FFCP PHASE1:Hg19::chr11:31827535..31827565,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5080|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8620|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000533156_5end|coexpression_cluster_id=C3140|description=CAGE_peak_11_at_PAX6_5end|id=chr11:31827535..31827565,-|ontology_enrichment_celltype=CL:0000306!1.13e-13!4;CL:0002222!1.13e-13!4;CL:0002224!1.13e-13!4;CL:0000128!1.57e-11!7;CL:0000126!1.57e-11!7;CL:0000127!1.57e-11!7;CL:0002453!1.57e-11!7;CL:0000064!5.11e-11!3;CL:0005012!5.11e-11!3;CL:0000067!5.11e-11!3;CL:0002304!5.11e-11!3;CL:0002605!6.83e-11!3;CL:0000075!4.27e-08!27|ontology_enrichment_celltype_v019=CL:0000306;5.02e-44;4!CL:0002222;5.02e-44;4!CL:0002224;5.02e-44;4!CL:0000064;1.17e-34;3!CL:0000067;1.17e-34;3!CL:0005012;1.17e-34;3!CL:0002304;1.17e-34;3!CL:0002605;4.82e-34;3!CL:0000047;1.66e-22;2!CL:0000075;1.37e-19;27!CL:0000128;5.55e-15;7!CL:0000126;5.55e-15;7!CL:0000127;5.55e-15;7!CL:0002319;2.80e-14;25!CL:0000342;1.32e-12;1!CL:0002565;1.32e-12;1!CL:0002535;5.11e-07;2|ontology_enrichment_celltype_v019_2=CL:0000306,6.27e-44,4;CL:0002222,6.27e-44,4;CL:0002224,6.27e-44,4;CL:0000064,1.39e-34,3;CL:0000067,1.39e-34,3;CL:0005012,1.39e-34,3;CL:0002304,1.39e-34,3;CL:0002605,3.85e-34,3;CL:0000075,1.51e-19,27;CL:0000128,5.04e-15,7;CL:0000126,5.04e-15,7;CL:0000127,5.04e-15,7;CL:0002453,5.04e-15,7;CL:0002319,2.61e-14,25;CL:0000133,1.24e-13,59;CL:0000047,9.33e-13,8;CL:0000342,1.25e-12,1;CL:0002565,1.25e-12,1;CL:0000221,4.83e-11,72;CL:0002535,5.11e-07,2|ontology_enrichment_development_v019=CL:0000133;3.58e-09;59|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003075!1.91e-72!86;UBERON:0007284!1.91e-72!86;UBERON:0003056!2.59e-69!61;UBERON:0002346!1.02e-68!90;UBERON:0005743!6.77e-64!86;UBERON:0001049!2.89e-60!57;UBERON:0005068!2.89e-60!57;UBERON:0006241!2.89e-60!57;UBERON:0007135!2.89e-60!57;UBERON:0001017!7.67e-58!82;UBERON:0000073!7.30e-57!94;UBERON:0001016!7.30e-57!94;UBERON:0002616!1.70e-54!59;UBERON:0002780!5.90e-52!41;UBERON:0001890!5.90e-52!41;UBERON:0006240!5.90e-52!41;UBERON:0003080!1.46e-50!42;UBERON:0000955!1.91e-50!69;UBERON:0006238!1.91e-50!69;UBERON:0000033!1.00e-46!123;UBERON:0001893!1.44e-46!34;UBERON:0001869!6.48e-46!32;UBERON:0002791!3.30e-44!33;UBERON:0000153!5.05e-44!129;UBERON:0007811!5.05e-44!129;UBERON:0002020!7.98e-43!34;UBERON:0003528!7.98e-43!34;UBERON:0000956!1.35e-41!25;UBERON:0000203!1.35e-41!25;UBERON:0004121!3.93e-41!169;UBERON:0000924!6.71e-40!173;UBERON:0006601!6.71e-40!173;UBERON:0002619!3.67e-33!22;UBERON:0001950!1.47e-32!20;UBERON:0007625!1.60e-28!11;UBERON:0007023!6.03e-22!115;UBERON:0000970!2.81e-21!20;UBERON:0002104!4.03e-20!21;UBERON:0000019!6.46e-19!19;UBERON:0000047!6.46e-19!19;UBERON:0004088!6.46e-19!19;UBERON:0003072!6.46e-19!19;UBERON:0003071!6.46e-19!19;UBERON:0004128!6.46e-19!19;UBERON:0000020!4.14e-18!23;UBERON:0000200!2.59e-17!6;UBERON:0001032!3.13e-17!24;UBERON:0004456!3.13e-17!24;UBERON:0001456!7.32e-17!21;UBERON:0000064!6.18e-16!219;UBERON:0001801!3.47e-14!14;UBERON:0000488!4.33e-14!4;UBERON:0010077!1.13e-13!4;UBERON:0005389!1.13e-13!4;UBERON:0000484!1.13e-13!4;UBERON:0002546!1.13e-13!4;UBERON:0000965!1.13e-13!4;UBERON:0001803!1.13e-13!4;UBERON:0003073!1.13e-13!4;UBERON:0005426!1.13e-13!4;UBERON:0000483!2.10e-13!309;UBERON:0000119!3.68e-13!312;UBERON:0001871!4.61e-13!7;UBERON:0000025!3.11e-12!194;UBERON:0005085!1.71e-11!29;UBERON:0003076!4.53e-11!15;UBERON:0003057!4.53e-11!15;UBERON:0001778!5.11e-11!3;UBERON:0001775!5.11e-11!3;UBERON:0000475!4.42e-10!365;UBERON:0002021!5.06e-10!5;UBERON:0002771!1.91e-09