FFCP PHASE1:Hg19::chr11:2018942..2018960,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=Q9UHT2|association_with_transcript=457bp_to_AF118081_5end|coexpression_cluster_id=C2119|description=CAGE_peak_10_at_AF118081_5end|id=chr11:2018942..2018960,+|ontology_enrichment_celltype=CL:0000188!2.21e-09!9;CL:0000349!5.08e-07!3;CL:0002577!5.08e-07!3|ontology_enrichment_celltype_v019=CL:0002536;4.97e-11;2!CL:0000349;2.31e-09;19|ontology_enrichment_celltype_v019_2=CL:0002536,2.97e-11,2;CL:0000349,1.97e-09,19|ontology_enrichment_development_v019=UBERON:0008947;2.28e-16;29!UBERON:0000358;5.89e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1799;6.58e-07;1!DOID:10165;6.58e-07;1!DOID:1798;6.58e-07;1|ontology_enrichment_disease_v019_2=DOID:1799,6.59e-07,1;DOID:10165,6.59e-07,1;DOID:1798,6.59e-07,1|ontology_enrichment_uberon=UBERON:0001737!1.35e-19!9;UBERON:0001557!2.06e-19!19;UBERON:0005631!5.58e-16!14;UBERON:0000158!5.58e-16!14;UBERON:0003124!1.21e-13!7;UBERON:0000478!5.67e-12!24;UBERON:0000072!4.02e-09!46;UBERON:0001987!1.16e-08!4;UBERON:0004340!1.16e-08!4;UBERON:0000974!1.74e-08!10;UBERON:0000077!1.80e-08!130;UBERON:0000065!2.71e-08!53;UBERON:0001041!3.00e-08!98;UBERON:0004119!7.09e-08!169;UBERON:0000925!7.09e-08!169;UBERON:0006595!7.09e-08!169;UBERON:0001723!2.17e-07!3;UBERON:0001033!2.17e-07!3;UBERON:0010056!2.17e-07!3;UBERON:0003104!2.48e-07!238;UBERON:0009142!2.48e-07!238;UBERON:0001004!3.40e-07!72;UBERON:0004921!5.11e-07!129;UBERON:0004185!5.11e-07!129;UBERON:0001007!8.79e-07!155;UBERON:0001555!8.79e-07!155;UBERON:0007026!8.79e-07!155|ontology_enrichment_uberon_v019=UBERON:0001737;5.18e-46;9!UBERON:0001557;5.18e-46;9!UBERON:0000072;1.56e-11;37!UBERON:0000478;6.88e-10;24!UBERON:0000065;1.02e-09;44!UBERON:0005631;1.84e-08;10!UBERON:0000158;1.84e-08;10!UBERON:0001004;2.30e-08;65!UBERON:0001723;2.87e-08;3!UBERON:0001033;2.87e-08;3!UBERON:0000305;3.96e-07;7!UBERON:0000922;4.10e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.77e-46,9;UBERON:0001557,1.14e-31,19;UBERON:0000072,8.37e-14,47;UBERON:0001041,1.37e-13,87;UBERON:0008947,4.88e-12,38;UBERON:0003258,4.88e-12,38;UBERON:0000065,1.07e-11,54;UBERON:0004921,1.39e-11,118;UBERON:0001007,5.04e-11,145;UBERON:0001555,5.04e-11,145;UBERON:0007026,5.04e-11,145;UBERON:0004119,8.85e-11,160;UBERON:0000925,8.85e-11,160;UBERON:0006595,8.85e-11,160;UBERON:0000478,5.93e-10,24;UBERON:0001004,2.33e-09,74;UBERON:0005631,2.67e-09,14;UBERON:0000158,2.67e-09,14;UBERON:0001723,2.77e-08,3;UBERON:0001033,2.77e-08,3;UBERON:0010056,2.77e-08,3;UBERON:0000305,3.07e-07,7|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,1.74753097704138,2.90143676051299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,2.30470369792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,2.36613600079688,3.20310911148393,4.57920956778616,3.08823123650703,2.39667388501647,4.03360052488864,2.83145747136345,5.101758093259,2.69323009862473,0,0,0.4115740113314,1.47008711385542,0,0,1.18157981336281,0,0,0,0,0,0,2.59247646443883,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17048642156577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,1.43833425785268,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.981531933753119,0,0,0,0,0,0,0,0,0,0,0,0,0.783204629850962,1.71571711905428,0,0,0,0.303127571446259,6.65741758041988,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48335359146061,0,0.614014698904518,0.551346289938122,0.107420244868274,0.145016693914229,0.0852266274161009,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,3.68592842519078,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3037684630641,0.638002319463839,0.0915975934018623,3.73124343213044,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,3.19695375331408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,10.6005511129777,0,0,0,0,0,0.157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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt=Q9UHT2 | |||
