FFCP PHASE1:Hg19::chr11:45825616..45825645,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55343|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20197|TSSclassifier=S|UniProt=B2RDB2,E9PS26,Q96A29|association_with_transcript=0bp_to_ENST00000442528,ENST00000456334,ENST00000526817,NM_001145265,NM_001145266,uc001nbo.2,uc010rgm.1_5end|coexpression_cluster_id=C5|description=CAGE_peak_4_at_SLC35C1_5end|id=chr11:45825616..45825645,+|ontology_enrichment_celltype=CL:0000055!8.89e-09!180;CL:0000057!3.36e-07!75|ontology_enrichment_celltype_v019=CL:0000136;7.42e-10;13!CL:0000784;2.78e-08;3|ontology_enrichment_celltype_v019_2=CL:0000136,1.21e-10,15;CL:0000784,2.58e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!5.27e-08!365;UBERON:0000481!2.19e-07!347;UBERON:0000468!3.79e-07!659;UBERON:0005256!7.80e-07!143|ontology_enrichment_uberon_v019=UBERON:0002107;2.55e-10;19!UBERON:0006925;2.55e-10;19!UBERON:0002423;6.24e-09;25|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.26e-10,19;UBERON:0006925,2.26e-10,19;UBERON:0008836,2.26e-10,19;UBERON:0009497,5.31e-09,25;UBERON:0000015,5.31e-09,25;UBERON:0002423,5.31e-09,25;UBERON:0006235,5.31e-09,25;UBERON:0004161,5.31e-09,25;UBERON:0007499,8.69e-09,25;UBERON:0008835,1.22e-08,22;UBERON:0003894,1.22e-08,22;UBERON:0009856,2.38e-08,26;UBERON:0009854,3.65e-08,23;UBERON:0003929,6.55e-07,54|phase1_expression=2.90685406832891,0.856402095563933,1.69145284915165,0,1.78784437770915,1.74467704820074,0,0,0,1.22866968250754,4.18680700783456,0.655324116390517,0.791300934685361,0.495065411840187,0,0,0,0,0,0.492484232307152,0.408001382488506,0.313454721478088,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0.383587685530591,1.44575660953827,1.50401373190767,0.434539556882471,1.5905718941022,1.45990461090791,0.189069634328136,0.886917589850256,1.14185221401064,0.392937226493138,0,0,0,0.174129737299267,0.132957960518865,4.5313218618015,3.43196946468077,7.4291500265913,0.39752481473341,0.860234595106124,1.38856200643038,0.56530794192401,1.25849830862972,0,0.626984899610432,0,0,0,0,0,0,0.367663080345869,0,0,0.673588117878509,0.225222960966644,0,0,0.366403487860815,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.573673241497627,0,1.68203280042692,1.06748995729705,0.49333509683432,0,0.269421344139376,0.163461903113459,0.605429710579726,1.15235184896,0,0.624320153660641,0,0,0.352303495931295,0.485618833104395,0.280901613404497,0.408308342509787,1.10550885580591,0.206651562351531,0,0,0.910161361938026,1.43723628363248,0.168336113954066,0.125118519871964,0.277064115484183,0,0.612975591598039,0.300476117813194,0.226864366320042,0.89694817844431,0.213557388818567,1.05965950579781,0.300091096084402,0.618315175430633,1.03056216018252,0.558350568994769,0,0,0.504867548488229,0.184099797284599,0.323292113637624,0.710019185033229,0.302256294682921,0.508681776931463,0.57978255948989,0.818238361772504,0.286804595389004,0.487894824518382,0.795178609928912,0.464775771478074,0.207322110030741,0.252320850875628,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,2.8810180793198,2.94017422771084,10.1404027857465,29.4848165003288,10.6342183202653,0,0.737930631258681,0.343135620597051,0,0,0,0,0.325808305310325,2.07986957055916,1.44331342025273,0.463721619900307,1.40890433082986,0,0,0,0.790204397959275,0.858486162094873,0.246217006087397,0.234004265139238,0.148631162288728,0.93733833986777,1.17587489739202,0.567100388969546,0,0.290633938513962,0,0,0,0,0,0.12624243342638,0.253991577168676,0.381988425558278,1.17217447210047,0,0.308482478109971,0,1.14330573052231,0.112131084345361,0.43596006883328,0.1466765716419,0.775630294546667,0,0,0.797814349754612,1.04007436911366,0.514414748524284,0,0.532844358032199,1.42977993658148,1.62786481617433,0.823240336780769,1.30294473717494,3.19852753868291,0,0.904318131178758,0.871533458600294,0.299918973546171,0,1.50677127429638,0,0.958499421966331,1.14861935834114,0,0.289562613335158,0.410952645100