FFCP PHASE1:Hg19::chr12:20522183..20522203,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5139|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8778|TSSclassifier=S|UniProt=Q14432|association_with_transcript=0bp_to_uc001reh.1_5end|coexpression_cluster_id=C2200|description=CAGE_peak_9_at_PDE3A_5end|id=chr12:20522183..20522203,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000097;1.86e-10;5!CL:0002591;8.23e-07;1|ontology_enrichment_celltype_v019_2=CL:0000097,4.27e-10,5;CL:0002028,4.27e-10,5|ontology_enrichment_development_v019=UBERON:0005062;3.18e-13;4!UBERON:0007284;3.18e-13;4!UBERON:0008947;6.90e-09;29!UBERON:0006215;2.90e-08;3!UBERON:0010226;2.57e-07;1!UBERON:0004140;8.23e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;1.62e-12;2!DOID:178;8.23e-07;1!DOID:326;8.23e-07;1!DOID:3978;8.23e-07;1!DOID:3394;8.23e-07;1!DOID:5844;8.23e-07;1|ontology_enrichment_disease_v019_2=DOID:114,9.95e-13,2;DOID:178,5.06e-07,1;DOID:326,5.06e-07,1;DOID:3978,5.06e-07,1;DOID:3394,5.06e-07,1;DOID:5844,5.06e-07,1;DOID:1287,9.01e-07,4|ontology_enrichment_uberon=UBERON:0007023!1.27e-17!115;UBERON:0001737!5.88e-11!9;UBERON:0000477!9.61e-10!286;UBERON:0000468!1.69e-08!659;UBERON:0002346!1.94e-08!90;UBERON:0000064!3.36e-08!219;UBERON:0003075!5.63e-08!86;UBERON:0007284!5.63e-08!86;UBERON:0000025!9.90e-08!194;UBERON:0007100!9.99e-08!27;UBERON:0001557!1.60e-07!19;UBERON:0000481!2.13e-07!347;UBERON:0000063!2.96e-07!97;UBERON:0002616!7.70e-07!59|ontology_enrichment_uberon_v019=UBERON:0001737;1.73e-22;9!UBERON:0001557;1.73e-22;9!UBERON:0003978;1.90e-17;3!UBERON:0000946;1.90e-17;3!UBERON:0007100;2.84e-13;25!UBERON:0002133;2.41e-12;2!UBERON:0010313;4.13e-09;10!UBERON:0004151;7.62e-09;3!UBERON:0002084;2.57e-07;1!UBERON:0002082;2.57e-07;1!UBERON:0002134;3.36e-07;1!UBERON:0005208;3.36e-07;1!UBERON:0004145;3.36e-07;1!UBERON:0005946;3.36e-07;1!UBERON:0005965;3.36e-07;1!UBERON:0002078;3.36e-07;1!UBERON:0002135;8.23e-07;1!UBERON:0002146;8.23e-07;1!UBERON:0005623;8.23e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.09e-22,9;UBERON:0003978,5.80e-18,3;UBERON:0009751,5.80e-18,3;UBERON:0000946,5.80e-18,3;UBERON:0002523,5.80e-18,3;UBERON:0005983,5.80e-18,3;UBERON:0002165,5.80e-18,3;UBERON:0002062,5.80e-18,3;UBERON:0007280,5.80e-18,3;UBERON:0007100,1.50e-15,27;UBERON:0001557,6.91e-14,19;UBERON:0002133,1.41e-12,2;UBERON:0010313,3.16e-09,10;UBERON:0002342,3.16e-09,10;UBERON:0005062,3.16e-09,10;UBERON:0004151,7.49e-09,3;UBERON:0004145,2.24e-08,3;UBERON:0004797,5.70e-08,7;UBERON:0000948,5.90e-08,24;UBERON:0005498,5.90e-08,24;UBERON:0004140,5.90e-08,24;UBERON:0009881,5.90e-08,24;UBERON:0004141,5.90e-08,24;UBERON:0003084,5.90e-08,24;UBERON:0007005,5.90e-08,24;UBERON:0004139,5.90e-08,24;UBERON:0004291,5.90e-08,24;UBERON:0002084,2.50e-07,1;UBERON:0002082,2.50e-07,1;UBERON:0010226,2.50e-07,1;UBERON:0002134,3.36e-07,1;UBERON:0005208,3.36e-07,1;UBERON:0005946,3.36e-07,1;UBERON:0005965,3.36e-07,1;UBERON:0002078,3.36e-07,1;UBERON:0002146,4.25e-07,1;UBERON:0005623,4.25e-07,1;UBERON:0002135,4.78e-07,1|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0.662794751455832,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0.289693037921647,0,0.973269740605272,0.283604451492204,0.443458794925128,0.351339142772504,0.196468613246569,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.625098097988558,0,0.450445921933289,1.53316637465883,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0.576175924479999,0,0,0,0,0,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0.772921620136887,0,0,0,0,0,0.646584227275248,0.355009592516614,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,1.77460200059766,2.19160097101532,0.964044119533928,2.64705534557745,3.26819166138609,2.13543557199987,1.21348177344148,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.968532774145487,1.03664057770386,1.15295962733569,1.13618190083742,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0.266422179016099,0.857867961948885,0,0,0.325736184293735,0.710783897485092,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.391602314925481,0,0,0,0,0,0,0.907170879989041,0.248107807818777,0.306923946576125,0,0,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.10555162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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5139 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8778 | |||
