL:0002620!2.42e-10!23;CL:0000499!9.32e-09!27;CL:0002574!1.41e-08!1|ontology_enrichment_celltype_v019=CL:0002574;2.97e-19;1!CL:1000487;2.60e-10;2!CL:0000135;2.71e-07;3!CL:0000388;2.71e-07;3|ontology_enrichment_celltype_v019_2=CL:0002574,2.25e-19,1;CL:1000487,2.49e-10,2;CL:0000135,2.97e-07,3;CL:0000388,2.97e-07,3|ontology_enrichment_development_v019=UBERON:0006238;1.20e-07;10|ontology_enrichment_disease=DOID:6193!1.88e-08!1;DOID:4235!2.69e-08!1|ontology_enrichment_disease_v019=DOID:6193;2.97e-19;1!DOID:3350;2.60e-10;2!DOID:3307;2.60e-10;2!DOID:3093;4.43e-07;11|ontology_enrichment_disease_v019_2=DOID:6193,4.69e-19,1;DOID:3307,1.89e-10,2;DOID:3350,3.27e-10,2;DOID:3093,4.43e-07,11|ontology_enrichment_uberon=UBERON:0002367!1.32e-15!11;UBERON:0010147!1.32e-15!11;UBERON:0009846!1.32e-15!11;UBERON:0003353!1.32e-15!11;UBERON:0004902!1.32e-15!11;UBERON:0003820!1.32e-15!11;UBERON:0009847!1.32e-15!11;UBERON:0003102!2.64e-15!95;UBERON:0003937!2.70e-14!12;UBERON:0005399!2.70e-14!12;UBERON:0000162!3.15e-12!14;UBERON:0001353!3.15e-12!14;UBERON:0000163!3.15e-12!14;UBERON:0006866!3.15e-12!14;UBERON:0000164!3.15e-12!14;UBERON:0000931!3.15e-12!14;UBERON:0004122!2.12e-11!15;UBERON:0001758!8.78e-11!6;UBERON:0003672!8.78e-11!6;UBERON:0001046!5.86e-09!19;UBERON:0000161!8.80e-09!35;UBERON:0003101!1.05e-07!22;UBERON:0000079!1.05e-07!22|ontology_enrichment_uberon_v019=UBERON:0007846;2.71e-07;3!UBERON:0000043;2.71e-07;3!UBERON:0007845;2.71e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.97e-07,3;UBERON:0000043,2.97e-07,3;UBERON:0007845,2.97e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0.30648779579902,0.300476117813194,0,0,0,0,0,0,1.03056216018252,2.79175284497385,0,0,0,0.0920498986422993,0,0.710019185033229,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,1.30325421702124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574072240823034,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22849920267187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0319161948297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70797665509179,5.85775939349066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3874554964103,1.9307228228694,0,0,0,0,0,0,0|short_description=p@chr10:28034450..28034462,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C199 | |||
|description=CAGE_peak_at_chr10:28034450..28034462,+ | |||
|id=chr10:28034450..28034462,+ | |||
|ontology_enrichment_celltype=CL:0002622!3.11e-21!3;CL:0000057!6.23e-11!75;CL:0002556!8.78e-11!6;CL:0002620!2.42e-10!23;CL:0000499!9.32e-09!27;CL:0002574!1.41e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002574;2.97e-19;1!CL:1000487;2.60e-10;2!CL:0000135;2.71e-07;3!CL:0000388;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002574,2.25e-19,1;CL:1000487,2.49e-10,2;CL:0000135,2.97e-07,3;CL:0000388,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.20e-07;10 | |||
|ontology_enrichment_disease=DOID:6193!1.88e-08!1;DOID:4235!2.69e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:6193;2.97e-19;1!DOID:3350;2.60e-10;2!DOID:3307;2.60e-10;2!DOID:3093;4.43e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,4.69e-19,1;DOID:3307,1.89e-10,2;DOID:3350,3.27e-10,2;DOID:3093,4.43e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0002367!1.32e-15!11;UBERON:0010147!1.32e-15!11;UBERON:0009846!1.32e-15!11;UBERON:0003353!1.32e-15!11;UBERON:0004902!1.32e-15!11;UBERON:0003820!1.32e-15!11;UBERON:0009847!1.32e-15!11;UBERON:0003102!2.64e-15!95;UBERON:0003937!2.70e-14!12;UBERON:0005399!2.70e-14!12;UBERON:0000162!3.15e-12!14;UBERON:0001353!3.15e-12!14;UBERON:0000163!3.15e-12!14;UBERON:0006866!3.15e-12!14;UBERON:0000164!3.15e-12!14;UBERON:0000931!3.15e-12!14;UBERON:0004122!2.12e-11!15;UBERON:0001758!8.78e-11!6;UBERON:0003672!8.78e-11!6;UBERON:0001046!5.86e-09!19;UBERON:0000161!8.80e-09!35;UBERON:0003101!1.05e-07!22;UBERON:0000079!1.05e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.71e-07;3!UBERON:0000043;2.71e-07;3!UBERON:0007845;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.97e-07,3;UBERON:0000043,2.97e-07,3;UBERON:0007845,2.97e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0.30648779579902,0.300476117813194,0,0,0,0,0,0,1.03056216018252,2.79175284497385,0,0,0,0.0920498986422993,0,0.710019185033229,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,1.30325421702124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574072240823034,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22849920267187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0319161948297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70797665509179,5.85775939349066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3874554964103,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:28034450..28034462,+ | |||
}} |
Revision as of 13:01, 10 September 2013
Short description: | p@chr10:28034450..28034462, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:28034450..28034462, + |
Coexpression cluster: | C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell of pancreas | 2.25e-19 | 1 |
smooth muscle cell of prostate | 2.49e-10 | 2 |
fibrocyte | 2.97e-07 | 3 |
tendon cell | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.97e-07 | 3 |
tendon | 2.97e-07 | 3 |
regular connective tissue | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 4.69e-19 | 1 |
teratoma | 1.89e-10 | 2 |
mesenchymal cell neoplasm | 3.27e-10 | 2 |
nervous system cancer | 4.43e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.