FFCP PHASE1:Hg19::chr12:53200984..53200997,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C60|description=CAGE_peak_at_chr12:53200984..53200997,-|id=chr12:53200984..53200997,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0009143;6.62e-41;1!UBERON:0008814;6.30e-21;2!UBERON:0010056;6.30e-21;2|ontology_enrichment_disease=DOID:3151!5.85e-14!1;DOID:3149!5.85e-14!1;DOID:3451!1.28e-07!2;DOID:4159!1.28e-07!2;DOID:0060122!1.28e-07!2;DOID:3910!1.45e-07!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003127!1.85e-25!2;UBERON:0001723!6.52e-18!3;UBERON:0001033!6.52e-18!3;UBERON:0010056!6.52e-18!3;UBERON:0007196!2.31e-14!14;UBERON:0001558!2.31e-14!14;UBERON:0002372!4.53e-14!1;UBERON:0001961!4.53e-14!1;UBERON:0001744!4.53e-14!1;UBERON:0001735!4.53e-14!1;UBERON:0007029!8.58e-14!1;UBERON:0000014!1.72e-13!4;UBERON:0002581!2.07e-13!1;UBERON:0000072!1.01e-12!46;UBERON:0001042!4.82e-12!10;UBERON:0009145!4.82e-12!10;UBERON:0006562!5.33e-11!11;UBERON:0000065!5.77e-11!53;UBERON:0000002!3.28e-09!6;UBERON:0001560!3.28e-09!6;UBERON:0005178!4.21e-09!34;UBERON:0002224!4.21e-09!34;UBERON:0005181!7.71e-09!35;UBERON:0003126!5.87e-08!7;UBERON:0001005!5.87e-08!7;UBERON:0001004!6.54e-08!72;UBERON:0000341!9.87e-08!2;UBERON:0004903!1.45e-07!2;UBERON:0002173!1.45e-07!2;UBERON:0002186!1.45e-07!2;UBERON:0001041!2.33e-07!98;UBERON:0000078!6.41e-07!18;UBERON:0000077!9.73e-07!130;UBERON:0004921!9.73e-07!129;UBERON:0004185!9.73e-07!129|ontology_enrichment_uberon_v019=UBERON:0001723;4.28e-53;3!UBERON:0001033;4.28e-53;3!UBERON:0002372;2.70e-40;1!UBERON:0001961;2.70e-40;1!UBERON:0001744;2.70e-40;1!UBERON:0001042;2.70e-40;1!UBERON:0001735;2.70e-40;1!UBERON:0000341;3.81e-21;2!UBERON:0006562;6.30e-21;2!UBERON:0001043;1.22e-14;3!UBERON:0000165;1.74e-13;28!UBERON:0000974;5.92e-08;6!UBERON:0000020;6.86e-08;23!UBERON:0001032;1.34e-07;24!UBERON:0004456;1.34e-07;24!UBERON:0000153;1.99e-07;54|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.89e-53,3;UBERON:0001033,4.89e-53,3;UBERON:0010056,4.89e-53,3;UBERON:0002372,2.21e-40,1;UBERON:0001961,2.21e-40,1;UBERON:0001744,2.21e-40,1;UBERON:0001735,2.21e-40,1;UBERON:0001042,4.93e-36,10;UBERON:0009145,4.93e-36,10;UBERON:0006562,7.42e-33,11;UBERON:0000341,3.81e-21,2;UBERON:0001557,1.91e-19,19;UBERON:0000166,6.38e-17,22;UBERON:0001043,1.22e-14,3;UBERON:0009143,1.22e-14,3;UBERON:0000165,4.73e-13,29;UBERON:0000930,4.73e-13,29;UBERON:0000153,7.02e-11,62;UBERON:0007811,7.02e-11,62;UBERON:0000161,1.12e-10,36;UBERON:0008814,8.47e-10,18;UBERON:0000072,2.33e-08,47;UBERON:0001444,4.76e-08,49;UBERON:0001041,6.09e-08,87;UBERON:0000020,1.36e-07,24;UBERON:0001032,1.36e-07,24;UBERON:0004456,1.36e-07,24;UBERON:0000065,2.27e-07,54;UBERON:0000033,3.92e-07,56|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5483524732629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.18378547512845,0,0,0,0,0,0,4.35433495793923,5.4757328173645,4.51258755197736,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:53200984..53200997,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr12:53200984..53200997,- | |||
|id=chr12:53200984..53200997,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.62e-41;1!UBERON:0008814;6.30e-21;2!UBERON:0010056;6.30e-21;2 | |||