|association_with_transcript=457bp_to_AF118081_5end | |||
|coexpression_cluster_id=C2119 | |||
|description=CAGE_peak_10_at_AF118081_5end | |||
|id=chr11:2018942..2018960,+ | |||
|ontology_enrichment_celltype=CL:0000188!2.21e-09!9;CL:0000349!5.08e-07!3;CL:0002577!5.08e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002536;4.97e-11;2!CL:0000349;2.31e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,2.97e-11,2;CL:0000349,1.97e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.28e-16;29!UBERON:0000358;5.89e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;6.58e-07;1!DOID:10165;6.58e-07;1!DOID:1798;6.58e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,6.59e-07,1;DOID:10165,6.59e-07,1;DOID:1798,6.59e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.35e-19!9;UBERON:0001557!2.06e-19!19;UBERON:0005631!5.58e-16!14;UBERON:0000158!5.58e-16!14;UBERON:0003124!1.21e-13!7;UBERON:0000478!5.67e-12!24;UBERON:0000072!4.02e-09!46;UBERON:0001987!1.16e-08!4;UBERON:0004340!1.16e-08!4;UBERON:0000974!1.74e-08!10;UBERON:0000077!1.80e-08!130;UBERON:0000065!2.71e-08!53;UBERON:0001041!3.00e-08!98;UBERON:0004119!7.09e-08!169;UBERON:0000925!7.09e-08!169;UBERON:0006595!7.09e-08!169;UBERON:0001723!2.17e-07!3;UBERON:0001033!2.17e-07!3;UBERON:0010056!2.17e-07!3;UBERON:0003104!2.48e-07!238;UBERON:0009142!2.48e-07!238;UBERON:0001004!3.40e-07!72;UBERON:0004921!5.11e-07!129;UBERON:0004185!5.11e-07!129;UBERON:0001007!8.79e-07!155;UBERON:0001555!8.79e-07!155;UBERON:0007026!8.79e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.18e-46;9!UBERON:0001557;5.18e-46;9!UBERON:0000072;1.56e-11;37!UBERON:0000478;6.88e-10;24!UBERON:0000065;1.02e-09;44!UBERON:0005631;1.84e-08;10!UBERON:0000158;1.84e-08;10!UBERON:0001004;2.30e-08;65!UBERON:0001723;2.87e-08;3!UBERON:0001033;2.87e-08;3!UBERON:0000305;3.96e-07;7!UBERON:0000922;4.10e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.77e-46,9;UBERON:0001557,1.14e-31,19;UBERON:0000072,8.37e-14,47;UBERON:0001041,1.37e-13,87;UBERON:0008947,4.88e-12,38;UBERON:0003258,4.88e-12,38;UBERON:0000065,1.07e-11,54;UBERON:0004921,1.39e-11,118;UBERON:0001007,5.04e-11,145;UBERON:0001555,5.04e-11,145;UBERON:0007026,5.04e-11,145;UBERON:0004119,8.85e-11,160;UBERON:0000925,8.85e-11,160;UBERON:0006595,8.85e-11,160;UBERON:0000478,5.93e-10,24;UBERON:0001004,2.33e-09,74;UBERON:0005631,2.67e-09,14;UBERON:0000158,2.67e-09,14;UBERON:0001723,2.77e-08,3;UBERON:0001033,2.77e-08,3;UBERON:0010056,2.77e-08,3;UBERON:0000305,3.07e-07,7 | |||
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|short_description=p10@AF118081 | |||
}} |
Revision as of 17:10, 10 September 2013
Short description: | p10@AF118081 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_AF118081_5end |
Coexpression cluster: | C2119_tongue_liver_skeletal_amniotic_diaphragm_chorionic_Placental |
Association with transcript: | 457bp_to_AF118081_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 2.97e-11 | 2 |
extraembryonic cell | 1.97e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.77e-46 | 9 |
upper respiratory tract | 1.14e-31 | 19 |
segment of respiratory tract | 8.37e-14 | 47 |
foregut | 1.37e-13 | 87 |
respiratory primordium | 4.88e-12 | 38 |
endoderm of foregut | 4.88e-12 | 38 |
respiratory tract | 1.07e-11 | 54 |
subdivision of digestive tract | 1.39e-11 | 118 |
digestive system | 5.04e-11 | 145 |
digestive tract | 5.04e-11 | 145 |
primitive gut | 5.04e-11 | 145 |
endoderm-derived structure | 8.85e-11 | 160 |
endoderm | 8.85e-11 | 160 |
presumptive endoderm | 8.85e-11 | 160 |
extraembryonic structure | 5.93e-10 | 24 |
respiratory system | 2.33e-09 | 74 |
extraembryonic membrane | 2.67e-09 | 14 |
membranous layer | 2.67e-09 | 14 |
tongue | 2.77e-08 | 3 |
gustatory system | 2.77e-08 | 3 |
future tongue | 2.77e-08 | 3 |
amnion | 3.07e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 6.59e-07 | 1 |
endocrine pancreas cancer | 6.59e-07 | 1 |
pancreatic endocrine carcinoma | 6.59e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.