|TSSclassifier=S | |||
|UniProt=Q14432 | |||
|association_with_transcript=0bp_to_uc001reh.1_5end | |||
|coexpression_cluster_id=C2200 | |||
|description=CAGE_peak_9_at_PDE3A_5end | |||
|id=chr12:20522183..20522203,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.86e-10;5!CL:0002591;8.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.27e-10,5;CL:0002028,4.27e-10,5 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.18e-13;4!UBERON:0007284;3.18e-13;4!UBERON:0008947;6.90e-09;29!UBERON:0006215;2.90e-08;3!UBERON:0010226;2.57e-07;1!UBERON:0004140;8.23e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.62e-12;2!DOID:178;8.23e-07;1!DOID:326;8.23e-07;1!DOID:3978;8.23e-07;1!DOID:3394;8.23e-07;1!DOID:5844;8.23e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.95e-13,2;DOID:178,5.06e-07,1;DOID:326,5.06e-07,1;DOID:3978,5.06e-07,1;DOID:3394,5.06e-07,1;DOID:5844,5.06e-07,1;DOID:1287,9.01e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.27e-17!115;UBERON:0001737!5.88e-11!9;UBERON:0000477!9.61e-10!286;UBERON:0000468!1.69e-08!659;UBERON:0002346!1.94e-08!90;UBERON:0000064!3.36e-08!219;UBERON:0003075!5.63e-08!86;UBERON:0007284!5.63e-08!86;UBERON:0000025!9.90e-08!194;UBERON:0007100!9.99e-08!27;UBERON:0001557!1.60e-07!19;UBERON:0000481!2.13e-07!347;UBERON:0000063!2.96e-07!97;UBERON:0002616!7.70e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.73e-22;9!UBERON:0001557;1.73e-22;9!UBERON:0003978;1.90e-17;3!UBERON:0000946;1.90e-17;3!UBERON:0007100;2.84e-13;25!UBERON:0002133;2.41e-12;2!UBERON:0010313;4.13e-09;10!UBERON:0004151;7.62e-09;3!UBERON:0002084;2.57e-07;1!UBERON:0002082;2.57e-07;1!UBERON:0002134;3.36e-07;1!UBERON:0005208;3.36e-07;1!UBERON:0004145;3.36e-07;1!UBERON:0005946;3.36e-07;1!UBERON:0005965;3.36e-07;1!UBERON:0002078;3.36e-07;1!UBERON:0002135;8.23e-07;1!UBERON:0002146;8.23e-07;1!UBERON:0005623;8.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.09e-22,9;UBERON:0003978,5.80e-18,3;UBERON:0009751,5.80e-18,3;UBERON:0000946,5.80e-18,3;UBERON:0002523,5.80e-18,3;UBERON:0005983,5.80e-18,3;UBERON:0002165,5.80e-18,3;UBERON:0002062,5.80e-18,3;UBERON:0007280,5.80e-18,3;UBERON:0007100,1.50e-15,27;UBERON:0001557,6.91e-14,19;UBERON:0002133,1.41e-12,2;UBERON:0010313,3.16e-09,10;UBERON:0002342,3.16e-09,10;UBERON:0005062,3.16e-09,10;UBERON:0004151,7.49e-09,3;UBERON:0004145,2.24e-08,3;UBERON:0004797,5.70e-08,7;UBERON:0000948,5.90e-08,24;UBERON:0005498,5.90e-08,24;UBERON:0004140,5.90e-08,24;UBERON:0009881,5.90e-08,24;UBERON:0004141,5.90e-08,24;UBERON:0003084,5.90e-08,24;UBERON:0007005,5.90e-08,24;UBERON:0004139,5.90e-08,24;UBERON:0004291,5.90e-08,24;UBERON:0002084,2.50e-07,1;UBERON:0002082,2.50e-07,1;UBERON:0010226,2.50e-07,1;UBERON:0002134,3.36e-07,1;UBERON:0005208,3.36e-07,1;UBERON:0005946,3.36e-07,1;UBERON:0005965,3.36e-07,1;UBERON:0002078,3.36e-07,1;UBERON:0002146,4.25e-07,1;UBERON:0005623,4.25e-07,1;UBERON:0002135,4.78e-07,1 | |||
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| |||
|short_description=p9@PDE3A | |||
}} |
Revision as of 22:05, 10 September 2013
Short description: | p9@PDE3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_PDE3A_5end |
Coexpression cluster: | C2200_left_heart_epitheloid_Hep2_cervical_small_large |
Association with transcript: | 0bp_to_uc001reh.1_5end |
EntrezGene: | PDE3A |
HGNC: | 8778 |
UniProt: | Q14432 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.27e-10 | 5 |
basophil mast progenitor cell | 4.27e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.95e-13 | 2 |
vascular disease | 5.06e-07 | 1 |
ischemia | 5.06e-07 | 1 |
extrinsic cardiomyopathy | 5.06e-07 | 1 |
myocardial ischemia | 5.06e-07 | 1 |
myocardial infarction | 5.06e-07 | 1 |
cardiovascular system disease | 9.01e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.