767,0.358121926479791,0,0,0,0.128343036279748,0,1.30139853857622,0,0.670065061337395,0,0,0,0,0.858840442033979,0.500170521059677,0.271265023699736,1.45579603071565,1.07057393278297,1.57702415033935,0.234282829985426,0.300946099727719,0,0,1.99267679560631,0.553107505625109,0.434418072340414,0,0,0,0.215714200818617,0.106727557803444,1.81876542867756,0,0.604780586659361,0.992431231275107,1.68808170616869,0.280660094433074,1.28139149255701,0.511707249066704,0.965123526861645,2.96836132889982,0.462629081407967,0.710246901252508,0.657017248110473,0.519254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,1.36893320434112,0.26940821205835,2.00822175099494,0,0.244209805832924,0.106727345877715,1.9307228228694,0.179650404213174,2.34640942403454,0.611207220914332,0.813792356631477,0.665756774185513,0.402547587182052,0|short_description=p4@SLC35C1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55343 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20197 | |||
|TSSclassifier=S | |||
|UniProt=B2RDB2,E9PS26,Q96A29 | |||
|association_with_transcript=0bp_to_ENST00000442528,ENST00000456334,ENST00000526817,NM_001145265,NM_001145266,uc001nbo.2,uc010rgm.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_SLC35C1_5end | |||
|id=chr11:45825616..45825645,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.89e-09!180;CL:0000057!3.36e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000136;7.42e-10;13!CL:0000784;2.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.21e-10,15;CL:0000784,2.58e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.27e-08!365;UBERON:0000481!2.19e-07!347;UBERON:0000468!3.79e-07!659;UBERON:0005256!7.80e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.55e-10;19!UBERON:0006925;2.55e-10;19!UBERON:0002423;6.24e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.26e-10,19;UBERON:0006925,2.26e-10,19;UBERON:0008836,2.26e-10,19;UBERON:0009497,5.31e-09,25;UBERON:0000015,5.31e-09,25;UBERON:0002423,5.31e-09,25;UBERON:0006235,5.31e-09,25;UBERON:0004161,5.31e-09,25;UBERON:0007499,8.69e-09,25;UBERON:0008835,1.22e-08,22;UBERON:0003894,1.22e-08,22;UBERON:0009856,2.38e-08,26;UBERON:0009854,3.65e-08,23;UBERON:0003929,6.55e-07,54 | |||
|phase1_expression=2.90685406832891,0.856402095563933,1.69145284915165,0,1.78784437770915,1.74467704820074,0,0,0,1.22866968250754,4.18680700783456,0.655324116390517,0.791300934685361,0.495065411840187,0,0,0,0,0,0.492484232307152,0.408001382488506,0.313454721478088,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0.383587685530591,1.44575660953827,1.50401373190767,0.434539556882471,1.5905718941022,1.45990461090791,0.189069634328136,0.886917589850256,1.14185221401064,0.392937226493138,0,0,0,0.174129737299267,0.132957960518865,4.5313218618015,3.43196946468077,7.4291500265913,0.39752481473341,0.860234595106124,1.38856200643038,0.56530794192401,1.25849830862972,0,0.626984899610432,0,0,0,0,0,0,0.367663080345869,0,0,0.673588117878509,0.225222960966644,0,0,0.366403487860815,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.573673241497627,0,1.68203280042692,1.06748995729705,0.49333509683432,0,0.269421344139376,0.163461903113459,0.605429710579726,1.15235184896,0,0.624320153660641,0,0,0.352303495931295,0.485618833104395,0.280901613404497,0.408308342509787,1.10550885580591,0.206651562351531,0,0,0.910161361938026,1.43723628363248,0.168336113954066,0.125118519871964,0.277064115484183,0,0.612975591598039,0.300476117813194,0.226864366320042,0.89694817844431,0.213557388818567,1.05965950579781,0.300091096084402,0.618315175430633,1.03056216018252,0.558350568994769,0,0,0.504867548488229,0.184099797284599,0.323292113637624,0.710019185033229,0.302256294682921,0.508681776931463,0.57978255948989,0.818238361772504,0.286804595389004,0.487894824518382,0.795178609928912,0.464775771478074,0.207322110030741,0.252320850875628,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,2.8810180793198,2.94017422771084,10.1404027857