!3;UBERON:0002203!2.28e-09!6;UBERON:0001768!2.28e-09!6;UBERON:0000477!1.10e-08!286;UBERON:0004111!3.86e-08!241;UBERON:0004733!4.15e-08!12;UBERON:0002028!4.15e-08!12;UBERON:0007277!4.15e-08!12;UBERON:0000481!5.53e-08!347;UBERON:0002680!7.23e-08!9;UBERON:0001895!7.23e-08!9;UBERON:0010092!7.23e-08!9;UBERON:0000922!1.27e-07!612;UBERON:0004732!1.96e-07!13;UBERON:0002200!3.01e-07!11;UBERON:0006876!3.01e-07!11;UBERON:0001870!3.82e-07!2;UBERON:0001905!4.45e-07!2;UBERON:0002757!4.45e-07!2;UBERON:0010134!4.45e-07!2;UBERON:0002784!4.45e-07!2;UBERON:0005408!4.45e-07!2;UBERON:0001899!4.45e-07!2;UBERON:0001894!5.50e-07!7;UBERON:0006222!5.50e-07!7;UBERON:0000063!6.94e-07!97;UBERON:0000076!8.39e-07!8;UBERON:0000062!8.79e-07!511|ontology_enrichment_uberon_v019=UBERON:0007625;1.16e-63;11!UBERON:0001801;6.94e-50;14!UBERON:0000019;3.22e-46;19!UBERON:0000047;3.22e-46;19!UBERON:0004088;3.22e-46;19!UBERON:0010230;3.22e-46;19!UBERON:0000488;1.92e-45;4!UBERON:0010077;5.02e-44;4!UBERON:0005389;5.02e-44;4!UBERON:0000484;5.02e-44;4!UBERON:0000965;5.02e-44;4!UBERON:0001803;5.02e-44;4!UBERON:0000970;7.32e-44;20!UBERON:0002104;9.93e-42;21!UBERON:0001456;9.93e-42;21!UBERON:0000020;5.08e-38;23!UBERON:0001032;2.14e-36;24!UBERON:0004456;2.14e-36;24!UBERON:0001778;1.17e-34;3!UBERON:0001775;1.17e-34;3!UBERON:0002203;1.93e-30;6!UBERON:0001768;1.93e-30;6!UBERON:0002200;1.93e-30;6!UBERON:0010371;7.95e-22;31!UBERON:0006876;9.30e-17;11!UBERON:0001444;7.59e-13;48!UBERON:0002506;1.32e-12;1!UBERON:0001769;1.32e-12;1!UBERON:0000033;1.38e-09;50!UBERON:0000153;3.95e-09;54!UBERON:0007811;2.73e-08;52!UBERON:0006955;5.11e-07;2!UBERON:0004801;5.11e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.48e-63,11;UBERON:0001801,8.41e-50,14;UBERON:0000488,2.16e-45,4;UBERON:0010077,6.27e-44,4;UBERON:0005389,6.27e-44,4;UBERON:0000484,6.27e-44,4;UBERON:0002546,6.27e-44,4;UBERON:0000965,6.27e-44,4;UBERON:0001803,6.27e-44,4;UBERON:0003073,6.27e-44,4;UBERON:0005426,6.27e-44,4;UBERON:0000019,8.95e-44,20;UBERON:0000047,8.95e-44,20;UBERON:0010312,8.95e-44,20;UBERON:0004088,8.95e-44,20;UBERON:0010230,8.95e-44,20;UBERON:0003072,8.95e-44,20;UBERON:0004128,8.95e-44,20;UBERON:0003071,8.95e-44,20;UBERON:0000970,1.20e-41,21;UBERON:0002104,1.20e-41,21;UBERON:0001456,1.04e-39,22;UBERON:0000020,2.52e-36,24;UBERON:0001032,2.52e-36,24;UBERON:0004456,2.52e-36,24;UBERON:0001778,1.39e-34,3;UBERON:0001775,1.39e-34,3;UBERON:0002203,2.08e-30,6;UBERON:0001768,2.08e-30,6;UBERON:0002200,2.08e-30,6;UBERON:0005085,6.66e-28,31;UBERON:0003056,3.62e-24,61;UBERON:0000076,3.55e-22,8;UBERON:0003075,1.21e-17,82;UBERON:0007284,1.21e-17,82;UBERON:0001444,2.84e-17,49;UBERON:0002346,9.37e-17,86;UBERON:0006876,9.69e-17,11;UBERON:0000033,5.60e-15,56;UBERON:0010371,1.35e-13,104;UBERON:0000153,2.01e-13,62;UBERON:0007811,2.01e-13,62;UBERON:0002506,1.25e-12,1;UBERON:0001769,1.25e-12,1;UBERON:0004121,2.97e-12,171;UBERON:0000924,2.97e-12,171;UBERON:0006601,2.97e-12,171;UBERON:0010314,2.27e-10,132;UBERON:0006955,5.11e-07,2;UBERON:0004801,5.11e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.612002073732759,0,8.87331560106276,4.79060487755095,3.64073654824928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.50813354476611,9.97782288581538,6.0606002128257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.725627385107593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.34800898104545,0,0,0,0,0,0,2.88662684050547,7.07175470347969,2.23076519048061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,1.30139853857622,0,1.84267891867784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.656029291399411