|ontology_enrichment_disease=DOID:3151!5.85e-14!1;DOID:3149!5.85e-14!1;DOID:3451!1.28e-07!2;DOID:4159!1.28e-07!2;DOID:0060122!1.28e-07!2;DOID:3910!1.45e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.85e-25!2;UBERON:0001723!6.52e-18!3;UBERON:0001033!6.52e-18!3;UBERON:0010056!6.52e-18!3;UBERON:0007196!2.31e-14!14;UBERON:0001558!2.31e-14!14;UBERON:0002372!4.53e-14!1;UBERON:0001961!4.53e-14!1;UBERON:0001744!4.53e-14!1;UBERON:0001735!4.53e-14!1;UBERON:0007029!8.58e-14!1;UBERON:0000014!1.72e-13!4;UBERON:0002581!2.07e-13!1;UBERON:0000072!1.01e-12!46;UBERON:0001042!4.82e-12!10;UBERON:0009145!4.82e-12!10;UBERON:0006562!5.33e-11!11;UBERON:0000065!5.77e-11!53;UBERON:0000002!3.28e-09!6;UBERON:0001560!3.28e-09!6;UBERON:0005178!4.21e-09!34;UBERON:0002224!4.21e-09!34;UBERON:0005181!7.71e-09!35;UBERON:0003126!5.87e-08!7;UBERON:0001005!5.87e-08!7;UBERON:0001004!6.54e-08!72;UBERON:0000341!9.87e-08!2;UBERON:0004903!1.45e-07!2;UBERON:0002173!1.45e-07!2;UBERON:0002186!1.45e-07!2;UBERON:0001041!2.33e-07!98;UBERON:0000078!6.41e-07!18;UBERON:0000077!9.73e-07!130;UBERON:0004921!9.73e-07!129;UBERON:0004185!9.73e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;4.28e-53;3!UBERON:0001033;4.28e-53;3!UBERON:0002372;2.70e-40;1!UBERON:0001961;2.70e-40;1!UBERON:0001744;2.70e-40;1!UBERON:0001042;2.70e-40;1!UBERON:0001735;2.70e-40;1!UBERON:0000341;3.81e-21;2!UBERON:0006562;6.30e-21;2!UBERON:0001043;1.22e-14;3!UBERON:0000165;1.74e-13;28!UBERON:0000974;5.92e-08;6!UBERON:0000020;6.86e-08;23!UBERON:0001032;1.34e-07;24!UBERON:0004456;1.34e-07;24!UBERON:0000153;1.99e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.89e-53,3;UBERON:0001033,4.89e-53,3;UBERON:0010056,4.89e-53,3;UBERON:0002372,2.21e-40,1;UBERON:0001961,2.21e-40,1;UBERON:0001744,2.21e-40,1;UBERON:0001735,2.21e-40,1;UBERON:0001042,4.93e-36,10;UBERON:0009145,4.93e-36,10;UBERON:0006562,7.42e-33,11;UBERON:0000341,3.81e-21,2;UBERON:0001557,1.91e-19,19;UBERON:0000166,6.38e-17,22;UBERON:0001043,1.22e-14,3;UBERON:0009143,1.22e-14,3;UBERON:0000165,4.73e-13,29;UBERON:0000930,4.73e-13,29;UBERON:0000153,7.02e-11,62;UBERON:0007811,7.02e-11,62;UBERON:0000161,1.12e-10,36;UBERON:0008814,8.47e-10,18;UBERON:0000072,2.33e-08,47;UBERON:0001444,4.76e-08,49;UBERON:0001041,6.09e-08,87;UBERON:0000020,1.36e-07,24;UBERON:0001032,1.36e-07,24;UBERON:0004456,1.36e-07,24;UBERON:0000065,2.27e-07,54;UBERON:0000033,3.92e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5483524732629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.18378547512845,0,0,0,0,0,0,4.35433495793923,5.4757328173645,4.51258755197736,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:53200984..53200997,- | |||
}} |
Revision as of 23:13, 10 September 2013
Short description: | p@chr12:53200984..53200997, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:53200984..53200997, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 4.89e-53 | 3 |
gustatory system | 4.89e-53 | 3 |
future tongue | 4.89e-53 | 3 |
tonsil | 2.21e-40 | 1 |
mucosa-associated lymphoid tissue | 2.21e-40 | 1 |
lymphoid tissue | 2.21e-40 | 1 |
tonsillar ring | 2.21e-40 | 1 |
chordate pharynx | 4.93e-36 | 10 |
pharyngeal region of foregut | 4.93e-36 | 10 |
pharynx | 7.42e-33 | 11 |
throat | 3.81e-21 | 2 |
upper respiratory tract | 1.91e-19 | 19 |
oral opening | 6.38e-17 | 22 |
esophagus | 1.22e-14 | 3 |
esophageal region | 1.22e-14 | 3 |
mouth | 4.73e-13 | 29 |
stomodeum | 4.73e-13 | 29 |
anterior region of body | 7.02e-11 | 62 |
craniocervical region | 7.02e-11 | 62 |
orifice | 1.12e-10 | 36 |
pharyngeal arch system | 8.47e-10 | 18 |
segment of respiratory tract | 2.33e-08 | 47 |
subdivision of head | 4.76e-08 | 49 |
foregut | 6.09e-08 | 87 |
sense organ | 1.36e-07 | 24 |
sensory system | 1.36e-07 | 24 |
entire sense organ system | 1.36e-07 | 24 |
respiratory tract | 2.27e-07 | 54 |
head | 3.92e-07 | 56 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.