465,29.4848165003288,10.6342183202653,0,0.737930631258681,0.343135620597051,0,0,0,0,0.325808305310325,2.07986957055916,1.44331342025273,0.463721619900307,1.40890433082986,0,0,0,0.790204397959275,0.858486162094873,0.246217006087397,0.234004265139238,0.148631162288728,0.93733833986777,1.17587489739202,0.567100388969546,0,0.290633938513962,0,0,0,0,0,0.12624243342638,0.253991577168676,0.381988425558278,1.17217447210047,0,0.308482478109971,0,1.14330573052231,0.112131084345361,0.43596006883328,0.1466765716419,0.775630294546667,0,0,0.797814349754612,1.04007436911366,0.514414748524284,0,0.532844358032199,1.42977993658148,1.62786481617433,0.823240336780769,1.30294473717494,3.19852753868291,0,0.904318131178758,0.871533458600294,0.299918973546171,0,1.50677127429638,0,0.958499421966331,1.14861935834114,0,0.289562613335158,0.410952645100767,0.358121926479791,0,0,0,0.128343036279748,0,1.30139853857622,0,0.670065061337395,0,0,0,0,0.858840442033979,0.500170521059677,0.271265023699736,1.45579603071565,1.07057393278297,1.57702415033935,0.234282829985426,0.300946099727719,0,0,1.99267679560631,0.553107505625109,0.434418072340414,0,0,0,0.215714200818617,0.106727557803444,1.81876542867756,0,0.604780586659361,0.992431231275107,1.68808170616869,0.280660094433074,1.28139149255701,0.511707249066704,0.965123526861645,2.96836132889982,0.462629081407967,0.710246901252508,0.657017248110473,0.519254429183621,0.697262270759755,0.604297247958111,0.601519410909855,0,4.47776347841966,0.910455840033585,1.57349297951309,0,0.231046011313244,0,0,0.316654886678627,0,0.170093705276516,0.431831832204279,0,0.541892875087706,2.00675909541941,0.764628819135115,0,0.223874754722178,0,0,0,0.328014645699706,0.976135183992909,1.03041011647722,0,0.330037999682352,0.574265537996172,0,3.21367859688319,0.676695028044854,0.154048617114644,0.307007349452259,0.137836572484531,0.429680979473094,0,0.170453254832202,0.712256285173899,0.165284915360978,0.960950336825531,0.510450849978337,0.2023155617111,0,0.62962469366128,0,0.616067160352178,0,0,0,0.286249773483982,0.372158369359667,0.632758849437452,2.2875623270859,0.255897791311334,0.855877976067841,0.95460974377781,0,2.15846949099978,2.74537029736055,0.706874414074119,0.606547444719948,0,0,3.41343617362713,0.974853958525138,0,0.409499734223957,2.82810863907426,0,0.551365343546124,0,0,0.578775534266688,0,0.405820753925408,0,0.281695602532241,0.573645408816206,0.88424136911809,1.07001315444375,0,0.844430541190656,0,0.75894634753143,1.39973888097993,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4906390476222,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0.111308705022906,0,0,0.398495976502139,0.552567831062295,0,0,0,0.311039587661807,0.179736702294654,0,0,0.295930216910801,0,0,1.93866549219044,0.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| |||
|short_description=p4@SLC35C1 | |||
}} |
Revision as of 17:51, 10 September 2013
Short description: | p4@SLC35C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SLC35C1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000442528, ENST00000456334, ENST00000526817, NM_001145265, NM_001145266, uc001nbo.2, uc010rgm.1_5end |
EntrezGene: | SLC35C1 |
HGNC: | 20197 |
UniProt: | B2RDB2E9PS26Q96A29 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.21e-10 | 15 |
plasmacytoid dendritic cell | 2.58e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 2.26e-10 | 19 |
digestive gland | 2.26e-10 | 19 |
liver bud | 2.26e-10 | 19 |
epithelium of foregut-midgut junction | 5.31e-09 | 25 |
anatomical boundary | 5.31e-09 | 25 |
hepatobiliary system | 5.31e-09 | 25 |
foregut-midgut junction | 5.31e-09 | 25 |
septum transversum | 5.31e-09 | 25 |
epithelial sac | 8.69e-09 | 25 |
hepatic diverticulum | 1.22e-08 | 22 |
liver primordium | 1.22e-08 | 22 |
sac | 2.38e-08 | 26 |
digestive tract diverticulum | 3.65e-08 | 23 |
gut epithelium | 6.55e-07 | 54 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.