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,8.56571342704538,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.331737779793674,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0.104421949505455,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0.316553979779393,0,0,0,0,0,4.58146384663663,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.876336514945499,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.957803154342908,0.41023272848151,0.252071696221718,0.484100767249525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.126831620387814,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.263091094251396,0,0,0,0.157115589916002,0,0,0,0,4.43154573895269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54596118010839,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p11@PAX6}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5080 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000533156_5end | |||
|coexpression_cluster_id=C3140 | |||
|description=CAGE_peak_11_at_PAX6_5end | |||
|id=chr11:31827535..31827565,- | |||
|ontology_enrichment_celltype=CL:0000306!1.13e-13!4;CL:0002222!1.13e-13!4;CL:0002224!1.13e-13!4;CL:0000128!1.57e-11!7;CL:0000126!1.57e-11!7;CL:0000127!1.57e-11!7;CL:0002453!1.57e-11!7;CL:0000064!5.11e-11!3;CL:0005012!5.11e-11!3;CL:0000067!5.11e-11!3;CL:0002304!5.11e-11!3;CL:0002605!6.83e-11!3;CL:0000075!4.27e-08!27 | |||
|ontology_enrichment_celltype_v019=CL:0000306;5.02e-44;4!CL:0002222;5.02e-44;4!CL:0002224;5.02e-44;4!CL:0000064;1.17e-34;3!CL:0000067;1.17e-34;3!CL:0005012;1.17e-34;3!CL:0002304;1.17e-34;3!CL:0002605;4.82e-34;3!CL:0000047;1.66e-22;2!CL:0000075;1.37e-19;27!CL:0000128;5.55e-15;7!CL:0000126;5.55e-15;7!CL:0000127;5.55e-15;7!CL:0002319;2.80e-14;25!CL:0000342;1.32e-12;1!CL:0002565;1.32e-12;1!CL:0002535;5.11e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,6.27e-44,4;CL:0002222,6.27e-44,4;CL:0002224,6.27e-44,4;CL:0000064,1.39e-34,3;CL:0000067,1.39e-34,3;CL:0005012,1.39e-34,3;CL:0002304,1.39e-34,3;CL:0002605,3.85e-34,3;CL:0000075,1.51e-19,27;CL:0000128,5.04e-15,7;CL:0000126,5.04e-15,7;CL:0000127,5.04e-15,7;CL:0002453,5.04e-15,7;CL:0002319,2.61e-14,25;CL:0000133,1.24e-13,59;CL:0000047,9.33e-13,8;CL:0000342,1.25e-12,1;CL:0002565,1.25e-12,1;CL:0000221,4.83e-11,72;CL:0002535,5.11e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000133;3.58e-09;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p11@PAX6 | |||
}} |
Revision as of 17:26, 10 September 2013
Short description: | p11@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_PAX6_5end |
Coexpression cluster: | C3140_argyrophil_Lens_Ciliary_eye_small_Astrocyte_Iris |
Association with transcript: | 0bp_to_ENST00000533156_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 6.27e-44 | 4 |
vertebrate lens cell | 6.27e-44 | 4 |
lens epithelial cell | 6.27e-44 | 4 |
ciliated cell | 1.39e-34 | 3 |
ciliated epithelial cell | 1.39e-34 | 3 |
multi-ciliated epithelial cell | 1.39e-34 | 3 |
non-pigmented ciliary epithelial cell | 1.39e-34 | 3 |
astrocyte of the cerebral cortex | 3.85e-34 | 3 |
columnar/cuboidal epithelial cell | 1.51e-19 | 27 |
oligodendrocyte | 5.04e-15 | 7 |
macroglial cell | 5.04e-15 | 7 |
astrocyte | 5.04e-15 | 7 |
oligodendrocyte precursor cell | 5.04e-15 | 7 |
neural cell | 2.61e-14 | 25 |
neurectodermal cell | 1.24e-13 | 59 |
neuronal stem cell | 9.33e-13 | 8 |
pigment cell (sensu Vertebrata) | 1.25e-12 | 1 |
iris pigment epithelial cell | 1.25e-12 | 1 |
ectodermal cell | 4.83e-11 | 72 |
epithelial cell of cervix | 5.11e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.